RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 LINC01556Q5JQF7 62 aa10.38□□□□□ -0.75
SCLT1-209ENST00000511426 ZFAND6Q6FIF0 208 aa10.38□□□□□ -0.75
SCLT1-209ENST00000511426 MAPKAPK5-AS1Q8N8E1 139 aa10.38□□□□□ -0.75
SCLT1-209ENST00000511426 TRAV8-4A0A0B4J246 113 aa10.38□□□□□ -0.75
SCLT1-209ENST00000511426 SPINK8P0C7L1 97 aa10.38□□□□□ -0.75
SCLT1-209ENST00000511426 SFTA2Q6UW10 78 aa10.38□□□□□ -0.75
SCLT1-209ENST00000511426 TTTY13Q9BZ97 58 aa10.38□□□□□ -0.75
SCLT1-209ENST00000511426 TSPEAR-AS2P59090 65 aa10.37□□□□□ -0.75
SCLT1-209ENST00000511426 CD164L2Q6UWJ8 174 aa10.37□□□□□ -0.75
SCLT1-209ENST00000511426 SCGB1D4Q6XE38 83 aa10.37□□□□□ -0.75
SCLT1-209ENST00000511426 UPK3BQ9BT76 320 aa10.37□□□□□ -0.75
SCLT1-209ENST00000511426 HUWE1Q7Z6Z7 4374 aaKnown RBP10.36□□□□□ -0.75
SCLT1-209ENST00000511426 TRAV8-3A0A0A6YYJ7 113 aa10.36□□□□□ -0.75
SCLT1-209ENST00000511426 NUPR2A6NF83 97 aa10.36□□□□□ -0.75
SCLT1-209ENST00000511426 CRPP02741 224 aa10.36□□□□□ -0.75
SCLT1-209ENST00000511426 DNAH10OSP0CZ25 163 aa10.36□□□□□ -0.75
SCLT1-209ENST00000511426 SNHG12Q9BXW3 62 aa10.36□□□□□ -0.75
SCLT1-209ENST00000511426 TP73-AS1Q9UF72 201 aa10.36□□□□□ -0.75
SCLT1-209ENST00000511426 TENM3Q9P273 2699 aa10.35□□□□□ -0.75
SCLT1-209ENST00000511426 IGKV3OR2-268A0A0C4DH90 116 aa10.35□□□□□ -0.75
SCLT1-209ENST00000511426 IGLL5B9A064 214 aa10.35□□□□□ -0.75
SCLT1-209ENST00000511426 MIAQ16674 131 aa10.35□□□□□ -0.75
SCLT1-209ENST00000511426 WFDC10BQ8IUB3 73 aa10.35□□□□□ -0.75
SCLT1-209ENST00000511426 K7EP13 123 aa10.34□□□□□ -0.75
SCLT1-209ENST00000511426 SPANXB1Q9NS25 103 aaPredicted RBP10.34□□□□□ -0.75
SCLT1-209ENST00000511426 NDUFA12Q9UI09 145 aa10.34□□□□□ -0.75
SCLT1-209ENST00000511426 IGHV3-64A0A075B6Q5 118 aa10.34□□□□□ -0.75
SCLT1-209ENST00000511426 NDUFA1O15239 70 aa10.34□□□□□ -0.75
SCLT1-209ENST00000511426 HERV-K104P63124 156 aa10.34□□□□□ -0.75
SCLT1-209ENST00000511426 KLK12Q9UKR0 248 aa10.34□□□□□ -0.75
SCLT1-209ENST00000511426 KLK5Q9Y337 293 aaPredicted RBP10.34□□□□□ -0.75
SCLT1-209ENST00000511426 BVES-AS1Q5T3Y7 98 aa10.33□□□□□ -0.76
SCLT1-209ENST00000511426 CHCHD10Q8WYQ3 142 aaPredicted RBP10.33□□□□□ -0.76
SCLT1-209ENST00000511426 TMEM238C9JI98 176 aa10.32□□□□□ -0.76
SCLT1-209ENST00000511426 TIMM17BO60830 172 aa10.32□□□□□ -0.76
SCLT1-209ENST00000511426 XCL1P47992 114 aa10.32□□□□□ -0.76
SCLT1-209ENST00000511426 COX7A2LO14548 114 aa10.31□□□□□ -0.76
SCLT1-209ENST00000511426 HINT1P49773 126 aaPredicted RBP10.31□□□□□ -0.76
SCLT1-209ENST00000511426 CLPSL2Q6UWE3 100 aa10.31□□□□□ -0.76
SCLT1-209ENST00000511426 Q6ZVH6 145 aa10.31□□□□□ -0.76
SCLT1-209ENST00000511426 TM2D2Q9BX73 214 aa10.31□□□□□ -0.76
SCLT1-209ENST00000511426 LINC00588Q9Y4M8 146 aa10.31□□□□□ -0.76
SCLT1-209ENST00000511426 EREGO14944 169 aa10.31□□□□□ -0.76
SCLT1-209ENST00000511426 IGHV3-30P01768 117 aa10.31□□□□□ -0.76
SCLT1-209ENST00000511426 IGHV3-33P01772 117 aa10.31□□□□□ -0.76
SCLT1-209ENST00000511426 IGHV3-30-5P0DP03 117 aa10.31□□□□□ -0.76
SCLT1-209ENST00000511426 COL5A1-AS1Q5SY13 56 aa10.31□□□□□ -0.76
SCLT1-209ENST00000511426 ENHOQ6UWT2 76 aa10.31□□□□□ -0.76
SCLT1-209ENST00000511426 Q8N3U1 123 aa10.31□□□□□ -0.76
SCLT1-209ENST00000511426 C10orf126Q8N4M7 172 aa10.31□□□□□ -0.76
SCLT1-209ENST00000511426 DNHD1Q96M86 4753 aa10.3□□□□□ -0.76
SCLT1-209ENST00000511426 A0A0J9YXY3 114 aa10.3□□□□□ -0.76
SCLT1-209ENST00000511426 APOMO95445 188 aa10.3□□□□□ -0.76
SCLT1-209ENST00000511426 COX7B2Q8TF08 81 aa10.3□□□□□ -0.76
SCLT1-209ENST00000511426 ORAOV1Q8WV07 137 aa10.3□□□□□ -0.76
SCLT1-209ENST00000511426 HIST1H4GQ99525 98 aa10.3□□□□□ -0.76
SCLT1-209ENST00000511426 CXCL5P42830 114 aa10.29□□□□□ -0.76
SCLT1-209ENST00000511426 Q8IZM0 81 aa10.29□□□□□ -0.76
SCLT1-209ENST00000511426 CEND1Q8N111 149 aa10.29□□□□□ -0.76
SCLT1-209ENST00000511426 UBE2WQ96B02 151 aa10.29□□□□□ -0.76
SCLT1-209ENST00000511426 ZNF625Q96I27 306 aaPredicted RBP10.29□□□□□ -0.76
SCLT1-209ENST00000511426 DNAH9Q9NYC9 4486 aa10.29□□□□□ -0.76
SCLT1-209ENST00000511426 A6NDN8 102 aa10.28□□□□□ -0.76
SCLT1-209ENST00000511426 FOXI1Q12951 378 aa10.28□□□□□ -0.76
SCLT1-209ENST00000511426 CIRBPQ14011 172 aaKnown RBP10.28□□□□□ -0.76
SCLT1-209ENST00000511426 C5orf38Q86SI9 138 aa10.28□□□□□ -0.76
SCLT1-209ENST00000511426 APLNQ9ULZ1 77 aa10.28□□□□□ -0.76
SCLT1-209ENST00000511426 TMEM238LA0A1B0GVL6 79 aa10.28□□□□□ -0.76
SCLT1-209ENST00000511426 A6NJY4 79 aa10.28□□□□□ -0.76
SCLT1-209ENST00000511426 SRSF9Q13242 221 aaKnown RBP eCLIP10.28□□□□□ -0.76
SCLT1-209ENST00000511426 BATFQ16520 125 aa10.28□□□□□ -0.76
SCLT1-209ENST00000511426 Q9H8V8 135 aa10.28□□□□□ -0.76
SCLT1-209ENST00000511426 MALP21145 153 aa10.27□□□□□ -0.77
SCLT1-209ENST00000511426 GCSHP23434 173 aa10.27□□□□□ -0.77
SCLT1-209ENST00000511426 SPANXDQ9BXN6 97 aa10.27□□□□□ -0.77
SCLT1-209ENST00000511426 SPANXCQ9NY87 97 aa10.27□□□□□ -0.77
SCLT1-209ENST00000511426 PRSS2P07478 247 aa10.26□□□□□ -0.77
SCLT1-209ENST00000511426 COPS9Q8WXC6 57 aa10.26□□□□□ -0.77
SCLT1-209ENST00000511426 PPDPFQ9H3Y8 114 aa10.26□□□□□ -0.77
SCLT1-209ENST00000511426 IGLV10-54A0A075B6I4 117 aa10.25□□□□□ -0.77
SCLT1-209ENST00000511426 GAGE12HA6NDE8 117 aa10.25□□□□□ -0.77
SCLT1-209ENST00000511426 IBA57-AS1B1ANH7 110 aa10.25□□□□□ -0.77
SCLT1-209ENST00000511426 RMI2Q96E14 147 aa10.25□□□□□ -0.77
SCLT1-209ENST00000511426 C1orf43Q9BWL3 253 aa10.25□□□□□ -0.77
SCLT1-209ENST00000511426 IFITM1P13164 125 aa10.24□□□□□ -0.77
SCLT1-209ENST00000511426 C6orf226Q5I0X4 101 aa10.24□□□□□ -0.77
SCLT1-209ENST00000511426 LITAFQ99732 161 aa10.24□□□□□ -0.77
SCLT1-209ENST00000511426 TOMM7Q9P0U1 55 aa10.24□□□□□ -0.77
SCLT1-209ENST00000511426 PTTG1IPP53801 180 aa10.23□□□□□ -0.77
SCLT1-209ENST00000511426 CFAP161Q6P656 301 aa10.22□□□□□ -0.77
SCLT1-209ENST00000511426 FXYD2P54710 66 aa10.22□□□□□ -0.77
SCLT1-209ENST00000511426 RPL24P83731 157 aaKnown RBP10.22□□□□□ -0.77
SCLT1-209ENST00000511426 KRTAP26-1Q6PEX3 210 aa10.22□□□□□ -0.77
SCLT1-209ENST00000511426 COX11Q9Y6N1 276 aa10.22□□□□□ -0.77
SCLT1-209ENST00000511426 F8WDY8 70 aa10.21□□□□□ -0.78
SCLT1-209ENST00000511426 CKS1BP61024 79 aa10.21□□□□□ -0.78
SCLT1-209ENST00000511426 UBE2DNLQ8IWF7 75 aa10.21□□□□□ -0.78
SCLT1-209ENST00000511426 MUC7Q8TAX7 377 aa10.21□□□□□ -0.78
SCLT1-209ENST00000511426 A0A1B0GWB2 263 aa10.2□□□□□ -0.78
SCLT1-209ENST00000511426 KIAA0087Q14695 138 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms