RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 CELA1Q9UNI1 258 aa5.31□□□□□ -1.56
UBE2D3-224ENST00000508474 GVINP1Q7Z2Y8 2422 aa5.3□□□□□ -1.56
UBE2D3-224ENST00000508474 PLXNB1O43157 2135 aa5.3□□□□□ -1.56
UBE2D3-224ENST00000508474 C4orf48Q5BLP8 95 aa5.3□□□□□ -1.56
UBE2D3-224ENST00000508474 MUC22E2RYF6 1773 aaPredicted RBP5.3□□□□□ -1.56
UBE2D3-224ENST00000508474 LRCOL1A6NCL2 159 aa5.3□□□□□ -1.56
UBE2D3-224ENST00000508474 HILS1P60008 231 aa5.3□□□□□ -1.56
UBE2D3-224ENST00000508474 COX6A2Q02221 97 aa5.3□□□□□ -1.56
UBE2D3-224ENST00000508474 HIGD2AQ9BW72 106 aa5.3□□□□□ -1.56
UBE2D3-224ENST00000508474 A0A1W2PNU3 283 aaPredicted RBP5.3□□□□□ -1.56
UBE2D3-224ENST00000508474 SPTBN2O15020 2390 aa5.29□□□□□ -1.56
UBE2D3-224ENST00000508474 hDV103S1A0JD37 113 aa5.29□□□□□ -1.56
UBE2D3-224ENST00000508474 SYCNQ0VAF6 134 aa5.29□□□□□ -1.56
UBE2D3-224ENST00000508474 CACNA1BQ00975 2339 aa5.29□□□□□ -1.56
UBE2D3-224ENST00000508474 DEFB135Q30KP9 77 aa5.29□□□□□ -1.56
UBE2D3-224ENST00000508474 LINC01561Q8N1V8 128 aa5.29□□□□□ -1.56
UBE2D3-224ENST00000508474 LINC00208Q96KT6 92 aa5.29□□□□□ -1.56
UBE2D3-224ENST00000508474 ZNF580Q9UK33 172 aa5.29□□□□□ -1.56
UBE2D3-224ENST00000508474 COL6A6A6NMZ7 2263 aa5.29□□□□□ -1.56
UBE2D3-224ENST00000508474 NOTCH3Q9UM47 2321 aa5.29□□□□□ -1.56
UBE2D3-224ENST00000508474 LTBP2Q14767 1821 aa5.29□□□□□ -1.56
UBE2D3-224ENST00000508474 CACNA1GO43497 2377 aa5.29□□□□□ -1.56
UBE2D3-224ENST00000508474 NCOR1O75376 2440 aa5.29□□□□□ -1.56
UBE2D3-224ENST00000508474 WISP2O76076 250 aa5.28□□□□□ -1.56
UBE2D3-224ENST00000508474 IGLV1-40P01703 118 aa5.28□□□□□ -1.56
UBE2D3-224ENST00000508474 EP300Q09472 2414 aaPredicted RBP5.28□□□□□ -1.56
UBE2D3-224ENST00000508474 ZNF843Q8N446 348 aa5.28□□□□□ -1.56
UBE2D3-224ENST00000508474 CNOT1A5YKK6 2376 aaKnown RBP5.28□□□□□ -1.56
UBE2D3-224ENST00000508474 CPAMD8Q8IZJ3 1885 aa5.28□□□□□ -1.56
UBE2D3-224ENST00000508474 F8W735 103 aaPredicted RBP5.28□□□□□ -1.56
UBE2D3-224ENST00000508474 BRI3O95415 125 aa5.28□□□□□ -1.56
UBE2D3-224ENST00000508474 LINC00575Q6W349 94 aa5.28□□□□□ -1.56
UBE2D3-224ENST00000508474 IGLV5-39A0A0G2JS06 123 aa5.27□□□□□ -1.57
UBE2D3-224ENST00000508474 KIF25-AS1Q9Y6Z4 181 aa5.27□□□□□ -1.57
UBE2D3-224ENST00000508474 DEFB113Q30KQ7 82 aa5.27□□□□□ -1.57
UBE2D3-224ENST00000508474 Q6YL49 198 aa5.27□□□□□ -1.57
UBE2D3-224ENST00000508474 LELP1Q5T871 98 aa5.26□□□□□ -1.57
UBE2D3-224ENST00000508474 LINC00337Q8N6G1 96 aa5.26□□□□□ -1.57
UBE2D3-224ENST00000508474 C1orf137Q5JT78 98 aa5.26□□□□□ -1.57
UBE2D3-224ENST00000508474 COL5A1P20908 1838 aaPredicted RBP5.26□□□□□ -1.57
UBE2D3-224ENST00000508474 ABCA4P78363 2273 aa5.26□□□□□ -1.57
UBE2D3-224ENST00000508474 C10orf142B7Z368 130 aa5.26□□□□□ -1.57
UBE2D3-224ENST00000508474 NHLRC4P0CG21 123 aaPredicted RBP5.26□□□□□ -1.57
UBE2D3-224ENST00000508474 ACACAQ13085 2346 aa5.26□□□□□ -1.57
UBE2D3-224ENST00000508474 BEAN1Q3B7T3 259 aa5.26□□□□□ -1.57
UBE2D3-224ENST00000508474 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.26□□□□□ -1.573e-7■■■□□ 18.2
UBE2D3-224ENST00000508474 DEFB4AO15263 64 aa5.25□□□□□ -1.57
UBE2D3-224ENST00000508474 C11orf71Q6IPW1 123 aa5.25□□□□□ -1.57
UBE2D3-224ENST00000508474 CYSRT1A8MQ03 144 aa5.25□□□□□ -1.57
UBE2D3-224ENST00000508474 EGFEM1PQ0D2K5 195 aa5.25□□□□□ -1.57
UBE2D3-224ENST00000508474 A0A0J9YWU9 116 aa5.25□□□□□ -1.57
UBE2D3-224ENST00000508474 IGKV2-28A0A075B6P5 120 aa5.25□□□□□ -1.57
UBE2D3-224ENST00000508474 IGKV2D-28P01615 120 aa5.25□□□□□ -1.57
UBE2D3-224ENST00000508474 LOC100131303A0A0U1RQF7 123 aa5.24□□□□□ -1.57
UBE2D3-224ENST00000508474 A0A1B0GW54 56 aa5.24□□□□□ -1.57
UBE2D3-224ENST00000508474 BBC3Q96PG8 261 aaPredicted RBP5.24□□□□□ -1.57
UBE2D3-224ENST00000508474 PCNX1Q96RV3 2341 aa5.24□□□□□ -1.57
UBE2D3-224ENST00000508474 IGLV5-45A0A087WSX0 123 aa5.23□□□□□ -1.57
UBE2D3-224ENST00000508474 NANOS2P60321 138 aaKnown RBP5.23□□□□□ -1.57
UBE2D3-224ENST00000508474 C10orf25Q5T742 122 aa5.23□□□□□ -1.57
UBE2D3-224ENST00000508474 Q8NA96 180 aa5.23□□□□□ -1.57
UBE2D3-224ENST00000508474 PRR14LQ5THK1 2151 aa5.23□□□□□ -1.57
UBE2D3-224ENST00000508474 AGRNO00468 2067 aa5.23□□□□□ -1.57
UBE2D3-224ENST00000508474 HCG22E2RYF7 251 aa5.23□□□□□ -1.57
UBE2D3-224ENST00000508474 F8WDY8 70 aa5.23□□□□□ -1.57
UBE2D3-224ENST00000508474 FAM19A4Q96LR4 140 aa5.23□□□□□ -1.57
UBE2D3-224ENST00000508474 H0Y9P7 68 aa5.23□□□□□ -1.57
UBE2D3-224ENST00000508474 ARHGAP32A7KAX9 2087 aa5.23□□□□□ -1.57
UBE2D3-224ENST00000508474 ZNF706Q9Y5V0 76 aaPredicted RBP5.22□□□□□ -1.57
UBE2D3-224ENST00000508474 LOC110117498A0A087WWA1 95 aa5.22□□□□□ -1.57
UBE2D3-224ENST00000508474 IGKV2-24A0A0C4DH68 120 aa5.22□□□□□ -1.57
UBE2D3-224ENST00000508474 ERC2-IT1O76042 136 aa5.22□□□□□ -1.57
UBE2D3-224ENST00000508474 UNQ6190/PRO20217Q6UXQ8 127 aa5.22□□□□□ -1.57
UBE2D3-224ENST00000508474 LINC00315P59091 139 aa5.22□□□□□ -1.57
UBE2D3-224ENST00000508474 A0A1B0GUV1 79 aa5.22□□□□□ -1.57
UBE2D3-224ENST00000508474 FHL3Q13643 280 aa5.22□□□□□ -1.57
UBE2D3-224ENST00000508474 Q8N2B8 174 aa5.21□□□□□ -1.57
UBE2D3-224ENST00000508474 WIPF1O43516 503 aa5.21□□□□□ -1.58
UBE2D3-224ENST00000508474 PRR3P79522 188 aaKnown RBP5.21□□□□□ -1.58
UBE2D3-224ENST00000508474 MED13LQ71F56 2210 aa5.21□□□□□ -1.58
UBE2D3-224ENST00000508474 A0A096LNI7 61 aa5.21□□□□□ -1.58
UBE2D3-224ENST00000508474 DNAJC9-AS1A6NH13 148 aa5.21□□□□□ -1.58
UBE2D3-224ENST00000508474 FHL2Q14192 279 aa5.21□□□□□ -1.58
UBE2D3-224ENST00000508474 IGLV4-60A0A075B6I1 120 aa5.21□□□□□ -1.58
UBE2D3-224ENST00000508474 H3BPC8 53 aa5.2□□□□□ -1.58
UBE2D3-224ENST00000508474 VPREB1P12018 145 aa5.2□□□□□ -1.58
UBE2D3-224ENST00000508474 SPATA3Q8NHX4 192 aa5.2□□□□□ -1.58
UBE2D3-224ENST00000508474 FAM218AQ96MZ4 157 aa5.2□□□□□ -1.58
UBE2D3-224ENST00000508474 ZNF702PQ9H963 129 aa5.2□□□□□ -1.58
UBE2D3-224ENST00000508474 NAV3Q8IVL0 2385 aa5.2□□□□□ -1.58
UBE2D3-224ENST00000508474 SRCAPQ6ZRS2 3230 aa5.2□□□□□ -1.58
UBE2D3-224ENST00000508474 GPR179Q6PRD1 2367 aa5.2□□□□□ -1.58
UBE2D3-224ENST00000508474 LINC00482Q8N8I6 264 aa5.2□□□□□ -1.58
UBE2D3-224ENST00000508474 Q6ZQT0 140 aa5.19□□□□□ -1.58
UBE2D3-224ENST00000508474 C11orf45Q8TAV5 145 aa5.19□□□□□ -1.58
UBE2D3-224ENST00000508474 SMCR5Q8TEV8 140 aa5.19□□□□□ -1.58
UBE2D3-224ENST00000508474 C9orf116Q5BN46 136 aaPredicted RBP5.19□□□□□ -1.58
UBE2D3-224ENST00000508474 C10orf99Q6UWK7 81 aa5.19□□□□□ -1.58
UBE2D3-224ENST00000508474 PRM2P04554 102 aa5.19□□□□□ -1.58
UBE2D3-224ENST00000508474 Q6ZSN1 163 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms