RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 COX7A2LO14548 114 aa11.41□□□□□ -0.58
SMN1-204ENST00000506163 MT-ND6P03923 174 aa11.41□□□□□ -0.58
SMN1-204ENST00000506163 LINC00173Q6ZV60 143 aa11.41□□□□□ -0.58
SMN1-204ENST00000506163 TMEM141Q96I45 108 aa11.41□□□□□ -0.58
SMN1-204ENST00000506163 SRRM2Q9UQ35 2752 aaKnown RBP11.4□□□□□ -0.58
SMN1-204ENST00000506163 IGHV3OR16-9A0A0B4J2B5 98 aa11.4□□□□□ -0.58
SMN1-204ENST00000506163 IGHV3-64A0A075B6Q5 118 aa11.39□□□□□ -0.59
SMN1-204ENST00000506163 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.39□□□□□ -0.59
SMN1-204ENST00000506163 CHTF8P0CG12 524 aa11.39□□□□□ -0.59
SMN1-204ENST00000506163 COX6A2Q02221 97 aa11.39□□□□□ -0.59
SMN1-204ENST00000506163 CIRBPQ14011 172 aaKnown RBP11.39□□□□□ -0.59
SMN1-204ENST00000506163 PRSS3P2Q8NHM4 247 aa11.39□□□□□ -0.59
SMN1-204ENST00000506163 AMELXQ99217 191 aa11.39□□□□□ -0.59
SMN1-204ENST00000506163 LINC00242Q5T6M2 205 aa11.38□□□□□ -0.59
SMN1-204ENST00000506163 TOMM6Q96B49 74 aa11.38□□□□□ -0.59
SMN1-204ENST00000506163 TRAPPC1Q9Y5R8 145 aa11.38□□□□□ -0.59
SMN1-204ENST00000506163 MALP21145 153 aa11.37□□□□□ -0.59
SMN1-204ENST00000506163 IGLV4-69A0A075B6H9 119 aa11.36□□□□□ -0.59
SMN1-204ENST00000506163 UBE2D1P51668 147 aa11.36□□□□□ -0.59
SMN1-204ENST00000506163 LINC00528Q8N1L1 170 aa11.36□□□□□ -0.59
SMN1-204ENST00000506163 URB1-AS1Q96HZ7 61 aa11.36□□□□□ -0.59
SMN1-204ENST00000506163 FAM229AH3BQW9 127 aa11.35□□□□□ -0.59
SMN1-204ENST00000506163 TEX43Q6ZNM6 134 aa11.35□□□□□ -0.59
SMN1-204ENST00000506163 ZNF561-AS1K7EIQ3 104 aa11.35□□□□□ -0.59
SMN1-204ENST00000506163 CBLN2Q8IUK8 224 aa11.35□□□□□ -0.59
SMN1-204ENST00000506163 C18orf32Q8TCD1 76 aa11.35□□□□□ -0.59
SMN1-204ENST00000506163 VCX2Q9H322 139 aa11.35□□□□□ -0.59
SMN1-204ENST00000506163 NPSP0C0P6 89 aa11.34□□□□□ -0.59
SMN1-204ENST00000506163 KRTAP10-4P60372 401 aaPredicted RBP11.34□□□□□ -0.59
SMN1-204ENST00000506163 SYCNQ0VAF6 134 aa11.34□□□□□ -0.59
SMN1-204ENST00000506163 SPACA4Q8TDM5 124 aa11.34□□□□□ -0.59
SMN1-204ENST00000506163 CARD19Q96LW7 228 aa11.34□□□□□ -0.59
SMN1-204ENST00000506163 TIMM17AQ99595 171 aa11.34□□□□□ -0.59
SMN1-204ENST00000506163 FLG2Q5D862 2391 aaPredicted RBP11.33□□□□□ -0.6
SMN1-204ENST00000506163 Q6ZRU5 148 aa11.33□□□□□ -0.6
SMN1-204ENST00000506163 A0A087WZ39 114 aa11.32□□□□□ -0.6
SMN1-204ENST00000506163 A0A096LNJ9 63 aa11.32□□□□□ -0.6
SMN1-204ENST00000506163 Q6ZN92 141 aa11.32□□□□□ -0.6
SMN1-204ENST00000506163 FA2HQ7L5A8 372 aa11.32□□□□□ -0.6
SMN1-204ENST00000506163 SCGB3A1Q96QR1 104 aa11.32□□□□□ -0.6
SMN1-204ENST00000506163 A0A087WYN8 130 aa11.31□□□□□ -0.6
SMN1-204ENST00000506163 A0A096LNI7 61 aa11.31□□□□□ -0.6
SMN1-204ENST00000506163 APOMO95445 188 aa11.31□□□□□ -0.6
SMN1-204ENST00000506163 G0S2P27469 103 aa11.31□□□□□ -0.6
SMN1-204ENST00000506163 SPAG11BQ08648 103 aa11.31□□□□□ -0.6
SMN1-204ENST00000506163 ERASQ7Z444 233 aa11.31□□□□□ -0.6
SMN1-204ENST00000506163 FAM19A3Q7Z5A8 133 aa11.31□□□□□ -0.6
SMN1-204ENST00000506163 SVIPQ8NHG7 77 aa11.31□□□□□ -0.6
SMN1-204ENST00000506163 ORAOV1Q8WV07 137 aa11.31□□□□□ -0.6
SMN1-204ENST00000506163 INAFM2P0DMQ5 153 aa11.3□□□□□ -0.6
SMN1-204ENST00000506163 C2orf48Q96LS8 159 aa11.3□□□□□ -0.6
SMN1-204ENST00000506163 C2orf88Q9BSF0 95 aa11.3□□□□□ -0.6
SMN1-204ENST00000506163 SMCO4Q9NRQ5 59 aa11.3□□□□□ -0.6
SMN1-204ENST00000506163 IGKV2-24A0A0C4DH68 120 aa11.29□□□□□ -0.6
SMN1-204ENST00000506163 KIAA0087Q14695 138 aa11.29□□□□□ -0.6
SMN1-204ENST00000506163 OR10D4PQ8NGN7 298 aa11.29□□□□□ -0.6
SMN1-204ENST00000506163 CAMK2N2Q96S95 79 aa11.29□□□□□ -0.6
SMN1-204ENST00000506163 C10orf25Q5T742 122 aa11.28□□□□□ -0.6
SMN1-204ENST00000506163 A0A0J9YXV3 536 aa11.27□□□□□ -0.6
SMN1-204ENST00000506163 LINC00614P0C842 121 aa11.27□□□□□ -0.6
SMN1-204ENST00000506163 PMCHL1Q16048 86 aa11.27□□□□□ -0.6
SMN1-204ENST00000506163 MAJINQ3KP22 176 aa11.27□□□□□ -0.6
SMN1-204ENST00000506163 DPH3Q96FX2 82 aa11.27□□□□□ -0.6
SMN1-204ENST00000506163 PLAC8Q9NZF1 115 aa11.27□□□□□ -0.6
SMN1-204ENST00000506163 MYCBP2O75592 4640 aa11.27□□□□□ -0.61
SMN1-204ENST00000506163 PAPPA-AS1Q5QFB9 102 aa11.26□□□□□ -0.61
SMN1-204ENST00000506163 UNQ6190/PRO20217Q6UXQ8 127 aa11.26□□□□□ -0.61
SMN1-204ENST00000506163 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.26□□□□□ -0.61
SMN1-204ENST00000506163 PLA2G1BP04054 148 aaKnown RBP11.26□□□□□ -0.61
SMN1-204ENST00000506163 CST9LQ9H4G1 147 aa11.26□□□□□ -0.61
SMN1-204ENST00000506163 CDKN2A-AS1Q9UH64 79 aa11.26□□□□□ -0.61
SMN1-204ENST00000506163 LINC01561Q8N1V8 128 aa11.25□□□□□ -0.61
SMN1-204ENST00000506163 PTTG1IPP53801 180 aa11.24□□□□□ -0.61
SMN1-204ENST00000506163 MRPL35Q9NZE8 188 aaKnown RBP11.24□□□□□ -0.61
SMN1-204ENST00000506163 LOC107984640A0A0U1RRK4 108 aa11.23□□□□□ -0.61
SMN1-204ENST00000506163 LINC01549A6NIU2 74 aa11.23□□□□□ -0.61
SMN1-204ENST00000506163 RNF151Q2KHN1 245 aa11.23□□□□□ -0.61
SMN1-204ENST00000506163 PDZD11Q5EBL8 140 aa11.23□□□□□ -0.61
SMN1-204ENST00000506163 C2orf82Q6UX34 121 aa11.23□□□□□ -0.61
SMN1-204ENST00000506163 STPG4Q8N801 248 aa11.23□□□□□ -0.61
SMN1-204ENST00000506163 C6orf48Q9UBA6 75 aa11.23□□□□□ -0.61
SMN1-204ENST00000506163 HERVK_113P63121 156 aa11.22□□□□□ -0.61
SMN1-204ENST00000506163 GAGE2BQ13066 116 aa11.22□□□□□ -0.61
SMN1-204ENST00000506163 PKHD1L1Q86WI1 4243 aa11.22□□□□□ -0.61
SMN1-204ENST00000506163 COLCA2A8K830 154 aa11.21□□□□□ -0.61
SMN1-204ENST00000506163 F8WDY8 70 aa11.21□□□□□ -0.61
SMN1-204ENST00000506163 NDUFA1O15239 70 aa11.21□□□□□ -0.61
SMN1-204ENST00000506163 TRGC2P03986 189 aa11.21□□□□□ -0.61
SMN1-204ENST00000506163 PMVKQ15126 192 aa11.21□□□□□ -0.61
SMN1-204ENST00000506163 TINCRA0A1B0GVN0 87 aa11.2□□□□□ -0.62
SMN1-204ENST00000506163 HBDP02042 147 aa11.2□□□□□ -0.62
SMN1-204ENST00000506163 HNRNPA3P51991 378 aaKnown RBP11.2□□□□□ -0.62
SMN1-204ENST00000506163 SEC11AP67812 179 aa11.2□□□□□ -0.62
SMN1-204ENST00000506163 GEMIN7Q9H840 131 aaKnown RBP11.2□□□□□ -0.62
SMN1-204ENST00000506163 IGLV5-45A0A087WSX0 123 aa11.19□□□□□ -0.62
SMN1-204ENST00000506163 RAB5BP61020 215 aa11.19□□□□□ -0.62
SMN1-204ENST00000506163 RPL37AP61513 92 aaKnown RBP11.19□□□□□ -0.62
SMN1-204ENST00000506163 A0A1W2PNN7 141 aa11.18□□□□□ -0.62
SMN1-204ENST00000506163 LINC00469Q8N7U9 141 aa11.18□□□□□ -0.62
SMN1-204ENST00000506163 LINC00474Q9P2X8 69 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms