RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 FAM19A3Q7Z5A8 133 aa7.73□□□□□ -1.17
LIN54-207ENST00000508171 CLEC2BQ92478 149 aa7.73□□□□□ -1.17
LIN54-207ENST00000508171 F5H768 121 aa7.73□□□□□ -1.17
LIN54-207ENST00000508171 UBE2L6O14933 153 aa7.72□□□□□ -1.17
LIN54-207ENST00000508171 MT-ATP8P03928 68 aa7.72□□□□□ -1.17
LIN54-207ENST00000508171 RPL13AP40429 203 aaKnown RBP7.72□□□□□ -1.17
LIN54-207ENST00000508171 CMC4P56277 68 aaPredicted RBP7.72□□□□□ -1.17
LIN54-207ENST00000508171 CIRBPQ14011 172 aaKnown RBP7.72□□□□□ -1.17
LIN54-207ENST00000508171 LINC00308Q8TCZ7 52 aa7.72□□□□□ -1.17
LIN54-207ENST00000508171 TMEM243Q9BU79 118 aa7.72□□□□□ -1.17
LIN54-207ENST00000508171 HIVEP2P31629 2446 aa7.72□□□□□ -1.17
LIN54-207ENST00000508171 TRGV4A0A0C4DH28 118 aa7.72□□□□□ -1.17
LIN54-207ENST00000508171 IFITM1P13164 125 aa7.72□□□□□ -1.17
LIN54-207ENST00000508171 XGP55808 180 aa7.72□□□□□ -1.17
LIN54-207ENST00000508171 NTN5Q8WTR8 489 aaPredicted RBP7.72□□□□□ -1.17
LIN54-207ENST00000508171 SCGB1A1P11684 91 aa7.71□□□□□ -1.17
LIN54-207ENST00000508171 SOSTDC1Q6X4U4 206 aa7.71□□□□□ -1.17
LIN54-207ENST00000508171 RNF183Q96D59 192 aa7.71□□□□□ -1.17
LIN54-207ENST00000508171 OVOL2Q9BRP0 275 aa7.71□□□□□ -1.17
LIN54-207ENST00000508171 IGKV3OR2-268A0A0C4DH90 116 aa7.71□□□□□ -1.18
LIN54-207ENST00000508171 TEX49A0A1B0GTD5 131 aa7.71□□□□□ -1.18
LIN54-207ENST00000508171 PRIMA1Q86XR5 153 aa7.71□□□□□ -1.18
LIN54-207ENST00000508171 FAM110AQ9BQ89 295 aa7.71□□□□□ -1.18
LIN54-207ENST00000508171 TRBV6-4A0A1B0GX49 114 aa7.7□□□□□ -1.18
LIN54-207ENST00000508171 H7C423 109 aa7.7□□□□□ -1.18
LIN54-207ENST00000508171 KRTAP10-3P60369 221 aa7.7□□□□□ -1.18
LIN54-207ENST00000508171 GAGE6Q13070 117 aa7.7□□□□□ -1.18
LIN54-207ENST00000508171 FHL2Q14192 279 aa7.7□□□□□ -1.18
LIN54-207ENST00000508171 TRBV10-2A0A0K0K1G8 114 aa7.7□□□□□ -1.18
LIN54-207ENST00000508171 M0QXV9 152 aa7.7□□□□□ -1.18
LIN54-207ENST00000508171 HILS1P60008 231 aa7.7□□□□□ -1.18
LIN54-207ENST00000508171 IGLV4-60A0A075B6I1 120 aa7.69□□□□□ -1.18
LIN54-207ENST00000508171 COX6CP09669 75 aa7.69□□□□□ -1.18
LIN54-207ENST00000508171 MEIG1Q5JSS6 88 aa7.69□□□□□ -1.18
LIN54-207ENST00000508171 DEFB130BP0DP73 79 aa7.68□□□□□ -1.18
LIN54-207ENST00000508171 DEFB130AP0DP74 79 aa7.68□□□□□ -1.18
LIN54-207ENST00000508171 OTOGQ6ZRI0 2925 aa7.68□□□□□ -1.18
LIN54-207ENST00000508171 C2orf82Q6UX34 121 aa7.68□□□□□ -1.18
LIN54-207ENST00000508171 NOTCH2Q04721 2471 aa7.68□□□□□ -1.18
LIN54-207ENST00000508171 TENM1Q9UKZ4 2725 aa7.67□□□□□ -1.18
LIN54-207ENST00000508171 TRBV6-8A0A0A6YYG3 113 aa7.67□□□□□ -1.18
LIN54-207ENST00000508171 LST1O00453 97 aa7.67□□□□□ -1.18
LIN54-207ENST00000508171 HECTD1Q9ULT8 2610 aa7.67□□□□□ -1.18
LIN54-207ENST00000508171 CRLF1O75462 422 aa7.66□□□□□ -1.18
LIN54-207ENST00000508171 LINC01600Q96MT4 127 aa7.66□□□□□ -1.18
LIN54-207ENST00000508171 CHCHD5Q9BSY4 110 aa7.66□□□□□ -1.18
LIN54-207ENST00000508171 TOMM7Q9P0U1 55 aa7.66□□□□□ -1.18
LIN54-207ENST00000508171 SPATA3Q8NHX4 192 aa7.66□□□□□ -1.18
LIN54-207ENST00000508171 KMT2BQ9UMN6 2715 aaPredicted RBP7.66□□□□□ -1.18
LIN54-207ENST00000508171 J3QKU1 62 aa7.65□□□□□ -1.18
LIN54-207ENST00000508171 PF4P02776 101 aa7.65□□□□□ -1.18
LIN54-207ENST00000508171 TMEM262E9PQX1 116 aa7.65□□□□□ -1.19
LIN54-207ENST00000508171 HERV-K104P63124 156 aa7.64□□□□□ -1.19
LIN54-207ENST00000508171 COX7B2Q8TF08 81 aa7.64□□□□□ -1.19
LIN54-207ENST00000508171 UBE2WQ96B02 151 aa7.64□□□□□ -1.19
LIN54-207ENST00000508171 IGHV3OR16-9A0A0B4J2B5 98 aa7.64□□□□□ -1.19
LIN54-207ENST00000508171 SHISA2Q6UWI4 295 aa7.64□□□□□ -1.19
LIN54-207ENST00000508171 LINC00482Q8N8I6 264 aa7.64□□□□□ -1.19
LIN54-207ENST00000508171 CKS1BP61024 79 aa7.63□□□□□ -1.19
LIN54-207ENST00000508171 CFAP161Q6P656 301 aa7.63□□□□□ -1.19
LIN54-207ENST00000508171 C5orf38Q86SI9 138 aa7.63□□□□□ -1.19
LIN54-207ENST00000508171 H3BT86 120 aa7.63□□□□□ -1.19
LIN54-207ENST00000508171 MIR7-3HGQ8N6C7 128 aa7.63□□□□□ -1.19
LIN54-207ENST00000508171 A0A096LPF7 62 aa7.62□□□□□ -1.19
LIN54-207ENST00000508171 GYPEP15421 78 aa7.62□□□□□ -1.19
LIN54-207ENST00000508171 TRRAPQ9Y4A5 3859 aa7.62□□□□□ -1.19
LIN54-207ENST00000508171 COX7A2LO14548 114 aa7.62□□□□□ -1.19
LIN54-207ENST00000508171 KIR2DL5BQ8NHK3 375 aa7.62□□□□□ -1.19
LIN54-207ENST00000508171 COPS9Q8WXC6 57 aa7.62□□□□□ -1.19
LIN54-207ENST00000508171 X6R8D5 127 aa7.62□□□□□ -1.19
LIN54-207ENST00000508171 TRAV8-4A0A0B4J246 113 aa7.61□□□□□ -1.19
LIN54-207ENST00000508171 LY6G6DO95868 133 aa7.61□□□□□ -1.19
LIN54-207ENST00000508171 LINC00959A0A1B0GUT2 108 aa7.6□□□□□ -1.19
LIN54-207ENST00000508171 A0A1B0GV72 72 aa7.6□□□□□ -1.19
LIN54-207ENST00000508171 DEFB4AO15263 64 aa7.6□□□□□ -1.19
LIN54-207ENST00000508171 IGKV2-28A0A075B6P5 120 aa7.6□□□□□ -1.19
LIN54-207ENST00000508171 A0A087WZ39 114 aa7.6□□□□□ -1.19
LIN54-207ENST00000508171 IGKV2D-28P01615 120 aa7.6□□□□□ -1.19
LIN54-207ENST00000508171 LINC00158P58513 81 aa7.6□□□□□ -1.19
LIN54-207ENST00000508171 LINC00337Q8N6G1 96 aa7.6□□□□□ -1.19
LIN54-207ENST00000508171 LINC00612Q8N6U2 182 aa7.6□□□□□ -1.19
LIN54-207ENST00000508171 FAM218AQ96MZ4 157 aa7.6□□□□□ -1.19
LIN54-207ENST00000508171 PFN2P35080 140 aa7.59□□□□□ -1.19
LIN54-207ENST00000508171 CLPSL2Q6UWE3 100 aa7.59□□□□□ -1.19
LIN54-207ENST00000508171 C11orf68Q9H3H3 251 aaKnown RBP7.59□□□□□ -1.19
LIN54-207ENST00000508171 NSD1Q96L73 2696 aaPredicted RBP7.59□□□□□ -1.19
LIN54-207ENST00000508171 XCL1P47992 114 aa7.59□□□□□ -1.19
LIN54-207ENST00000508171 CITED1Q99966 193 aa7.59□□□□□ -1.19
LIN54-207ENST00000508171 SND1-IT1Q9HBX3 110 aa7.59□□□□□ -1.19
LIN54-207ENST00000508171 ATRQ13535 2644 aa7.59□□□□□ -1.19
LIN54-207ENST00000508171 TRAV26-1A0A087WT03 109 aa7.58□□□□□ -1.2
LIN54-207ENST00000508171 FAM222AQ5U5X8 452 aa7.58□□□□□ -1.2
LIN54-207ENST00000508171 CCL18P55774 89 aa7.57□□□□□ -1.2
LIN54-207ENST00000508171 SNCGO76070 127 aa7.57□□□□□ -1.2
LIN54-207ENST00000508171 DEFB135Q30KP9 77 aa7.57□□□□□ -1.2
LIN54-207ENST00000508171 PRO0255Q9UI72 69 aa7.57□□□□□ -1.2
LIN54-207ENST00000508171 C6orf226Q5I0X4 101 aa7.56□□□□□ -1.2
LIN54-207ENST00000508171 DEFB121Q5J5C9 76 aa7.56□□□□□ -1.2
LIN54-207ENST00000508171 C15orf53Q8NAA6 179 aa7.56□□□□□ -1.2
LIN54-207ENST00000508171 TRAV13-2A0A0B4J235 113 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms