RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 SVILO95425 2214 aa3.39□□□□□ -1.87
LINC01088-205ENST00000509088 M0QY20 66 aa3.39□□□□□ -1.87
LINC01088-205ENST00000509088 APOC4P55056 127 aa3.39□□□□□ -1.87
LINC01088-205ENST00000509088 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.39□□□□□ -1.87
LINC01088-205ENST00000509088 LCA10Q71F78 164 aa3.39□□□□□ -1.87
LINC01088-205ENST00000509088 C6orf223Q8N319 242 aa3.39□□□□□ -1.87
LINC01088-205ENST00000509088 Q8N6K4 173 aa3.39□□□□□ -1.87
LINC01088-205ENST00000509088 NPBQ8NG41 125 aa3.39□□□□□ -1.87
LINC01088-205ENST00000509088 TYMSOSQ8TAI1 123 aa3.39□□□□□ -1.87
LINC01088-205ENST00000509088 RMI2Q96E14 147 aa3.39□□□□□ -1.87
LINC01088-205ENST00000509088 ZNF625Q96I27 306 aaPredicted RBP3.39□□□□□ -1.87
LINC01088-205ENST00000509088 UBE2E2Q96LR5 201 aa3.39□□□□□ -1.87
LINC01088-205ENST00000509088 KAAG1Q9UBP8 84 aa3.39□□□□□ -1.87
LINC01088-205ENST00000509088 COL27A1Q8IZC6 1860 aaPredicted RBP3.39□□□□□ -1.87
LINC01088-205ENST00000509088 ABCA1O95477 2261 aa3.39□□□□□ -1.87
LINC01088-205ENST00000509088 ATRXP46100 2492 aa3.38□□□□□ -1.87
LINC01088-205ENST00000509088 IGLV3-9A0A075B6K5 115 aa3.38□□□□□ -1.87
LINC01088-205ENST00000509088 IGHV3OR16-12A0A075B7B8 117 aa3.38□□□□□ -1.87
LINC01088-205ENST00000509088 A0A1B0GW54 56 aa3.38□□□□□ -1.87
LINC01088-205ENST00000509088 KRTAP10-1P60331 282 aa3.38□□□□□ -1.87
LINC01088-205ENST00000509088 NREPQ16612 68 aa3.38□□□□□ -1.87
LINC01088-205ENST00000509088 DEFB114Q30KQ6 69 aa3.38□□□□□ -1.87
LINC01088-205ENST00000509088 ASB16-AS1Q495Z4 193 aa3.38□□□□□ -1.87
LINC01088-205ENST00000509088 HIGD2BQ4VC39 106 aa3.38□□□□□ -1.87
LINC01088-205ENST00000509088 MIR7-3HGQ8N6C7 128 aa3.38□□□□□ -1.87
LINC01088-205ENST00000509088 ZFAND2AQ8N6M9 145 aa3.38□□□□□ -1.87
LINC01088-205ENST00000509088 F5P12259 2224 aa3.38□□□□□ -1.87
LINC01088-205ENST00000509088 KNL1Q8NG31 2342 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 SDK2Q58EX2 2172 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 IGHV3-21A0A0B4J1V1 117 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 LOC100131303A0A0U1RQF7 123 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 LY6G6DO95868 133 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 IGLV1-47P01700 117 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 IGHV1-8P0DP01 117 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 RNASE3P12724 160 aaKnown RBP3.37□□□□□ -1.87
LINC01088-205ENST00000509088 CCL4P13236 92 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 IGHV1-2P23083 117 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 ELOF1P60002 83 aaKnown RBP3.37□□□□□ -1.87
LINC01088-205ENST00000509088 DEFB133Q30KQ1 61 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 Q6ZS52 159 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 C7orf65Q6ZTY9 151 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 ITLN2Q8WWU7 325 aaPredicted RBP3.37□□□□□ -1.87
LINC01088-205ENST00000509088 DIRC1Q969H9 104 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 BPESC1Q9GZL8 116 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 SNURFQ9Y675 71 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 ARHGAP32A7KAX9 2087 aa3.37□□□□□ -1.87
LINC01088-205ENST00000509088 IGHV3-64A0A075B6Q5 118 aa3.36□□□□□ -1.87
LINC01088-205ENST00000509088 TRBV6-8A0A0A6YYG3 113 aa3.36□□□□□ -1.87
LINC01088-205ENST00000509088 IGHV3-64DA0A0J9YX35 117 aa3.36□□□□□ -1.87
LINC01088-205ENST00000509088 BPY2O14599 106 aa3.36□□□□□ -1.87
LINC01088-205ENST00000509088 NCR3O14931 201 aa3.36□□□□□ -1.87
LINC01088-205ENST00000509088 LECT2O14960 151 aa3.36□□□□□ -1.87
LINC01088-205ENST00000509088 ZNF73O43830 326 aaPredicted RBP3.36□□□□□ -1.87
LINC01088-205ENST00000509088 LY6HO94772 140 aa3.36□□□□□ -1.87
LINC01088-205ENST00000509088 DEFB103AP81534 67 aa3.36□□□□□ -1.87
LINC01088-205ENST00000509088 MUC7Q8TAX7 377 aa3.36□□□□□ -1.87
LINC01088-205ENST00000509088 SMIM11BQ8TCY0 68 aa3.36□□□□□ -1.87
LINC01088-205ENST00000509088 SND1-IT1Q9HBX3 110 aa3.36□□□□□ -1.87
LINC01088-205ENST00000509088 PCNTO95613 3336 aa3.36□□□□□ -1.87
LINC01088-205ENST00000509088 TRAV22A0A0B4J277 110 aa3.35□□□□□ -1.87
LINC01088-205ENST00000509088 LCE6AA0A183 80 aa3.35□□□□□ -1.87
LINC01088-205ENST00000509088 KLLNB2CW77 178 aa3.35□□□□□ -1.87
LINC01088-205ENST00000509088 TFF1P04155 84 aa3.35□□□□□ -1.87
LINC01088-205ENST00000509088 SOSTDC1Q6X4U4 206 aa3.35□□□□□ -1.87
LINC01088-205ENST00000509088 Q6ZQT0 140 aa3.35□□□□□ -1.87
LINC01088-205ENST00000509088 Q8N814 137 aa3.35□□□□□ -1.87
LINC01088-205ENST00000509088 CCL17Q92583 94 aa3.35□□□□□ -1.87
LINC01088-205ENST00000509088 TTTY12Q9BZ98 90 aa3.35□□□□□ -1.87
LINC01088-205ENST00000509088 IGKV2-29A2NJV5 120 aaPredicted RBP3.34□□□□□ -1.87
LINC01088-205ENST00000509088 HAMPP81172 84 aa3.34□□□□□ -1.87
LINC01088-205ENST00000509088 SYCNQ0VAF6 134 aa3.34□□□□□ -1.87
LINC01088-205ENST00000509088 FAM74A4Q5TZK3 123 aa3.34□□□□□ -1.87
LINC01088-205ENST00000509088 LINC00269Q8N2A0 174 aa3.34□□□□□ -1.87
LINC01088-205ENST00000509088 NKAPP1Q8N9T2 125 aa3.34□□□□□ -1.87
LINC01088-205ENST00000509088 PLCE1Q9P212 2302 aa3.34□□□□□ -1.87
LINC01088-205ENST00000509088 CACNA1GO43497 2377 aa3.34□□□□□ -1.87
LINC01088-205ENST00000509088 CADP27708 2225 aa3.34□□□□□ -1.88
LINC01088-205ENST00000509088 GOLGB1Q14789 3259 aaKnown RBP3.33□□□□□ -1.88
LINC01088-205ENST00000509088 TRAV10A0A0B4J240 114 aa3.33□□□□□ -1.88
LINC01088-205ENST00000509088 TRBV6-4A0A1B0GX49 114 aa3.33□□□□□ -1.88
LINC01088-205ENST00000509088 EPOPA6NHQ4 379 aa3.33□□□□□ -1.88
LINC01088-205ENST00000509088 C8orf87E5RJ46 101 aa3.33□□□□□ -1.88
LINC01088-205ENST00000509088 K7EMT4 169 aa3.33□□□□□ -1.88
LINC01088-205ENST00000509088 GIG44P09565 113 aaPredicted RBP3.33□□□□□ -1.88
LINC01088-205ENST00000509088 FAM229BQ4G0N7 80 aa3.33□□□□□ -1.88
LINC01088-205ENST00000509088 UNQ9165/PRO28630Q6UXU0 137 aa3.33□□□□□ -1.88
LINC01088-205ENST00000509088 NTM-AS1Q6ZSK4 140 aa3.33□□□□□ -1.88
LINC01088-205ENST00000509088 DEFB108BQ8NET1 73 aa3.33□□□□□ -1.88
LINC01088-205ENST00000509088 DPM3Q9P2X0 92 aa3.33□□□□□ -1.88
LINC01088-205ENST00000509088 CDKN2A-AS1Q9UH64 79 aa3.33□□□□□ -1.88
LINC01088-205ENST00000509088 ASXL3Q9C0F0 2248 aa3.33□□□□□ -1.88
LINC01088-205ENST00000509088 FAM186AA6NE01 2351 aa3.33□□□□□ -1.88
LINC01088-205ENST00000509088 MUC4Q99102 2169 aa3.32□□□□□ -1.88
LINC01088-205ENST00000509088 DNAJC13O75165 2243 aa3.32□□□□□ -1.88
LINC01088-205ENST00000509088 DNAH12Q6ZR08 3092 aa3.32□□□□□ -1.88
LINC01088-205ENST00000509088 PINLYPA6NC86 204 aa3.32□□□□□ -1.88
LINC01088-205ENST00000509088 GNRH2O43555 120 aa3.32□□□□□ -1.88
LINC01088-205ENST00000509088 PSCAO43653 123 aa3.32□□□□□ -1.88
LINC01088-205ENST00000509088 IGHV1-46P01743 117 aa3.32□□□□□ -1.88
LINC01088-205ENST00000509088 CCL3L1P16619 93 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms