RNA–Protein interactions for RNA: ENST00000515943.1

RNU4-29P-201, Transcript of RNA, U4 small nuclear 29, pseudogene, humanhuman

BASIC

Gene RNU4-29P, Length 174 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-29P-201ENST00000515943 RPL12P30050 165 aaKnown RBP1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 CDC34P49427 236 aaPredicted RBP1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 MEF2BQ02080 365 aaPredicted RBP1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 KRTAP19-2Q3LHN2 52 aa1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 KRTAP13-2Q52LG2 175 aa1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 TMEM97Q5BJF2 176 aa1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 C9orf116Q5BN46 136 aaPredicted RBP1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 FAM162BQ5T6X4 162 aa1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 Q5W150 140 aa1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 TRIQKQ629K1 86 aa1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 PHF5AQ7RTV0 110 aaKnown RBP1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 PPP1R1CQ8WVI7 109 aa1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 AQP10Q96PS8 301 aa1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 SMIM3Q9BZL3 60 aa1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 MED28Q9H204 178 aa1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 LINC00474Q9P2X8 69 aa1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 ZFP30Q9Y2G7 519 aa1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 PHLDA3Q9Y5J5 127 aa1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 MUC12Q9UKN1 5478 aa1.54□□□□□ -2.16
RNU4-29P-201ENST00000515943 TRAV26-2A0A0B4J265 109 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 A0A1W2PPV4 95 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 CENPXA8MT69 81 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 K7EQM0 130 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 OR5AL1P0C617 328 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 IGLC6P0CF74 106 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 ATP6V0CP27449 155 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 S100A5P33763 92 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 UBE2AP49459 152 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 DEFA3P59666 94 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 CACNG7P62955 275 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 ZNF56Q15929 161 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 C1orf137Q5JT78 98 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 Q6ZN92 141 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 FER1L6-AS1Q8NA97 138 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 NUP35Q8NFH5 326 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 DIRC1Q969H9 104 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 HIST1H2BAQ96A08 127 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 CARD19Q96LW7 228 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 TMEM243Q9BU79 118 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 RPP21Q9H633 154 aaKnown RBP1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 TMEM167BQ9NRX6 74 aa1.53□□□□□ -2.16
RNU4-29P-201ENST00000515943 IGHV1-58A0A0C4DH39 117 aa1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 LINC00959A0A1B0GUT2 108 aa1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 CXorf1O96002 111 aa1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 MT-ND6P03923 174 aa1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 BCL2P10415 239 aa1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 NTF3P20783 257 aa1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 NKX2-5P52952 324 aaPredicted RBP1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 UBE2G2P60604 165 aa1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 IFITM3Q01628 133 aa1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 SYCNQ0VAF6 134 aa1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 TPRXLQ17RH7 258 aa1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 SLC25A34Q6PIV7 304 aa1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 SCGB1C1Q8TD33 95 aa1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 FMC1Q96HJ9 113 aa1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 PSMG3Q9BT73 122 aaPredicted RBP1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 TNFSF18Q9UNG2 199 aa1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 CARHSP1Q9Y2V2 147 aaKnown RBP1.52□□□□□ -2.17
RNU4-29P-201ENST00000515943 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 IGKV3OR2-268A0A0C4DH90 116 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 LOC107984640A0A0U1RRK4 108 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 CTXND1A0A1B0GTU2 59 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 FAM240BA0A1B0GVZ2 78 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 IGKV2-29A2NJV5 120 aaPredicted RBP1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 C19orf71A6NCJ1 209 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 CCDC160A6NGH7 325 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 CCL25O15444 150 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 NOL3O60936 208 aaKnown RBP1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 APOMO95445 188 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 TSPAN13O95857 204 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 TLX1NBP0CAT3 122 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 FGF6P10767 208 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 ESDP10768 282 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 XCL1P47992 114 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 SULT1A2P50226 295 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 SERF2P84101 59 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 Q5BKY6 102 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 SPANXN1Q5VSR9 72 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 RASL11AQ6T310 242 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 GATD1Q8NB37 220 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 OR5A1Q8NGJ0 315 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 AP1S3Q96PC3 154 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 MARVELD1Q9BSK0 173 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 CCDC32Q9BV29 185 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 ACTR3CQ9C0K3 210 aaPredicted RBP1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 NIT2Q9NQR4 276 aa1.51□□□□□ -2.17
RNU4-29P-201ENST00000515943 INMT-MINDY4F8WBC2 141 aa1.5□□□□□ -2.17
RNU4-29P-201ENST00000515943 G3V3Q6 166 aa1.5□□□□□ -2.17
RNU4-29P-201ENST00000515943 MBP02144 154 aa1.5□□□□□ -2.17
RNU4-29P-201ENST00000515943 MGPP08493 103 aa1.5□□□□□ -2.17
RNU4-29P-201ENST00000515943 RPL13AP40429 203 aaKnown RBP1.5□□□□□ -2.17
RNU4-29P-201ENST00000515943 FOXA3P55318 350 aaPredicted RBP1.5□□□□□ -2.17
RNU4-29P-201ENST00000515943 UBE2G1P62253 170 aa1.5□□□□□ -2.17
RNU4-29P-201ENST00000515943 MT1HP80294 61 aa1.5□□□□□ -2.17
RNU4-29P-201ENST00000515943 COTL1Q14019 142 aa1.5□□□□□ -2.17
RNU4-29P-201ENST00000515943 SS18Q15532 418 aa1.5□□□□□ -2.17
RNU4-29P-201ENST00000515943 ASB16-AS1Q495Z4 193 aa1.5□□□□□ -2.17
RNU4-29P-201ENST00000515943 RPL7L1Q6DKI1 246 aaKnown RBP1.5□□□□□ -2.17
RNU4-29P-201ENST00000515943 BAGE2Q86Y30 109 aa1.5□□□□□ -2.17
RNU4-29P-201ENST00000515943 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms