RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 VCANP13611 3396 aa8.13□□□□□ -1.11
CPNE4-209ENST00000512055 TMEM223A0PJW6 202 aa8.13□□□□□ -1.11
CPNE4-209ENST00000512055 LINC00208Q96KT6 92 aa8.13□□□□□ -1.11
CPNE4-209ENST00000512055 PRRC2AP48634 2157 aaKnown RBP8.13□□□□□ -1.11
CPNE4-209ENST00000512055 MYCNOSP40205 109 aa8.13□□□□□ -1.11
CPNE4-209ENST00000512055 TRBV10-1A0A0K0K1A3 114 aa8.13□□□□□ -1.11
CPNE4-209ENST00000512055 TRBV30A0A0K0K1B3 111 aa8.13□□□□□ -1.11
CPNE4-209ENST00000512055 TP53TG3Q9ULZ0 132 aa8.13□□□□□ -1.11
CPNE4-209ENST00000512055 TRBV6-1A0A0K0K1D8 114 aa8.12□□□□□ -1.11
CPNE4-209ENST00000512055 CTRLP40313 264 aa8.12□□□□□ -1.11
CPNE4-209ENST00000512055 CRIP1P50238 77 aa8.12□□□□□ -1.11
CPNE4-209ENST00000512055 SPINK6Q6UWN8 80 aa8.12□□□□□ -1.11
CPNE4-209ENST00000512055 RNASE3P12724 160 aaKnown RBP8.11□□□□□ -1.11
CPNE4-209ENST00000512055 SMAD5-AS1Q9Y6J3 95 aa8.11□□□□□ -1.11
CPNE4-209ENST00000512055 PRYO14603 147 aa8.11□□□□□ -1.11
CPNE4-209ENST00000512055 IGF1P05019 195 aa8.11□□□□□ -1.11
CPNE4-209ENST00000512055 Q6JHZ5 121 aa8.11□□□□□ -1.11
CPNE4-209ENST00000512055 C20orf203Q8NBC4 194 aa8.11□□□□□ -1.11
CPNE4-209ENST00000512055 VPS13AQ96RL7 3174 aa8.1□□□□□ -1.11
CPNE4-209ENST00000512055 IGKV2-24A0A0C4DH68 120 aa8.1□□□□□ -1.11
CPNE4-209ENST00000512055 KLK12Q9UKR0 248 aa8.1□□□□□ -1.11
CPNE4-209ENST00000512055 ZNF462Q96JM2 2506 aa8.1□□□□□ -1.11
CPNE4-209ENST00000512055 TNRC6BQ9UPQ9 1833 aaKnown RBP8.1□□□□□ -1.11
CPNE4-209ENST00000512055 CCL24O00175 119 aa8.1□□□□□ -1.11
CPNE4-209ENST00000512055 Q8N6K4 173 aa8.1□□□□□ -1.11
CPNE4-209ENST00000512055 MAPKAPK5-AS1Q8N8E1 139 aa8.1□□□□□ -1.11
CPNE4-209ENST00000512055 IGLV2-11P01706 119 aa8.1□□□□□ -1.11
CPNE4-209ENST00000512055 C10orf99Q6UWK7 81 aa8.1□□□□□ -1.11
CPNE4-209ENST00000512055 TRBV7-7A0A0K0K1E9 115 aa8.1□□□□□ -1.11
CPNE4-209ENST00000512055 GPHB5Q86YW7 130 aa8.1□□□□□ -1.11
CPNE4-209ENST00000512055 C6orf99Q4VX62 202 aa8.09□□□□□ -1.11
CPNE4-209ENST00000512055 TET2Q6N021 2002 aaPredicted RBP8.09□□□□□ -1.11
CPNE4-209ENST00000512055 RAI1Q7Z5J4 1906 aaPredicted RBP8.09□□□□□ -1.11
CPNE4-209ENST00000512055 LINC00308Q8TCZ7 52 aa8.09□□□□□ -1.11
CPNE4-209ENST00000512055 XAGE1AQ9HD64 81 aa8.09□□□□□ -1.11
CPNE4-209ENST00000512055 PKD1L2Q7Z442 2459 aa8.09□□□□□ -1.11
CPNE4-209ENST00000512055 K7EMT4 169 aa8.08□□□□□ -1.12
CPNE4-209ENST00000512055 C4orf26Q17RF5 130 aa8.08□□□□□ -1.12
CPNE4-209ENST00000512055 SPINT4Q6UDR6 99 aa8.08□□□□□ -1.12
CPNE4-209ENST00000512055 Q6ZQY7 126 aa8.08□□□□□ -1.12
CPNE4-209ENST00000512055 SPAG11AQ6PDA7 123 aa8.08□□□□□ -1.12
CPNE4-209ENST00000512055 Q6ZS46 218 aa8.08□□□□□ -1.12
CPNE4-209ENST00000512055 FAM19A1Q7Z5A9 133 aa8.08□□□□□ -1.12
CPNE4-209ENST00000512055 DCANP1Q8TF63 244 aa8.08□□□□□ -1.12
CPNE4-209ENST00000512055 JMJD1CQ15652 2540 aa8.08□□□□□ -1.12
CPNE4-209ENST00000512055 ZNF73O43830 326 aaPredicted RBP8.08□□□□□ -1.12
CPNE4-209ENST00000512055 CRYGAP11844 174 aa8.08□□□□□ -1.12
CPNE4-209ENST00000512055 Q6ZVQ6 151 aa8.07□□□□□ -1.12
CPNE4-209ENST00000512055 UFSP1Q6NVU6 142 aa8.06□□□□□ -1.12
CPNE4-209ENST00000512055 LST1O00453 97 aa8.06□□□□□ -1.12
CPNE4-209ENST00000512055 PLA2G1BP04054 148 aaKnown RBP8.06□□□□□ -1.12
CPNE4-209ENST00000512055 CCL18P55774 89 aa8.06□□□□□ -1.12
CPNE4-209ENST00000512055 SPINK1P00995 79 aa8.06□□□□□ -1.12
CPNE4-209ENST00000512055 EPG5Q9HCE0 2579 aa8.06□□□□□ -1.12
CPNE4-209ENST00000512055 SPEGQ15772 3267 aa8.06□□□□□ -1.12
CPNE4-209ENST00000512055 X6R8D5 127 aa8.05□□□□□ -1.12
CPNE4-209ENST00000512055 ZNF22P17026 224 aaPredicted RBP8.05□□□□□ -1.12
CPNE4-209ENST00000512055 UBE2D2P62837 147 aa8.05□□□□□ -1.12
CPNE4-209ENST00000512055 PCOTHQ58A44 107 aa8.05□□□□□ -1.12
CPNE4-209ENST00000512055 CDKN2A-AS1Q9UH64 79 aa8.05□□□□□ -1.12
CPNE4-209ENST00000512055 MGAQ8IWI9 3026 aa8.05□□□□□ -1.12
CPNE4-209ENST00000512055 H7C423 109 aa8.05□□□□□ -1.12
CPNE4-209ENST00000512055 CXCL6P80162 114 aa8.05□□□□□ -1.12
CPNE4-209ENST00000512055 ESRGQ1W209 222 aa8.05□□□□□ -1.12
CPNE4-209ENST00000512055 IL17DQ8TAD2 202 aa8.05□□□□□ -1.12
CPNE4-209ENST00000512055 MDFIQ99750 246 aa8.05□□□□□ -1.12
CPNE4-209ENST00000512055 MTORP42345 2549 aa8.05□□□□□ -1.12
CPNE4-209ENST00000512055 MED14OSP0DP75 135 aa8.04□□□□□ -1.12
CPNE4-209ENST00000512055 C16orf74Q96GX8 76 aa8.04□□□□□ -1.12
CPNE4-209ENST00000512055 HHLA3Q9XRX5 114 aa8.04□□□□□ -1.12
CPNE4-209ENST00000512055 A0A0J9YX75 114 aa8.04□□□□□ -1.12
CPNE4-209ENST00000512055 AVPP01185 164 aa8.04□□□□□ -1.12
CPNE4-209ENST00000512055 TRBV6-5A0A0K0K1A5 114 aa8.04□□□□□ -1.12
CPNE4-209ENST00000512055 ZNF843Q8N446 348 aa8.03□□□□□ -1.12
CPNE4-209ENST00000512055 NRACQ8N912 160 aa8.03□□□□□ -1.12
CPNE4-209ENST00000512055 MRGPRG-AS1Q2M3A8 158 aa8.03□□□□□ -1.12
CPNE4-209ENST00000512055 LINC00269Q8N2A0 174 aa8.03□□□□□ -1.12
CPNE4-209ENST00000512055 CELSR3Q9NYQ7 3312 aa8.03□□□□□ -1.12
CPNE4-209ENST00000512055 LINC00310P59036 64 aa8.02□□□□□ -1.13
CPNE4-209ENST00000512055 NEXN-AS1Q8NBZ9 246 aa8.02□□□□□ -1.13
CPNE4-209ENST00000512055 FN1P02751 2386 aaKnown RBP8.02□□□□□ -1.13
CPNE4-209ENST00000512055 SPART-AS1P0CW21 52 aa8.02□□□□□ -1.13
CPNE4-209ENST00000512055 TMEM89A2RUT3 159 aa8.02□□□□□ -1.13
CPNE4-209ENST00000512055 Q6YL49 198 aa8.01□□□□□ -1.13
CPNE4-209ENST00000512055 A0A087WZ39 114 aa8.01□□□□□ -1.13
CPNE4-209ENST00000512055 C2orf91Q6ZV80 131 aa8.01□□□□□ -1.13
CPNE4-209ENST00000512055 Q8N3U1 123 aa8.01□□□□□ -1.13
CPNE4-209ENST00000512055 ZFAND2AQ8N6M9 145 aa8.01□□□□□ -1.13
CPNE4-209ENST00000512055 C11orf21Q9P2W6 132 aa8.01□□□□□ -1.13
CPNE4-209ENST00000512055 REV3LO60673 3130 aa8.01□□□□□ -1.13
CPNE4-209ENST00000512055 PYGO1Q9Y3Y4 419 aa8□□□□□ -1.13
CPNE4-209ENST00000512055 F8W735 103 aaPredicted RBP8□□□□□ -1.13
CPNE4-209ENST00000512055 PTPRBP23467 1997 aa8□□□□□ -1.13
CPNE4-209ENST00000512055 KIR2DL5BQ8NHK3 375 aa8□□□□□ -1.13
CPNE4-209ENST00000512055 PRR9Q5T870 116 aa8□□□□□ -1.13
CPNE4-209ENST00000512055 C4orf3Q8WVX3 66 aa8□□□□□ -1.13
CPNE4-209ENST00000512055 GAS8-AS1O95177 125 aa7.99□□□□□ -1.13
CPNE4-209ENST00000512055 TMEM254Q8TBM7 123 aa7.99□□□□□ -1.13
CPNE4-209ENST00000512055 IBA57-AS1B1ANH7 110 aa7.99□□□□□ -1.13
CPNE4-209ENST00000512055 K7EQG2 157 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms