RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 KRTAP13-2Q52LG2 175 aa6.06□□□□□ -1.44
CLDND1-227ENST00000513452 C9orf129Q5T035 196 aaKnown RBP6.06□□□□□ -1.44
CLDND1-227ENST00000513452 NUDT10Q8NFP7 164 aa6.06□□□□□ -1.44
CLDND1-227ENST00000513452 NUDT11Q96G61 164 aa6.06□□□□□ -1.44
CLDND1-227ENST00000513452 PPDPFQ9H3Y8 114 aa6.06□□□□□ -1.44
CLDND1-227ENST00000513452 GNG13Q9P2W3 67 aa6.06□□□□□ -1.44
CLDND1-227ENST00000513452 CSDC2Q9Y534 153 aaKnown RBP6.06□□□□□ -1.44
CLDND1-227ENST00000513452 TRBV27A0A0K0K1C4 114 aa6.05□□□□□ -1.44
CLDND1-227ENST00000513452 RPL28P46779 137 aaKnown RBP6.05□□□□□ -1.44
CLDND1-227ENST00000513452 C21orf62-AS1Q17RA5 79 aa6.05□□□□□ -1.44
CLDND1-227ENST00000513452 FAM210AQ96ND0 272 aa6.05□□□□□ -1.44
CLDND1-227ENST00000513452 KRTAP4-1Q9BYQ7 146 aa6.05□□□□□ -1.44
CLDND1-227ENST00000513452 MANBALQ9NQG1 85 aa6.05□□□□□ -1.44
CLDND1-227ENST00000513452 BIN3Q9NQY0 253 aa6.05□□□□□ -1.44
CLDND1-227ENST00000513452 UMAD1C9J7I0 102 aa6.04□□□□□ -1.44
CLDND1-227ENST00000513452 ARPC5O15511 151 aa6.04□□□□□ -1.44
CLDND1-227ENST00000513452 H2AFB1P0C5Y9 115 aa6.04□□□□□ -1.44
CLDND1-227ENST00000513452 POLR2KP53803 58 aaKnown RBP6.04□□□□□ -1.44
CLDND1-227ENST00000513452 SMAGPQ0VAQ4 97 aa6.04□□□□□ -1.44
CLDND1-227ENST00000513452 IGHV3OR16-9A0A0B4J2B5 98 aa6.03□□□□□ -1.44
CLDND1-227ENST00000513452 NDUFC2-KCTD14E9PQ53 114 aa6.03□□□□□ -1.44
CLDND1-227ENST00000513452 ASB16-AS1Q495Z4 193 aa6.03□□□□□ -1.44
CLDND1-227ENST00000513452 BCE1O60756 84 aa6.02□□□□□ -1.45
CLDND1-227ENST00000513452 TRBV30A0A0K0K1B3 111 aa6.01□□□□□ -1.45
CLDND1-227ENST00000513452 LINC00242Q5T6M2 205 aa6.01□□□□□ -1.45
CLDND1-227ENST00000513452 C2orf82Q6UX34 121 aa6.01□□□□□ -1.45
CLDND1-227ENST00000513452 MED9Q9NWA0 146 aa6.01□□□□□ -1.45
CLDND1-227ENST00000513452 C22orf24Q9Y442 160 aa6.01□□□□□ -1.45
CLDND1-227ENST00000513452 SMKR1H3BMG3 65 aa6□□□□□ -1.45
CLDND1-227ENST00000513452 K7EN84 100 aa6□□□□□ -1.45
CLDND1-227ENST00000513452 VCYO14598 125 aa6□□□□□ -1.45
CLDND1-227ENST00000513452 PDE6DO43924 150 aa6□□□□□ -1.45
CLDND1-227ENST00000513452 KIAA0087Q14695 138 aa6□□□□□ -1.45
CLDND1-227ENST00000513452 LBHQ53QV2 105 aaPredicted RBP6□□□□□ -1.45
CLDND1-227ENST00000513452 LINC00337Q8N6G1 96 aa6□□□□□ -1.45
CLDND1-227ENST00000513452 LINC00469Q8N7U9 141 aa6□□□□□ -1.45
CLDND1-227ENST00000513452 PACRGQ96M98 296 aaPredicted RBP6□□□□□ -1.45
CLDND1-227ENST00000513452 TIMM21Q9BVV7 248 aa6□□□□□ -1.45
CLDND1-227ENST00000513452 IGKV2D-26A0A0A0MRZ7 120 aa5.99□□□□□ -1.45
CLDND1-227ENST00000513452 FAM229BQ4G0N7 80 aa5.99□□□□□ -1.45
CLDND1-227ENST00000513452 TMEM18Q96B42 140 aa5.99□□□□□ -1.45
CLDND1-227ENST00000513452 KIR2DL4Q99706 377 aa5.99□□□□□ -1.45
CLDND1-227ENST00000513452 TGIF2-C20orf24A0A0A6YYL0 155 aa5.98□□□□□ -1.45
CLDND1-227ENST00000513452 IFITM10A6NMD0 228 aa5.98□□□□□ -1.45
CLDND1-227ENST00000513452 RAB4AP20338 218 aa5.98□□□□□ -1.45
CLDND1-227ENST00000513452 RPL39P62891 51 aaKnown RBP5.98□□□□□ -1.45
CLDND1-227ENST00000513452 MRPL55Q7Z7F7 128 aaKnown RBP5.98□□□□□ -1.45
CLDND1-227ENST00000513452 AMN1Q8IY45 258 aa5.98□□□□□ -1.45
CLDND1-227ENST00000513452 FAM104AQ969W3 186 aa5.98□□□□□ -1.45
CLDND1-227ENST00000513452 BORCS7Q96B45 105 aa5.98□□□□□ -1.45
CLDND1-227ENST00000513452 XAGE1AQ9HD64 81 aa5.98□□□□□ -1.45
CLDND1-227ENST00000513452 KRTAP9-7A8MTY7 169 aa5.97□□□□□ -1.45
CLDND1-227ENST00000513452 SUMO2P61956 95 aaKnown RBP5.97□□□□□ -1.45
CLDND1-227ENST00000513452 KRTAP13-3Q3SY46 172 aa5.97□□□□□ -1.45
CLDND1-227ENST00000513452 TMEM191AQ9H0A3 160 aa5.97□□□□□ -1.45
CLDND1-227ENST00000513452 RPL37AP8A6NKH3 93 aa5.96□□□□□ -1.46
CLDND1-227ENST00000513452 ZNF727A8MUV8 499 aa5.96□□□□□ -1.46
CLDND1-227ENST00000513452 GATCO43716 136 aaKnown RBP5.96□□□□□ -1.46
CLDND1-227ENST00000513452 SEC61BP60468 96 aaKnown RBP5.96□□□□□ -1.46
CLDND1-227ENST00000513452 HBBP68871 147 aa5.96□□□□□ -1.46
CLDND1-227ENST00000513452 CTAG1AP78358 180 aa5.96□□□□□ -1.46
CLDND1-227ENST00000513452 NRACQ8N912 160 aa5.96□□□□□ -1.46
CLDND1-227ENST00000513452 OCC1Q8TAD7 63 aa5.96□□□□□ -1.46
CLDND1-227ENST00000513452 A0A1B0GUT8 65 aa5.95□□□□□ -1.46
CLDND1-227ENST00000513452 A8MWL6 223 aa5.95□□□□□ -1.46
CLDND1-227ENST00000513452 SMLR1H3BR10 107 aa5.95□□□□□ -1.46
CLDND1-227ENST00000513452 UBE2AP49459 152 aa5.95□□□□□ -1.46
CLDND1-227ENST00000513452 ZNF345Q14585 488 aa5.95□□□□□ -1.46
CLDND1-227ENST00000513452 FP248Q71RG6 208 aaPredicted RBP5.95□□□□□ -1.46
CLDND1-227ENST00000513452 SPANXA1Q9NS26 97 aa5.95□□□□□ -1.46
CLDND1-227ENST00000513452 TP73-AS1Q9UF72 201 aa5.95□□□□□ -1.46
CLDND1-227ENST00000513452 TEX46H3BTG2 121 aa5.94□□□□□ -1.46
CLDND1-227ENST00000513452 PPP1R17O96001 155 aa5.94□□□□□ -1.46
CLDND1-227ENST00000513452 MRPS36P82909 103 aaKnown RBP5.94□□□□□ -1.46
CLDND1-227ENST00000513452 KRTAP13-1Q8IUC0 172 aa5.94□□□□□ -1.46
CLDND1-227ENST00000513452 KRTAP4-12Q9BQ66 201 aa5.94□□□□□ -1.46
CLDND1-227ENST00000513452 GAGE10A6NGK3 116 aa5.93□□□□□ -1.46
CLDND1-227ENST00000513452 PRSS47A8MTI9 375 aa5.93□□□□□ -1.46
CLDND1-227ENST00000513452 CFC1BP0CG36 223 aa5.93□□□□□ -1.46
CLDND1-227ENST00000513452 MT1HP80294 61 aa5.93□□□□□ -1.46
CLDND1-227ENST00000513452 LINC00167Q96N53 147 aa5.93□□□□□ -1.46
CLDND1-227ENST00000513452 KANTRA0A1W2PQU2 76 aa5.92□□□□□ -1.46
CLDND1-227ENST00000513452 HIGD1CA8MV81 97 aa5.92□□□□□ -1.46
CLDND1-227ENST00000513452 PPP1R2P9O14990 202 aa5.92□□□□□ -1.46
CLDND1-227ENST00000513452 PRSS2P07478 247 aa5.92□□□□□ -1.46
CLDND1-227ENST00000513452 CKS1BP61024 79 aa5.92□□□□□ -1.46
CLDND1-227ENST00000513452 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
CLDND1-227ENST00000513452 C3orf22Q8N5N4 141 aa5.92□□□□□ -1.46
CLDND1-227ENST00000513452 TOMM7Q9P0U1 55 aa5.92□□□□□ -1.46
CLDND1-227ENST00000513452 CT83Q5H943 113 aa5.91□□□□□ -1.46
CLDND1-227ENST00000513452 FAM231DQ6ZW35 169 aa5.91□□□□□ -1.46
CLDND1-227ENST00000513452 RPL32P62910 135 aaKnown RBP5.9□□□□□ -1.46
CLDND1-227ENST00000513452 TCAPO15273 167 aa5.89□□□□□ -1.47
CLDND1-227ENST00000513452 PRLHP81277 87 aa5.89□□□□□ -1.47
CLDND1-227ENST00000513452 PNRC1Q12796 327 aaPredicted RBP5.89□□□□□ -1.47
CLDND1-227ENST00000513452 KRTAP19-2Q3LHN2 52 aa5.89□□□□□ -1.47
CLDND1-227ENST00000513452 C6orf226Q5I0X4 101 aa5.89□□□□□ -1.47
CLDND1-227ENST00000513452 SPAG11AQ6PDA7 123 aa5.89□□□□□ -1.47
CLDND1-227ENST00000513452 C20orf78Q9BR46 151 aa5.89□□□□□ -1.47
CLDND1-227ENST00000513452 KRTAP10-6P60371 365 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms