RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 GBF1Q92538 1859 aa2.2□□□□□ -2.06
SMARCA5-202ENST00000508573 CD163L1Q9NR16 1453 aa2.2□□□□□ -2.06
SMARCA5-202ENST00000508573 PRRC2BQ5JSZ5 2229 aaKnown RBP2.19□□□□□ -2.06
SMARCA5-202ENST00000508573 BAZ2BQ9UIF8 2168 aaKnown RBP2.19□□□□□ -2.06
SMARCA5-202ENST00000508573 ITSN2Q9NZM3 1697 aa2.19□□□□□ -2.06
SMARCA5-202ENST00000508573 A0A087WVE0 104 aa2.19□□□□□ -2.06
SMARCA5-202ENST00000508573 IGKV2-40A0A087WW87 121 aaPredicted RBP2.19□□□□□ -2.06
SMARCA5-202ENST00000508573 M0R3E3 92 aa2.19□□□□□ -2.06
SMARCA5-202ENST00000508573 IGKV2D-40P01614 121 aaPredicted RBP2.19□□□□□ -2.06
SMARCA5-202ENST00000508573 LINC00322Q6ZN03 302 aaPredicted RBP2.19□□□□□ -2.06
SMARCA5-202ENST00000508573 TMEM14CQ9P0S9 112 aa2.19□□□□□ -2.06
SMARCA5-202ENST00000508573 LINC01558Q9Y6Z2 57 aa2.19□□□□□ -2.06
SMARCA5-202ENST00000508573 R4GMQ9 66 aa2.19□□□□□ -2.06
SMARCA5-202ENST00000508573 DOCK10Q96BY6 2186 aa2.19□□□□□ -2.06
SMARCA5-202ENST00000508573 CDC42BPGQ6DT37 1551 aa2.19□□□□□ -2.06
SMARCA5-202ENST00000508573 LOC285556D6RIA3 1793 aa2.18□□□□□ -2.06
SMARCA5-202ENST00000508573 TRBV6-5A0A0K0K1A5 114 aa2.18□□□□□ -2.06
SMARCA5-202ENST00000508573 D6R8Y8 96 aa2.18□□□□□ -2.06
SMARCA5-202ENST00000508573 M0R135 149 aa2.18□□□□□ -2.06
SMARCA5-202ENST00000508573 INE1O15225 51 aa2.18□□□□□ -2.06
SMARCA5-202ENST00000508573 C3orf79P0CE67 100 aa2.18□□□□□ -2.06
SMARCA5-202ENST00000508573 HCP5Q6MZN7 132 aa2.18□□□□□ -2.06
SMARCA5-202ENST00000508573 Q6ZRN7 208 aaPredicted RBP2.18□□□□□ -2.06
SMARCA5-202ENST00000508573 COA5Q86WW8 74 aa2.18□□□□□ -2.06
SMARCA5-202ENST00000508573 MUSTN1Q8IVN3 82 aa2.18□□□□□ -2.06
SMARCA5-202ENST00000508573 TXNDC17Q9BRA2 123 aa2.18□□□□□ -2.06
SMARCA5-202ENST00000508573 V9GYV3 84 aa2.18□□□□□ -2.06
SMARCA5-202ENST00000508573 FANCD2Q9BXW9 1451 aa2.18□□□□□ -2.06
SMARCA5-202ENST00000508573 GLI2P10070 1586 aa2.18□□□□□ -2.06
SMARCA5-202ENST00000508573 RNF17Q9BXT8 1623 aaKnown RBP2.17□□□□□ -2.06
SMARCA5-202ENST00000508573 XRN1Q8IZH2 1706 aaKnown RBP2.17□□□□□ -2.06
SMARCA5-202ENST00000508573 IGKV2-24A0A0C4DH68 120 aa2.17□□□□□ -2.06
SMARCA5-202ENST00000508573 ZNF625Q96I27 306 aaPredicted RBP2.17□□□□□ -2.06
SMARCA5-202ENST00000508573 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
SMARCA5-202ENST00000508573 ADGRB2O60241 1585 aa2.17□□□□□ -2.06
SMARCA5-202ENST00000508573 TNRC6BQ9UPQ9 1833 aaKnown RBP2.17□□□□□ -2.06
SMARCA5-202ENST00000508573 PHRF1Q9P1Y6 1649 aaKnown RBP2.17□□□□□ -2.06
SMARCA5-202ENST00000508573 ALKQ9UM73 1620 aa2.17□□□□□ -2.06
SMARCA5-202ENST00000508573 COL4A1P02462 1669 aa2.16□□□□□ -2.06
SMARCA5-202ENST00000508573 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.16□□□□□ -2.06
SMARCA5-202ENST00000508573 LOC110117498A0A087WWA1 95 aa2.16□□□□□ -2.06
SMARCA5-202ENST00000508573 FXYD4P59646 89 aa2.16□□□□□ -2.06
SMARCA5-202ENST00000508573 MYO7BQ6PIF6 2116 aa2.16□□□□□ -2.06
SMARCA5-202ENST00000508573 IGFL1Q6UW32 110 aa2.16□□□□□ -2.06
SMARCA5-202ENST00000508573 LINC00208Q96KT6 92 aa2.16□□□□□ -2.06
SMARCA5-202ENST00000508573 WFDC6Q9BQY6 131 aa2.16□□□□□ -2.06
SMARCA5-202ENST00000508573 SNURFQ9Y675 71 aa2.16□□□□□ -2.06
SMARCA5-202ENST00000508573 PCDH15Q96QU1 1955 aa2.16□□□□□ -2.06
SMARCA5-202ENST00000508573 SIPA1L3O60292 1781 aaPredicted RBP2.15□□□□□ -2.06
SMARCA5-202ENST00000508573 TRBV7-4A0A0J9YYF1 115 aa2.15□□□□□ -2.07
SMARCA5-202ENST00000508573 CTXND1A0A1B0GTU2 59 aa2.15□□□□□ -2.07
SMARCA5-202ENST00000508573 M0R2N4 97 aa2.15□□□□□ -2.07
SMARCA5-202ENST00000508573 UQCR11O14957 56 aa2.15□□□□□ -2.07
SMARCA5-202ENST00000508573 S100A3P33764 101 aa2.15□□□□□ -2.07
SMARCA5-202ENST00000508573 IFI27P40305 119 aaPredicted RBP2.15□□□□□ -2.07
SMARCA5-202ENST00000508573 ZNF137PP52743 207 aa2.15□□□□□ -2.07
SMARCA5-202ENST00000508573 ATP5EP2Q5VTU8 51 aa2.15□□□□□ -2.07
SMARCA5-202ENST00000508573 BAGE2Q86Y30 109 aa2.15□□□□□ -2.07
SMARCA5-202ENST00000508573 Q96NJ1 140 aa2.15□□□□□ -2.07
SMARCA5-202ENST00000508573 PLAC8Q9NZF1 115 aa2.15□□□□□ -2.07
SMARCA5-202ENST00000508573 TET1Q8NFU7 2136 aa2.15□□□□□ -2.07
SMARCA5-202ENST00000508573 PIK3C2BO00750 1634 aa2.14□□□□□ -2.07
SMARCA5-202ENST00000508573 PAPPAQ13219 1627 aa2.14□□□□□ -2.07
SMARCA5-202ENST00000508573 FXYD6-FXYD2A0A087WZ82 144 aa2.14□□□□□ -2.07
SMARCA5-202ENST00000508573 SMIM5Q71RC9 77 aa2.14□□□□□ -2.07
SMARCA5-202ENST00000508573 ATP7BP35670 1465 aa2.14□□□□□ -2.07
SMARCA5-202ENST00000508573 RALGAPBQ86X10 1494 aa2.14□□□□□ -2.07
SMARCA5-202ENST00000508573 NHSL1Q5SYE7 1610 aa2.13□□□□□ -2.07
SMARCA5-202ENST00000508573 TOP2AP11388 1531 aaKnown RBP2.13□□□□□ -2.07
SMARCA5-202ENST00000508573 CLASP1Q7Z460 1538 aa2.13□□□□□ -2.07
SMARCA5-202ENST00000508573 RTTNQ86VV8 2226 aa2.13□□□□□ -2.07
SMARCA5-202ENST00000508573 SHPRHQ149N8 1683 aa2.13□□□□□ -2.07
SMARCA5-202ENST00000508573 PREX1Q8TCU6 1659 aa2.13□□□□□ -2.07
SMARCA5-202ENST00000508573 FN1P02751 2386 aaKnown RBP2.13□□□□□ -2.07
SMARCA5-202ENST00000508573 H3BVH4 76 aa2.13□□□□□ -2.07
SMARCA5-202ENST00000508573 IGKV4-1P06312 121 aa2.13□□□□□ -2.07
SMARCA5-202ENST00000508573 SPRR4Q96PI1 79 aa2.13□□□□□ -2.07
SMARCA5-202ENST00000508573 FREM1Q5H8C1 2179 aa2.13□□□□□ -2.07
SMARCA5-202ENST00000508573 ALPK2Q86TB3 2170 aa2.13□□□□□ -2.07
SMARCA5-202ENST00000508573 NKTRP30414 1462 aaKnown RBP2.13□□□□□ -2.07
SMARCA5-202ENST00000508573 ZNF236Q9UL36 1845 aa2.12□□□□□ -2.07
SMARCA5-202ENST00000508573 PLCH1Q4KWH8 1693 aa2.12□□□□□ -2.07
SMARCA5-202ENST00000508573 NUP188Q5SRE5 1749 aa2.12□□□□□ -2.07
SMARCA5-202ENST00000508573 CRYBG1Q9Y4K1 1723 aa2.12□□□□□ -2.07
SMARCA5-202ENST00000508573 BAGE3Q86Y29 109 aa2.12□□□□□ -2.07
SMARCA5-202ENST00000508573 DEFB107AQ8IZN7 70 aa2.12□□□□□ -2.07
SMARCA5-202ENST00000508573 LRP6O75581 1613 aa2.12□□□□□ -2.07
SMARCA5-202ENST00000508573 NESP48681 1621 aa2.12□□□□□ -2.07
SMARCA5-202ENST00000508573 ZNF831Q5JPB2 1677 aa2.12□□□□□ -2.07
SMARCA5-202ENST00000508573 ZMYM4Q5VZL5 1548 aa2.12□□□□□ -2.07
SMARCA5-202ENST00000508573 TRGV2A0A075B6R0 118 aa2.11□□□□□ -2.07
SMARCA5-202ENST00000508573 TRGV1A0A0A0MS02 117 aa2.11□□□□□ -2.07
SMARCA5-202ENST00000508573 TRAV1-2A0A0B4J238 106 aa2.11□□□□□ -2.07
SMARCA5-202ENST00000508573 MGPP08493 103 aa2.11□□□□□ -2.07
SMARCA5-202ENST00000508573 LINC00846Q9NV44 126 aa2.11□□□□□ -2.07
SMARCA5-202ENST00000508573 SDK1Q7Z5N4 2213 aa2.11□□□□□ -2.07
SMARCA5-202ENST00000508573 MROH2AA6NES4 1674 aa2.11□□□□□ -2.07
SMARCA5-202ENST00000508573 DIP2AQ14689 1571 aa2.1□□□□□ -2.07
SMARCA5-202ENST00000508573 COL5A1P20908 1838 aaPredicted RBP2.1□□□□□ -2.07
SMARCA5-202ENST00000508573 WIZO95785 1651 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms