RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 MPV17L2Q567V2 206 aa6.23□□□□□ -1.41
NR1I3-228ENST00000511676 GEMIN7Q9H840 131 aaKnown RBP6.23□□□□□ -1.41
NR1I3-228ENST00000511676 PRR34Q9NV39 138 aa6.23□□□□□ -1.41
NR1I3-228ENST00000511676 MRPS16Q9Y3D3 137 aaKnown RBP6.23□□□□□ -1.41
NR1I3-228ENST00000511676 IGLV4-60A0A075B6I1 120 aa6.22□□□□□ -1.41
NR1I3-228ENST00000511676 TMEM223A0PJW6 202 aa6.22□□□□□ -1.41
NR1I3-228ENST00000511676 TMEM262E9PQX1 116 aa6.22□□□□□ -1.41
NR1I3-228ENST00000511676 MAJINQ3KP22 176 aa6.22□□□□□ -1.41
NR1I3-228ENST00000511676 ANKRD39Q53RE8 183 aa6.22□□□□□ -1.41
NR1I3-228ENST00000511676 LINC01556Q5JQF7 62 aa6.22□□□□□ -1.41
NR1I3-228ENST00000511676 TMEM170BQ5T4T1 132 aa6.22□□□□□ -1.41
NR1I3-228ENST00000511676 LINC00242Q5T6M2 205 aa6.22□□□□□ -1.41
NR1I3-228ENST00000511676 BOD1L2Q8IYS8 172 aa6.22□□□□□ -1.41
NR1I3-228ENST00000511676 STPG4Q8N801 248 aa6.22□□□□□ -1.41
NR1I3-228ENST00000511676 PLEKHB2Q96CS7 222 aa6.22□□□□□ -1.41
NR1I3-228ENST00000511676 UPK3BQ9BT76 320 aa6.22□□□□□ -1.41
NR1I3-228ENST00000511676 BIRC6Q9NR09 4857 aa6.22□□□□□ -1.41
NR1I3-228ENST00000511676 STARD9Q9P2P6 4700 aa6.21□□□□□ -1.42
NR1I3-228ENST00000511676 NMUP48645 174 aa6.21□□□□□ -1.42
NR1I3-228ENST00000511676 CCL18P55774 89 aa6.21□□□□□ -1.42
NR1I3-228ENST00000511676 SS18Q15532 418 aa6.21□□□□□ -1.42
NR1I3-228ENST00000511676 TRAV8-4A0A0B4J246 113 aa6.2□□□□□ -1.42
NR1I3-228ENST00000511676 IGLV5-39A0A0G2JS06 123 aa6.2□□□□□ -1.42
NR1I3-228ENST00000511676 LINC00959A0A1B0GUT2 108 aa6.2□□□□□ -1.42
NR1I3-228ENST00000511676 LEPROTO15243 131 aa6.2□□□□□ -1.42
NR1I3-228ENST00000511676 DNAH10OSP0CZ25 163 aa6.2□□□□□ -1.42
NR1I3-228ENST00000511676 ESRGQ1W209 222 aa6.2□□□□□ -1.42
NR1I3-228ENST00000511676 SFTA2Q6UW10 78 aa6.2□□□□□ -1.42
NR1I3-228ENST00000511676 UBE2DNLQ8IWF7 75 aa6.2□□□□□ -1.42
NR1I3-228ENST00000511676 LINC00469Q8N7U9 141 aa6.2□□□□□ -1.42
NR1I3-228ENST00000511676 PRO1933Q9H354 126 aa6.2□□□□□ -1.42
NR1I3-228ENST00000511676 HIGD1BQ9P298 99 aa6.2□□□□□ -1.42
NR1I3-228ENST00000511676 APLNQ9ULZ1 77 aa6.2□□□□□ -1.42
NR1I3-228ENST00000511676 A0A087WZ39 114 aa6.19□□□□□ -1.42
NR1I3-228ENST00000511676 TRAV13-1A0A0B4J241 112 aa6.19□□□□□ -1.42
NR1I3-228ENST00000511676 IGHV3OR16-9A0A0B4J2B5 98 aa6.19□□□□□ -1.42
NR1I3-228ENST00000511676 IGHV1-58A0A0C4DH39 117 aa6.19□□□□□ -1.42
NR1I3-228ENST00000511676 ANGP03950 147 aaKnown RBP6.19□□□□□ -1.42
NR1I3-228ENST00000511676 REG3AQ06141 175 aa6.19□□□□□ -1.42
NR1I3-228ENST00000511676 MIAQ16674 131 aa6.19□□□□□ -1.42
NR1I3-228ENST00000511676 RNASE13Q5GAN3 156 aaKnown RBP6.19□□□□□ -1.42
NR1I3-228ENST00000511676 C10orf126Q8N4M7 172 aa6.19□□□□□ -1.42
NR1I3-228ENST00000511676 IGKV2D-26A0A0A0MRZ7 120 aa6.18□□□□□ -1.42
NR1I3-228ENST00000511676 J3QQQ9 107 aa6.18□□□□□ -1.42
NR1I3-228ENST00000511676 HNRNPA3P51991 378 aaKnown RBP6.18□□□□□ -1.42
NR1I3-228ENST00000511676 CD164L2Q6UWJ8 174 aa6.18□□□□□ -1.42
NR1I3-228ENST00000511676 C14orf144Q96I85 54 aa6.18□□□□□ -1.42
NR1I3-228ENST00000511676 CDKN2A-AS1Q9UH64 79 aa6.18□□□□□ -1.42
NR1I3-228ENST00000511676 EPPK1P58107 5090 aaKnown RBP6.17□□□□□ -1.42
NR1I3-228ENST00000511676 MYMXA0A1B0GTQ4 84 aa6.17□□□□□ -1.42
NR1I3-228ENST00000511676 SMIM1B2RUZ4 78 aa6.17□□□□□ -1.42
NR1I3-228ENST00000511676 CRPP02741 224 aa6.17□□□□□ -1.42
NR1I3-228ENST00000511676 IGHV3-30-3P0DP02 117 aa6.17□□□□□ -1.42
NR1I3-228ENST00000511676 LGALS3P17931 250 aaKnown RBP6.17□□□□□ -1.42
NR1I3-228ENST00000511676 WFDC10BQ8IUB3 73 aa6.17□□□□□ -1.42
NR1I3-228ENST00000511676 LINC00269Q8N2A0 174 aa6.17□□□□□ -1.42
NR1I3-228ENST00000511676 PCP4L1A6NKN8 68 aa6.16□□□□□ -1.42
NR1I3-228ENST00000511676 TAL2Q16559 108 aa6.16□□□□□ -1.42
NR1I3-228ENST00000511676 LBHQ53QV2 105 aaPredicted RBP6.16□□□□□ -1.42
NR1I3-228ENST00000511676 LINC00588Q9Y4M8 146 aa6.16□□□□□ -1.42
NR1I3-228ENST00000511676 TRAV8-3A0A0A6YYJ7 113 aa6.15□□□□□ -1.42
NR1I3-228ENST00000511676 ZNF815PA8K554 130 aa6.15□□□□□ -1.42
NR1I3-228ENST00000511676 M0R143 59 aa6.15□□□□□ -1.42
NR1I3-228ENST00000511676 HERV-K104P63124 156 aa6.15□□□□□ -1.42
NR1I3-228ENST00000511676 COX6A2Q02221 97 aa6.15□□□□□ -1.42
NR1I3-228ENST00000511676 C1orf134Q5TEV5 83 aa6.15□□□□□ -1.42
NR1I3-228ENST00000511676 C2orf91Q6ZV80 131 aa6.15□□□□□ -1.42
NR1I3-228ENST00000511676 PCP2Q8IVA1 136 aa6.15□□□□□ -1.42
NR1I3-228ENST00000511676 CHCHD10Q8WYQ3 142 aaPredicted RBP6.15□□□□□ -1.42
NR1I3-228ENST00000511676 KLK12Q9UKR0 248 aa6.15□□□□□ -1.42
NR1I3-228ENST00000511676 ALMS1Q8TCU4 4167 aa6.14□□□□□ -1.43
NR1I3-228ENST00000511676 LINC00587B1AMM8 73 aa6.14□□□□□ -1.43
NR1I3-228ENST00000511676 COX7A2LO14548 114 aa6.14□□□□□ -1.43
NR1I3-228ENST00000511676 NDUFA1O15239 70 aa6.14□□□□□ -1.43
NR1I3-228ENST00000511676 TIMM17BO60830 172 aa6.14□□□□□ -1.43
NR1I3-228ENST00000511676 GCSHP23434 173 aa6.14□□□□□ -1.43
NR1I3-228ENST00000511676 CXCL5P42830 114 aa6.14□□□□□ -1.43
NR1I3-228ENST00000511676 HSD52Q0P140 79 aa6.14□□□□□ -1.43
NR1I3-228ENST00000511676 ENHOQ6UWT2 76 aa6.14□□□□□ -1.43
NR1I3-228ENST00000511676 Q6ZVH6 145 aa6.14□□□□□ -1.43
NR1I3-228ENST00000511676 Q8IZM0 81 aa6.14□□□□□ -1.43
NR1I3-228ENST00000511676 RMI2Q96E14 147 aa6.14□□□□□ -1.43
NR1I3-228ENST00000511676 PPDPFQ9H3Y8 114 aa6.14□□□□□ -1.43
NR1I3-228ENST00000511676 SPANXB1Q9NS25 103 aaPredicted RBP6.14□□□□□ -1.43
NR1I3-228ENST00000511676 IBA57-AS1B1ANH7 110 aa6.13□□□□□ -1.43
NR1I3-228ENST00000511676 F8WDY8 70 aa6.13□□□□□ -1.43
NR1I3-228ENST00000511676 APOMO95445 188 aa6.13□□□□□ -1.43
NR1I3-228ENST00000511676 SPINK8P0C7L1 97 aa6.13□□□□□ -1.43
NR1I3-228ENST00000511676 TSPEAR-AS2P59090 65 aa6.13□□□□□ -1.43
NR1I3-228ENST00000511676 FOXI1Q12951 378 aa6.13□□□□□ -1.43
NR1I3-228ENST00000511676 NDUFA12Q9UI09 145 aa6.13□□□□□ -1.43
NR1I3-228ENST00000511676 COX11Q9Y6N1 276 aa6.13□□□□□ -1.43
NR1I3-228ENST00000511676 A0A0J9YXY3 114 aa6.12□□□□□ -1.43
NR1I3-228ENST00000511676 TMEM238C9JI98 176 aa6.12□□□□□ -1.43
NR1I3-228ENST00000511676 IGHV3-30P01768 117 aa6.12□□□□□ -1.43
NR1I3-228ENST00000511676 IGHV3-33P01772 117 aa6.12□□□□□ -1.43
NR1I3-228ENST00000511676 IGHV3-30-5P0DP03 117 aa6.12□□□□□ -1.43
NR1I3-228ENST00000511676 XCL1P47992 114 aa6.12□□□□□ -1.43
NR1I3-228ENST00000511676 TTC32Q5I0X7 151 aa6.12□□□□□ -1.43
NR1I3-228ENST00000511676 SCGB1D4Q6XE38 83 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms