RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 J3QQQ9 107 aa3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 CCL25O15444 150 aa3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 ZNF22P17026 224 aaPredicted RBP3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 LGALS3P17931 250 aaKnown RBP3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 RPL35AP18077 110 aaKnown RBP3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 FXYD2P54710 66 aa3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 AMMECR1LQ6DCA0 310 aa3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 SBSPONQ8IVN8 264 aa3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 LINC00612Q8N6U2 182 aa3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 SLC25A29Q8N8R3 303 aa3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 WFDC9Q8NEX5 89 aa3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 OR5A1Q8NGJ0 315 aa3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 PHLDA1Q8WV24 401 aaPredicted RBP3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 OPRPNQ99935 248 aaPredicted RBP3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 WFDC10AQ9H1F0 79 aa3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 NOP10Q9NPE3 64 aaKnown RBP3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 UNC79Q9P2D8 2635 aa3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 Q9UF83 564 aa3.06□□□□□ -1.92
UBE2D3-230ENST00000510599 TLN2Q9Y4G6 2542 aa3.05□□□□□ -1.92
UBE2D3-230ENST00000510599 SETXQ7Z333 2677 aaKnown RBP3.05□□□□□ -1.92
UBE2D3-230ENST00000510599 TRGV2A0A075B6R0 118 aa3.05□□□□□ -1.92
UBE2D3-230ENST00000510599 A0A1W2PPM0 123 aa3.05□□□□□ -1.92
UBE2D3-230ENST00000510599 KRTAP16-1A8MUX0 517 aa3.05□□□□□ -1.92
UBE2D3-230ENST00000510599 K7EP13 123 aa3.05□□□□□ -1.92
UBE2D3-230ENST00000510599 UBE2D1P51668 147 aa3.05□□□□□ -1.92
UBE2D3-230ENST00000510599 EMP1P54849 157 aa3.05□□□□□ -1.92
UBE2D3-230ENST00000510599 APOC4P55056 127 aa3.05□□□□□ -1.92
UBE2D3-230ENST00000510599 C12orf74Q32Q52 190 aa3.05□□□□□ -1.92
UBE2D3-230ENST00000510599 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
UBE2D3-230ENST00000510599 SCGB1D4Q6XE38 83 aa3.05□□□□□ -1.92
UBE2D3-230ENST00000510599 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.05□□□□□ -1.92
UBE2D3-230ENST00000510599 DEFB104AQ8WTQ1 72 aa3.05□□□□□ -1.92
UBE2D3-230ENST00000510599 SONP18583 2426 aaKnown RBP3.05□□□□□ -1.92
UBE2D3-230ENST00000510599 HIVEP2P31629 2446 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 OTOGQ6ZRI0 2925 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 TRGV4A0A0C4DH28 118 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 IGHV3-38A0A0C4DH36 116 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 IGKV2-29A2NJV5 120 aaPredicted RBP3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 GAGE10A6NGK3 116 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 LYRM9A8MSI8 78 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 IGLL5B9A064 214 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 TMEM238C9JI98 176 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 H3BUT2 72 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 K7EP34 96 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 TIMM17BO60830 172 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 IGHV3-30P01768 117 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 LINC00694P0DN24 101 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 IGHV3-30-3P0DP02 117 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 IGHV3-30-5P0DP03 117 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 FABP2P12104 132 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 TSPEAR-AS2P59090 65 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 HERVK_113P63121 156 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 SRSF9Q13242 221 aaKnown RBP eCLIP3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 CEMP1Q6PRD7 247 aaPredicted RBP3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 NTM-AS1Q6ZSK4 140 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 Q6ZUT4 128 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 NOTCH2NLQ7Z3S9 236 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 RAB37Q96AX2 223 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 TMEM101Q96IK0 257 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 VSIG2Q96IQ7 327 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 TMEM243Q9BU79 118 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 GEMIN7Q9H840 131 aaKnown RBP3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 CDC42SE2Q9NRR3 84 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 NHP2Q9NX24 153 aaKnown RBP3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 ACANP16112 2415 aa3.04□□□□□ -1.92
UBE2D3-230ENST00000510599 A0A0J9YWU9 116 aa3.03□□□□□ -1.92
UBE2D3-230ENST00000510599 A0A0J9YXY3 114 aa3.03□□□□□ -1.92
UBE2D3-230ENST00000510599 SMIM1B2RUZ4 78 aa3.03□□□□□ -1.92
UBE2D3-230ENST00000510599 UBE2L6O14933 153 aa3.03□□□□□ -1.92
UBE2D3-230ENST00000510599 MIFP14174 115 aa3.03□□□□□ -1.92
UBE2D3-230ENST00000510599 GAGE5Q13069 117 aa3.03□□□□□ -1.92
UBE2D3-230ENST00000510599 GAGE6Q13070 117 aa3.03□□□□□ -1.92
UBE2D3-230ENST00000510599 LINC00242Q5T6M2 205 aa3.03□□□□□ -1.92
UBE2D3-230ENST00000510599 ZFAND6Q6FIF0 208 aa3.03□□□□□ -1.92
UBE2D3-230ENST00000510599 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
UBE2D3-230ENST00000510599 SPANXDQ9BXN6 97 aa3.03□□□□□ -1.92
UBE2D3-230ENST00000510599 PPDPFQ9H3Y8 114 aa3.03□□□□□ -1.92
UBE2D3-230ENST00000510599 SPANXCQ9NY87 97 aa3.03□□□□□ -1.92
UBE2D3-230ENST00000510599 SPCS1Q9Y6A9 102 aa3.03□□□□□ -1.92
UBE2D3-230ENST00000510599 CCDC168Q8NDH2 2452 aa3.03□□□□□ -1.92
UBE2D3-230ENST00000510599 NSD1Q96L73 2696 aaPredicted RBP3.02□□□□□ -1.93
UBE2D3-230ENST00000510599 TRBV6-8A0A0A6YYG3 113 aa3.02□□□□□ -1.93
UBE2D3-230ENST00000510599 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.02□□□□□ -1.93
UBE2D3-230ENST00000510599 A0A0B4J2C4 111 aa3.02□□□□□ -1.93
UBE2D3-230ENST00000510599 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
UBE2D3-230ENST00000510599 A8MZ25 164 aa3.02□□□□□ -1.93
UBE2D3-230ENST00000510599 K7ERJ3 54 aa3.02□□□□□ -1.93
UBE2D3-230ENST00000510599 NDUFA1O15239 70 aa3.02□□□□□ -1.93
UBE2D3-230ENST00000510599 RPL24P83731 157 aaKnown RBP3.02□□□□□ -1.93
UBE2D3-230ENST00000510599 LYRM7Q5U5X0 104 aa3.02□□□□□ -1.93
UBE2D3-230ENST00000510599 CDKN2A-AS1Q9UH64 79 aa3.02□□□□□ -1.93
UBE2D3-230ENST00000510599 PRO1854Q9UHT4 67 aa3.02□□□□□ -1.93
UBE2D3-230ENST00000510599 PRO0255Q9UI72 69 aa3.02□□□□□ -1.93
UBE2D3-230ENST00000510599 FASNP49327 2511 aaKnown RBP3.02□□□□□ -1.93
UBE2D3-230ENST00000510599 TRAV26-1A0A087WT03 109 aa3.01□□□□□ -1.93
UBE2D3-230ENST00000510599 TRAV8-3A0A0A6YYJ7 113 aa3.01□□□□□ -1.93
UBE2D3-230ENST00000510599 LOC100131303A0A0U1RQF7 123 aa3.01□□□□□ -1.93
UBE2D3-230ENST00000510599 TEX48A0A1B0GUV7 120 aa3.01□□□□□ -1.93
UBE2D3-230ENST00000510599 F8W1H4 67 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms