RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 TRBV6-5A0A0K0K1A5 114 aa8.99□□□□□ -0.97
PDLIM7-211ENST00000504318 SCGB1D1O95968 90 aa8.99□□□□□ -0.97
PDLIM7-211ENST00000504318 HBDP02042 147 aa8.99□□□□□ -0.97
PDLIM7-211ENST00000504318 KRTDAPP60985 99 aa8.99□□□□□ -0.97
PDLIM7-211ENST00000504318 COTL1Q14019 142 aa8.99□□□□□ -0.97
PDLIM7-211ENST00000504318 ST20Q9HBF5 79 aa8.99□□□□□ -0.97
PDLIM7-211ENST00000504318 FAT3Q8TDW7 4589 aa8.98□□□□□ -0.97
PDLIM7-211ENST00000504318 G0S2P27469 103 aa8.98□□□□□ -0.97
PDLIM7-211ENST00000504318 CNBPP62633 177 aaKnown RBP8.98□□□□□ -0.97
PDLIM7-211ENST00000504318 S100A12P80511 92 aa8.98□□□□□ -0.97
PDLIM7-211ENST00000504318 CIRBPQ14011 172 aaKnown RBP8.98□□□□□ -0.97
PDLIM7-211ENST00000504318 SDIM1Q6ZPB5 146 aa8.98□□□□□ -0.97
PDLIM7-211ENST00000504318 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.98□□□□□ -0.97
PDLIM7-211ENST00000504318 C20orf202A1L168 122 aa8.97□□□□□ -0.97
PDLIM7-211ENST00000504318 SDHAF1A6NFY7 115 aa8.97□□□□□ -0.97
PDLIM7-211ENST00000504318 TCAPO15273 167 aa8.97□□□□□ -0.97
PDLIM7-211ENST00000504318 PLA2G1BP04054 148 aaKnown RBP8.97□□□□□ -0.97
PDLIM7-211ENST00000504318 ORMDL2Q53FV1 153 aa8.97□□□□□ -0.97
PDLIM7-211ENST00000504318 C15orf56Q8N910 161 aa8.97□□□□□ -0.97
PDLIM7-211ENST00000504318 MAP1LC3CQ9BXW4 147 aa8.97□□□□□ -0.97
PDLIM7-211ENST00000504318 LINC01549A6NIU2 74 aa8.96□□□□□ -0.98
PDLIM7-211ENST00000504318 C3orf79P0CE67 100 aa8.96□□□□□ -0.98
PDLIM7-211ENST00000504318 FCER1GP30273 86 aa8.96□□□□□ -0.98
PDLIM7-211ENST00000504318 PMCHL1Q16048 86 aa8.96□□□□□ -0.98
PDLIM7-211ENST00000504318 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.95□□□□□ -0.98
PDLIM7-211ENST00000504318 IGKV2-29A2NJV5 120 aaPredicted RBP8.95□□□□□ -0.98
PDLIM7-211ENST00000504318 KRTAP29-1A8MX34 341 aaPredicted RBP8.95□□□□□ -0.98
PDLIM7-211ENST00000504318 VCYO14598 125 aa8.95□□□□□ -0.98
PDLIM7-211ENST00000504318 POLR2KP53803 58 aaKnown RBP8.95□□□□□ -0.98
PDLIM7-211ENST00000504318 H7C423 109 aa8.94□□□□□ -0.98
PDLIM7-211ENST00000504318 TSHBP01222 138 aa8.94□□□□□ -0.98
PDLIM7-211ENST00000504318 PET117Q6UWS5 81 aa8.94□□□□□ -0.98
PDLIM7-211ENST00000504318 KIR2DL4Q99706 377 aa8.94□□□□□ -0.98
PDLIM7-211ENST00000504318 A0A096LNJ9 63 aa8.93□□□□□ -0.98
PDLIM7-211ENST00000504318 TRBV27A0A0K0K1C4 114 aa8.93□□□□□ -0.98
PDLIM7-211ENST00000504318 SYS1-DBNDD2H3BUS1 97 aa8.93□□□□□ -0.98
PDLIM7-211ENST00000504318 UBE2L6O14933 153 aa8.93□□□□□ -0.98
PDLIM7-211ENST00000504318 ATP5LO75964 103 aa8.93□□□□□ -0.98
PDLIM7-211ENST00000504318 FGF6P10767 208 aa8.93□□□□□ -0.98
PDLIM7-211ENST00000504318 HNRNPA3P51991 378 aaKnown RBP8.93□□□□□ -0.98
PDLIM7-211ENST00000504318 I3L3M4 83 aa8.92□□□□□ -0.98
PDLIM7-211ENST00000504318 TEX43Q6ZNM6 134 aa8.92□□□□□ -0.98
PDLIM7-211ENST00000504318 hDV102S1A0JD36 115 aa8.91□□□□□ -0.98
PDLIM7-211ENST00000504318 GAGE12HA6NDE8 117 aa8.91□□□□□ -0.98
PDLIM7-211ENST00000504318 FOXI1Q12951 378 aa8.91□□□□□ -0.98
PDLIM7-211ENST00000504318 IFI27L1Q96BM0 104 aa8.91□□□□□ -0.98
PDLIM7-211ENST00000504318 TSTD3H0UI37 97 aa8.9□□□□□ -0.98
PDLIM7-211ENST00000504318 ZNF25P17030 456 aaPredicted RBP8.9□□□□□ -0.98
PDLIM7-211ENST00000504318 MRPL52Q86TS9 123 aaKnown RBP8.9□□□□□ -0.98
PDLIM7-211ENST00000504318 CHCHD10Q8WYQ3 142 aaPredicted RBP8.9□□□□□ -0.98
PDLIM7-211ENST00000504318 VAMP8Q9BV40 100 aa8.9□□□□□ -0.98
PDLIM7-211ENST00000504318 LINC00173Q6ZV60 143 aa8.89□□□□□ -0.99
PDLIM7-211ENST00000504318 OR5A1Q8NGJ0 315 aa8.89□□□□□ -0.99
PDLIM7-211ENST00000504318 SPACA4Q8TDM5 124 aa8.89□□□□□ -0.99
PDLIM7-211ENST00000504318 TOMM6Q96B49 74 aa8.89□□□□□ -0.99
PDLIM7-211ENST00000504318 GVQW2A0A096LPI5 108 aaPredicted RBP8.88□□□□□ -0.99
PDLIM7-211ENST00000504318 IGKV3OR2-268A0A0C4DH90 116 aa8.88□□□□□ -0.99
PDLIM7-211ENST00000504318 CHTF8P0CG12 524 aa8.88□□□□□ -0.99
PDLIM7-211ENST00000504318 LINC01545Q5VT33 79 aa8.88□□□□□ -0.99
PDLIM7-211ENST00000504318 AMMECR1LQ6DCA0 310 aa8.88□□□□□ -0.99
PDLIM7-211ENST00000504318 CDC42SE2Q9NRR3 84 aa8.88□□□□□ -0.99
PDLIM7-211ENST00000504318 CYSLTR1Q9Y271 337 aa8.88□□□□□ -0.99
PDLIM7-211ENST00000504318 LINC00959A0A1B0GUT2 108 aa8.87□□□□□ -0.99
PDLIM7-211ENST00000504318 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.87□□□□□ -0.99
PDLIM7-211ENST00000504318 SCGB3A1Q96QR1 104 aa8.87□□□□□ -0.99
PDLIM7-211ENST00000504318 IGHV3-64A0A075B6Q5 118 aa8.86□□□□□ -0.99
PDLIM7-211ENST00000504318 HSBP1L1C9JCN9 74 aa8.86□□□□□ -0.99
PDLIM7-211ENST00000504318 RPL37AP61513 92 aaKnown RBP8.86□□□□□ -0.99
PDLIM7-211ENST00000504318 HIGD2BQ4VC39 106 aa8.86□□□□□ -0.99
PDLIM7-211ENST00000504318 C2orf66Q6UXQ4 117 aa8.86□□□□□ -0.99
PDLIM7-211ENST00000504318 FAM104AQ969W3 186 aa8.86□□□□□ -0.99
PDLIM7-211ENST00000504318 A0A087WYN8 130 aa8.85□□□□□ -0.99
PDLIM7-211ENST00000504318 H0Y8G0 127 aa8.85□□□□□ -0.99
PDLIM7-211ENST00000504318 Q6ZN92 141 aa8.85□□□□□ -0.99
PDLIM7-211ENST00000504318 ERASQ7Z444 233 aa8.85□□□□□ -0.99
PDLIM7-211ENST00000504318 TMEM141Q96I45 108 aa8.85□□□□□ -0.99
PDLIM7-211ENST00000504318 PLAC8Q9NZF1 115 aa8.85□□□□□ -0.99
PDLIM7-211ENST00000504318 PCP4L1A6NKN8 68 aa8.84□□□□□ -0.99
PDLIM7-211ENST00000504318 J3QL48 77 aa8.84□□□□□ -0.99
PDLIM7-211ENST00000504318 CCL25O15444 150 aa8.84□□□□□ -0.99
PDLIM7-211ENST00000504318 ZNF664Q8N3J9 261 aa8.84□□□□□ -0.99
PDLIM7-211ENST00000504318 TIMM17AQ99595 171 aa8.84□□□□□ -0.99
PDLIM7-211ENST00000504318 UBE2D4Q9Y2X8 147 aa8.84□□□□□ -0.99
PDLIM7-211ENST00000504318 CSDC2Q9Y534 153 aaKnown RBP8.84□□□□□ -0.99
PDLIM7-211ENST00000504318 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.83□□□□□ -1
PDLIM7-211ENST00000504318 TRAV12-1A0A0B4J245 112 aa8.83□□□□□ -1
PDLIM7-211ENST00000504318 OXTP01178 125 aa8.83□□□□□ -1
PDLIM7-211ENST00000504318 COX6A2Q02221 97 aa8.83□□□□□ -1
PDLIM7-211ENST00000504318 CFAP161Q6P656 301 aa8.83□□□□□ -1
PDLIM7-211ENST00000504318 PAM16Q9Y3D7 125 aa8.83□□□□□ -1
PDLIM7-211ENST00000504318 NPSP0C0P6 89 aa8.82□□□□□ -1
PDLIM7-211ENST00000504318 XCL1P47992 114 aa8.82□□□□□ -1
PDLIM7-211ENST00000504318 SMAGPQ0VAQ4 97 aa8.82□□□□□ -1
PDLIM7-211ENST00000504318 SPATA45Q537H7 98 aa8.82□□□□□ -1
PDLIM7-211ENST00000504318 PAPPA-AS1Q5QFB9 102 aa8.82□□□□□ -1
PDLIM7-211ENST00000504318 MT1HL1P0DM35 61 aa8.81□□□□□ -1
PDLIM7-211ENST00000504318 PLNP26678 52 aa8.81□□□□□ -1
PDLIM7-211ENST00000504318 ODF1Q14990 250 aa8.81□□□□□ -1
PDLIM7-211ENST00000504318 CD164L2Q6UWJ8 174 aa8.81□□□□□ -1
PDLIM7-211ENST00000504318 ATOH7Q8N100 152 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms