RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 HIST1H2BKO60814 126 aa10.12□□□□□ -0.79
POLR2J3-218ENST00000513506 HIST1H2BJP06899 126 aa10.12□□□□□ -0.79
POLR2J3-218ENST00000513506 HIST1H2BOP23527 126 aa10.12□□□□□ -0.79
POLR2J3-218ENST00000513506 HIST1H2BBP33778 126 aa10.12□□□□□ -0.79
POLR2J3-218ENST00000513506 HIST1H2BDP58876 126 aa10.12□□□□□ -0.79
POLR2J3-218ENST00000513506 HIST1H2BCP62807 126 aa10.12□□□□□ -0.79
POLR2J3-218ENST00000513506 HIST2H2BEQ16778 126 aa10.12□□□□□ -0.79
POLR2J3-218ENST00000513506 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.12□□□□□ -0.79
POLR2J3-218ENST00000513506 HIST1H2BHQ93079 126 aa10.12□□□□□ -0.79
POLR2J3-218ENST00000513506 HIST1H2BNQ99877 126 aa10.12□□□□□ -0.79
POLR2J3-218ENST00000513506 HIST1H2BMQ99879 126 aa10.12□□□□□ -0.79
POLR2J3-218ENST00000513506 CST9LQ9H4G1 147 aa10.12□□□□□ -0.79
POLR2J3-218ENST00000513506 A0A087WZ39 114 aa10.11□□□□□ -0.79
POLR2J3-218ENST00000513506 C16orf90A8MZG2 172 aa10.11□□□□□ -0.79
POLR2J3-218ENST00000513506 ATP5LO75964 103 aa10.11□□□□□ -0.79
POLR2J3-218ENST00000513506 SEC11AP67812 179 aa10.11□□□□□ -0.79
POLR2J3-218ENST00000513506 COA6Q5JTJ3 125 aaKnown RBP10.11□□□□□ -0.79
POLR2J3-218ENST00000513506 KIAA1109Q2LD37 5005 aa10.1□□□□□ -0.79
POLR2J3-218ENST00000513506 IGLV5-52A0A0A0MRZ9 124 aa10.1□□□□□ -0.79
POLR2J3-218ENST00000513506 SERF1AO75920 110 aa10.1□□□□□ -0.79
POLR2J3-218ENST00000513506 PMVKQ15126 192 aa10.1□□□□□ -0.79
POLR2J3-218ENST00000513506 ZC2HC1BQ5TFG8 222 aa10.1□□□□□ -0.79
POLR2J3-218ENST00000513506 IGLV5-45A0A087WSX0 123 aa10.09□□□□□ -0.79
POLR2J3-218ENST00000513506 HSBP1O75506 76 aa10.09□□□□□ -0.79
POLR2J3-218ENST00000513506 SLPIP03973 132 aa10.09□□□□□ -0.79
POLR2J3-218ENST00000513506 GCSHP23434 173 aa10.09□□□□□ -0.79
POLR2J3-218ENST00000513506 COX6A2Q02221 97 aa10.09□□□□□ -0.79
POLR2J3-218ENST00000513506 PMCHL1Q16048 86 aa10.09□□□□□ -0.79
POLR2J3-218ENST00000513506 APOBP04114 4563 aaKnown RBP10.09□□□□□ -0.79
POLR2J3-218ENST00000513506 IGHV3-64A0A075B6Q5 118 aa10.08□□□□□ -0.8
POLR2J3-218ENST00000513506 TINCRA0A1B0GVN0 87 aa10.08□□□□□ -0.8
POLR2J3-218ENST00000513506 NUPR1O60356 82 aa10.08□□□□□ -0.8
POLR2J3-218ENST00000513506 HERVK_113P63121 156 aa10.08□□□□□ -0.8
POLR2J3-218ENST00000513506 C9orf163Q8N9P6 203 aa10.08□□□□□ -0.8
POLR2J3-218ENST00000513506 OR10D4PQ8NGN7 298 aa10.08□□□□□ -0.8
POLR2J3-218ENST00000513506 hDV102S1A0JD36 115 aa10.07□□□□□ -0.8
POLR2J3-218ENST00000513506 C5orf38Q86SI9 138 aa10.07□□□□□ -0.8
POLR2J3-218ENST00000513506 RYR1P21817 5038 aa10.06□□□□□ -0.8
POLR2J3-218ENST00000513506 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.06□□□□□ -0.8
POLR2J3-218ENST00000513506 F8WDY8 70 aa10.06□□□□□ -0.8
POLR2J3-218ENST00000513506 APOMO95445 188 aa10.06□□□□□ -0.8
POLR2J3-218ENST00000513506 KRTAP10-1P60331 282 aa10.06□□□□□ -0.8
POLR2J3-218ENST00000513506 PACRGQ96M98 296 aaPredicted RBP10.06□□□□□ -0.8
POLR2J3-218ENST00000513506 TRAV12-1A0A0B4J245 112 aa10.05□□□□□ -0.8
POLR2J3-218ENST00000513506 A0A0J9YXV3 536 aa10.05□□□□□ -0.8
POLR2J3-218ENST00000513506 CDK2AP2O75956 126 aa10.05□□□□□ -0.8
POLR2J3-218ENST00000513506 IGLC3P0DOY3 106 aa10.05□□□□□ -0.8
POLR2J3-218ENST00000513506 MALP21145 153 aa10.05□□□□□ -0.8
POLR2J3-218ENST00000513506 FUSP35637 526 aaKnown RBP eCLIP10.05□□□□□ -0.8
POLR2J3-218ENST00000513506 Q6ZSA8 131 aa10.05□□□□□ -0.8
POLR2J3-218ENST00000513506 FAM19A2Q8N3H0 131 aa10.05□□□□□ -0.8
POLR2J3-218ENST00000513506 IFI27L1Q96BM0 104 aa10.05□□□□□ -0.8
POLR2J3-218ENST00000513506 C2orf48Q96LS8 159 aa10.05□□□□□ -0.8
POLR2J3-218ENST00000513506 KIAA0087Q14695 138 aa10.04□□□□□ -0.8
POLR2J3-218ENST00000513506 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.03□□□□□ -0.8
POLR2J3-218ENST00000513506 CDKN2A-AS1Q9UH64 79 aa10.03□□□□□ -0.8
POLR2J3-218ENST00000513506 IGLV4-69A0A075B6H9 119 aa10.02□□□□□ -0.81
POLR2J3-218ENST00000513506 ZNF561-AS1K7EIQ3 104 aa10.02□□□□□ -0.81
POLR2J3-218ENST00000513506 LEPROTL1O95214 131 aa10.02□□□□□ -0.81
POLR2J3-218ENST00000513506 HIGD2BQ4VC39 106 aa10.02□□□□□ -0.81
POLR2J3-218ENST00000513506 SDIM1Q6ZPB5 146 aa10.02□□□□□ -0.81
POLR2J3-218ENST00000513506 GEMIN7Q9H840 131 aaKnown RBP10.02□□□□□ -0.81
POLR2J3-218ENST00000513506 HSPG2P98160 4391 aa10.02□□□□□ -0.81
POLR2J3-218ENST00000513506 RNF151Q2KHN1 245 aa10.01□□□□□ -0.81
POLR2J3-218ENST00000513506 HSPB8Q9UJY1 196 aa10.01□□□□□ -0.81
POLR2J3-218ENST00000513506 HERC2O95714 4834 aa10.01□□□□□ -0.81
POLR2J3-218ENST00000513506 SPAG11BQ08648 103 aa9.99□□□□□ -0.81
POLR2J3-218ENST00000513506 SYCNQ0VAF6 134 aa9.99□□□□□ -0.81
POLR2J3-218ENST00000513506 CIRBPQ14011 172 aaKnown RBP9.99□□□□□ -0.81
POLR2J3-218ENST00000513506 ORAOV1Q8WV07 137 aa9.99□□□□□ -0.81
POLR2J3-218ENST00000513506 IGLV5-39A0A0G2JS06 123 aa9.98□□□□□ -0.81
POLR2J3-218ENST00000513506 SMIM1B2RUZ4 78 aa9.98□□□□□ -0.81
POLR2J3-218ENST00000513506 Q8IZM0 81 aa9.98□□□□□ -0.81
POLR2J3-218ENST00000513506 LINC00469Q8N7U9 141 aa9.98□□□□□ -0.81
POLR2J3-218ENST00000513506 MRPL35Q9NZE8 188 aaKnown RBP9.98□□□□□ -0.81
POLR2J3-218ENST00000513506 F8VRH5 84 aa9.97□□□□□ -0.81
POLR2J3-218ENST00000513506 ZNF22P17026 224 aaPredicted RBP9.97□□□□□ -0.81
POLR2J3-218ENST00000513506 XGP55808 180 aa9.97□□□□□ -0.81
POLR2J3-218ENST00000513506 NDUFA6P56556 154 aa9.97□□□□□ -0.81
POLR2J3-218ENST00000513506 ODF1Q14990 250 aa9.97□□□□□ -0.81
POLR2J3-218ENST00000513506 LINC00526Q96FQ7 95 aa9.97□□□□□ -0.81
POLR2J3-218ENST00000513506 CARD19Q96LW7 228 aa9.97□□□□□ -0.81
POLR2J3-218ENST00000513506 CHAC1Q9BUX1 264 aa9.97□□□□□ -0.81
POLR2J3-218ENST00000513506 FAM30AQ9NZY2 134 aa9.97□□□□□ -0.81
POLR2J3-218ENST00000513506 CHTOPQ9Y3Y2 248 aaKnown RBP9.97□□□□□ -0.81
POLR2J3-218ENST00000513506 C11orf86A6NJI1 115 aa9.96□□□□□ -0.82
POLR2J3-218ENST00000513506 H3BRM9 83 aa9.96□□□□□ -0.82
POLR2J3-218ENST00000513506 LINC01620Q4KN68 170 aa9.96□□□□□ -0.82
POLR2J3-218ENST00000513506 PKIGQ9Y2B9 76 aa9.96□□□□□ -0.82
POLR2J3-218ENST00000513506 Q6ZRU5 148 aa9.95□□□□□ -0.82
POLR2J3-218ENST00000513506 CAMK2N2Q96S95 79 aa9.95□□□□□ -0.82
POLR2J3-218ENST00000513506 NDUFA1O15239 70 aa9.94□□□□□ -0.82
POLR2J3-218ENST00000513506 FABP4P15090 132 aa9.94□□□□□ -0.82
POLR2J3-218ENST00000513506 TRBV30A0A0K0K1B3 111 aa9.93□□□□□ -0.82
POLR2J3-218ENST00000513506 TLX1NBP0CAT3 122 aa9.93□□□□□ -0.82
POLR2J3-218ENST00000513506 CXCL5P42830 114 aa9.92□□□□□ -0.82
POLR2J3-218ENST00000513506 C6orf226Q5I0X4 101 aa9.92□□□□□ -0.82
POLR2J3-218ENST00000513506 C10orf25Q5T742 122 aa9.92□□□□□ -0.82
POLR2J3-218ENST00000513506 UNQ6190/PRO20217Q6UXQ8 127 aa9.92□□□□□ -0.82
POLR2J3-218ENST00000513506 MAP1LC3CQ9BXW4 147 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms