RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	TRAV12-1	A0A0B4J245	112 aa		10.42	□□□□□ -0.74
SH3TC1-223	ENST00000513495	USP17L23	D6RBM5	183 aa		10.42	□□□□□ -0.74
SH3TC1-223	ENST00000513495		H0Y8G0	127 aa		10.42	□□□□□ -0.74
SH3TC1-223	ENST00000513495	LECT2	O14960	151 aa		10.42	□□□□□ -0.74
SH3TC1-223	ENST00000513495	FAM19A3	Q7Z5A8	133 aa		10.42	□□□□□ -0.74
SH3TC1-223	ENST00000513495	MAPKAPK5-AS1	Q8N8E1	139 aa		10.42	□□□□□ -0.74
SH3TC1-223	ENST00000513495	HYDIN	Q4G0P3	5121 aa		10.41	□□□□□ -0.74
SH3TC1-223	ENST00000513495	IGHV1-58	A0A0C4DH39	117 aa		10.41	□□□□□ -0.74
SH3TC1-223	ENST00000513495		A0A0J9YXV3	536 aa		10.41	□□□□□ -0.74
SH3TC1-223	ENST00000513495	TINCR	A0A1B0GVN0	87 aa		10.41	□□□□□ -0.74
SH3TC1-223	ENST00000513495	LRCOL1	A6NCL2	159 aa		10.41	□□□□□ -0.74
SH3TC1-223	ENST00000513495	C5orf38	Q86SI9	138 aa		10.41	□□□□□ -0.74
SH3TC1-223	ENST00000513495	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.41	□□□□□ -0.74
SH3TC1-223	ENST00000513495	LINC00469	Q8N7U9	141 aa		10.4	□□□□□ -0.74
SH3TC1-223	ENST00000513495	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.39	□□□□□ -0.75
SH3TC1-223	ENST00000513495	hDV102S1	A0JD36	115 aa		10.39	□□□□□ -0.75
SH3TC1-223	ENST00000513495		H3BRM9	83 aa		10.39	□□□□□ -0.75
SH3TC1-223	ENST00000513495		Q8N814	137 aa		10.39	□□□□□ -0.75
SH3TC1-223	ENST00000513495	CHAC1	Q9BUX1	264 aa		10.39	□□□□□ -0.75
SH3TC1-223	ENST00000513495		A0A087WZ39	114 aa		10.38	□□□□□ -0.75
SH3TC1-223	ENST00000513495	LINC01561	Q8N1V8	128 aa		10.38	□□□□□ -0.75
SH3TC1-223	ENST00000513495		F8VRH5	84 aa		10.37	□□□□□ -0.75
SH3TC1-223	ENST00000513495	ZNF561-AS1	K7EIQ3	104 aa		10.37	□□□□□ -0.75
SH3TC1-223	ENST00000513495	IGLC3	P0DOY3	106 aa		10.37	□□□□□ -0.75
SH3TC1-223	ENST00000513495	COX6A2	Q02221	97 aa		10.37	□□□□□ -0.75
SH3TC1-223	ENST00000513495	NTN5	Q8WTR8	489 aa	Predicted RBP	10.37	□□□□□ -0.75
SH3TC1-223	ENST00000513495	SNRPE	P62304	92 aa	Known RBP	10.36	□□□□□ -0.75
SH3TC1-223	ENST00000513495	WFDC2	Q14508	124 aa		10.36	□□□□□ -0.75
SH3TC1-223	ENST00000513495	HIST3H2BB	Q8N257	126 aa		10.36	□□□□□ -0.75
SH3TC1-223	ENST00000513495	OR10D4P	Q8NGN7	298 aa		10.36	□□□□□ -0.75
SH3TC1-223	ENST00000513495	PGPEP1	Q9NXJ5	209 aa		10.36	□□□□□ -0.75
SH3TC1-223	ENST00000513495	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.35	□□□□□ -0.75
SH3TC1-223	ENST00000513495	SYS1-DBNDD2	H3BUS1	97 aa		10.35	□□□□□ -0.75
SH3TC1-223	ENST00000513495	PLN	P26678	52 aa		10.35	□□□□□ -0.75
SH3TC1-223	ENST00000513495	KRTDAP	P60985	99 aa		10.35	□□□□□ -0.75
SH3TC1-223	ENST00000513495	CDPF1	Q6NVV7	123 aa		10.35	□□□□□ -0.75
SH3TC1-223	ENST00000513495	C15orf56	Q8N910	161 aa		10.35	□□□□□ -0.75
SH3TC1-223	ENST00000513495	ORAOV1	Q8WV07	137 aa		10.35	□□□□□ -0.75
SH3TC1-223	ENST00000513495	MRPL35	Q9NZE8	188 aa	Known RBP	10.35	□□□□□ -0.75
SH3TC1-223	ENST00000513495	CDKN2A-AS1	Q9UH64	79 aa		10.35	□□□□□ -0.75
SH3TC1-223	ENST00000513495	IGLV4-69	A0A075B6H9	119 aa		10.34	□□□□□ -0.75
SH3TC1-223	ENST00000513495	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.34	□□□□□ -0.75
SH3TC1-223	ENST00000513495	IGHV3-64	A0A075B6Q5	118 aa		10.34	□□□□□ -0.75
SH3TC1-223	ENST00000513495	IGLV5-45	A0A087WSX0	123 aa		10.34	□□□□□ -0.75
SH3TC1-223	ENST00000513495	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.34	□□□□□ -0.75
SH3TC1-223	ENST00000513495	C20orf202	A1L168	122 aa		10.34	□□□□□ -0.75
SH3TC1-223	ENST00000513495	PRSS2	P07478	247 aa		10.34	□□□□□ -0.75
SH3TC1-223	ENST00000513495	ODF1	Q14990	250 aa		10.34	□□□□□ -0.75
SH3TC1-223	ENST00000513495	HIGD2B	Q4VC39	106 aa		10.34	□□□□□ -0.75
SH3TC1-223	ENST00000513495	TMEM170B	Q5T4T1	132 aa		10.34	□□□□□ -0.75
SH3TC1-223	ENST00000513495	PET117	Q6UWS5	81 aa		10.34	□□□□□ -0.75
SH3TC1-223	ENST00000513495	SPATA12	Q7Z6I5	190 aa		10.34	□□□□□ -0.75
SH3TC1-223	ENST00000513495	IGLV5-52	A0A0A0MRZ9	124 aa		10.33	□□□□□ -0.76
SH3TC1-223	ENST00000513495	C11orf86	A6NJI1	115 aa		10.33	□□□□□ -0.76
SH3TC1-223	ENST00000513495	SPAG11B	Q08648	103 aa		10.33	□□□□□ -0.76
SH3TC1-223	ENST00000513495	TMA7	Q9Y2S6	64 aa	Known RBP	10.33	□□□□□ -0.76
SH3TC1-223	ENST00000513495	C5orf52	A6NGY3	159 aa		10.32	□□□□□ -0.76
SH3TC1-223	ENST00000513495	DPM2	O94777	84 aa		10.32	□□□□□ -0.76
SH3TC1-223	ENST00000513495	AKR1D1	P51857	326 aa		10.32	□□□□□ -0.76
SH3TC1-223	ENST00000513495	HIST1H2BL	Q99880	126 aa		10.32	□□□□□ -0.76
SH3TC1-223	ENST00000513495		F8WDY8	70 aa		10.31	□□□□□ -0.76
SH3TC1-223	ENST00000513495	ZNF22	P17026	224 aa	Predicted RBP	10.31	□□□□□ -0.76
SH3TC1-223	ENST00000513495	TOMM7	Q9P0U1	55 aa		10.31	□□□□□ -0.76
SH3TC1-223	ENST00000513495		A0A1B0GVY2	172 aa		10.3	□□□□□ -0.76
SH3TC1-223	ENST00000513495	IGKC	P01834	107 aa		10.3	□□□□□ -0.76
SH3TC1-223	ENST00000513495	SPINK8	P0C7L1	97 aa		10.3	□□□□□ -0.76
SH3TC1-223	ENST00000513495	C3orf79	P0CE67	100 aa		10.3	□□□□□ -0.76
SH3TC1-223	ENST00000513495	C2orf48	Q96LS8	159 aa		10.3	□□□□□ -0.76
SH3TC1-223	ENST00000513495	SMIM1	B2RUZ4	78 aa		10.29	□□□□□ -0.76
SH3TC1-223	ENST00000513495	CKS1B	P61024	79 aa		10.29	□□□□□ -0.76
SH3TC1-223	ENST00000513495	HERVK_113	P61574	105 aa		10.29	□□□□□ -0.76
SH3TC1-223	ENST00000513495	CNBP	P62633	177 aa	Known RBP	10.29	□□□□□ -0.76
SH3TC1-223	ENST00000513495	C6orf226	Q5I0X4	101 aa		10.29	□□□□□ -0.76
SH3TC1-223	ENST00000513495	CAMK2N2	Q96S95	79 aa		10.29	□□□□□ -0.76
SH3TC1-223	ENST00000513495	SYCN	Q0VAF6	134 aa		10.28	□□□□□ -0.76
SH3TC1-223	ENST00000513495	LINC01545	Q5VT33	79 aa		10.28	□□□□□ -0.76
SH3TC1-223	ENST00000513495		Q8IZM0	81 aa		10.28	□□□□□ -0.76
SH3TC1-223	ENST00000513495	PMCHL2	Q9BQD1	86 aa		10.28	□□□□□ -0.76
SH3TC1-223	ENST00000513495	PKIG	Q9Y2B9	76 aa		10.28	□□□□□ -0.76
SH3TC1-223	ENST00000513495	NDUFA1	O15239	70 aa		10.27	□□□□□ -0.77
SH3TC1-223	ENST00000513495	CXCL5	P42830	114 aa		10.27	□□□□□ -0.77
SH3TC1-223	ENST00000513495	KRTAP10-2	P60368	255 aa		10.27	□□□□□ -0.77
SH3TC1-223	ENST00000513495	COX7B2	Q8TF08	81 aa		10.27	□□□□□ -0.77
SH3TC1-223	ENST00000513495	CARD19	Q96LW7	228 aa		10.27	□□□□□ -0.77
SH3TC1-223	ENST00000513495	C16orf90	A8MZG2	172 aa		10.26	□□□□□ -0.77
SH3TC1-223	ENST00000513495	LINC00526	Q96FQ7	95 aa		10.26	□□□□□ -0.77
SH3TC1-223	ENST00000513495	FRAS1	Q86XX4	4008 aa		10.26	□□□□□ -0.77
SH3TC1-223	ENST00000513495	TMEM223	A0PJW6	202 aa		10.25	□□□□□ -0.77
SH3TC1-223	ENST00000513495	GCSH	P23434	173 aa		10.25	□□□□□ -0.77
SH3TC1-223	ENST00000513495	DNAH2	Q9P225	4427 aa		10.25	□□□□□ -0.77
SH3TC1-223	ENST00000513495	SFTA2	Q6UW10	78 aa		10.24	□□□□□ -0.77
SH3TC1-223	ENST00000513495	DNAH10	Q8IVF4	4471 aa		10.24	□□□□□ -0.77
SH3TC1-223	ENST00000513495	IGLV5-39	A0A0G2JS06	123 aa		10.23	□□□□□ -0.77
SH3TC1-223	ENST00000513495	FUS	P35637	526 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
SH3TC1-223	ENST00000513495	KIAA0087	Q14695	138 aa		10.23	□□□□□ -0.77
SH3TC1-223	ENST00000513495	C9orf163	Q8N9P6	203 aa		10.23	□□□□□ -0.77
SH3TC1-223	ENST00000513495		Q6ZRU5	148 aa		10.22	□□□□□ -0.77
SH3TC1-223	ENST00000513495	DNAH17	Q9UFH2	4485 aa		10.21	□□□□□ -0.77
SH3TC1-223	ENST00000513495	TRBV30	A0A0K0K1B3	111 aa		10.21	□□□□□ -0.77
SH3TC1-223	ENST00000513495	SLPI	P03973	132 aa		10.21	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms