RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 FXYD2P54710 66 aa15.19■□□□□ 0.02
PTPN13-205ENST00000502971 LELP1Q5T871 98 aa15.19■□□□□ 0.02
PTPN13-205ENST00000502971 C11orf45Q8TAV5 145 aa15.19■□□□□ 0.02
PTPN13-205ENST00000502971 IGLV5-39A0A0G2JS06 123 aa15.18■□□□□ 0.02
PTPN13-205ENST00000502971 PTTG1IPP53801 180 aa15.18■□□□□ 0.02
PTPN13-205ENST00000502971 COX11Q9Y6N1 276 aa15.18■□□□□ 0.02
PTPN13-205ENST00000502971 ZFAND6Q6FIF0 208 aa15.17■□□□□ 0.02
PTPN13-205ENST00000502971 SRSF9Q13242 221 aaKnown RBP eCLIP15.17■□□□□ 0.02
PTPN13-205ENST00000502971 SMIM1B2RUZ4 78 aa15.16■□□□□ 0.02
PTPN13-205ENST00000502971 NDUFA12Q9UI09 145 aa15.16■□□□□ 0.02
PTPN13-205ENST00000502971 IGKV3OR2-268A0A0C4DH90 116 aa15.15■□□□□ 0.02
PTPN13-205ENST00000502971 LINC00959A0A1B0GUT2 108 aa15.15■□□□□ 0.02
PTPN13-205ENST00000502971 C10orf126Q8N4M7 172 aa15.15■□□□□ 0.02
PTPN13-205ENST00000502971 MRAPQ8TCY5 172 aa15.15■□□□□ 0.02
PTPN13-205ENST00000502971 FBN3Q75N90 2809 aa15.15■□□□□ 0.02
PTPN13-205ENST00000502971 NANOS2P60321 138 aaKnown RBP15.14■□□□□ 0.01
PTPN13-205ENST00000502971 A0A0J9YXY3 114 aa15.14■□□□□ 0.01
PTPN13-205ENST00000502971 CCL25O15444 150 aa15.14■□□□□ 0.01
PTPN13-205ENST00000502971 SMIM13P0DJ93 91 aa15.14■□□□□ 0.01
PTPN13-205ENST00000502971 LYPD5Q6UWN5 251 aa15.14■□□□□ 0.01
PTPN13-205ENST00000502971 K7EP13 123 aa15.12■□□□□ 0.01
PTPN13-205ENST00000502971 SS18Q15532 418 aa15.12■□□□□ 0.01
PTPN13-205ENST00000502971 Q6ZVH6 145 aa15.12■□□□□ 0.01
PTPN13-205ENST00000502971 DEFB131BA0A096LNP1 70 aa15.12■□□□□ 0.01
PTPN13-205ENST00000502971 TMEM238C9JI98 176 aa15.12■□□□□ 0.01
PTPN13-205ENST00000502971 NDUFA1O15239 70 aa15.12■□□□□ 0.01
PTPN13-205ENST00000502971 IGHV3OR16-9A0A0B4J2B5 98 aa15.11■□□□□ 0.01
PTPN13-205ENST00000502971 TMEM238LA0A1B0GVL6 79 aa15.1■□□□□ 0.01
PTPN13-205ENST00000502971 A6NJY4 79 aa15.1■□□□□ 0.01
PTPN13-205ENST00000502971 NHP2Q9NX24 153 aaKnown RBP15.1■□□□□ 0.01
PTPN13-205ENST00000502971 IGHV3-30P01768 117 aa15.09■□□□□ 0.01
PTPN13-205ENST00000502971 IGHV3-30-5P0DP03 117 aa15.09■□□□□ 0.01
PTPN13-205ENST00000502971 B9D2Q9BPU9 175 aa15.09■□□□□ 0.01
PTPN13-205ENST00000502971 A0A087WZ39 114 aa15.08■□□□□ 0
PTPN13-205ENST00000502971 C9orf118A6NHY6 69 aa15.08■□□□□ 0
PTPN13-205ENST00000502971 ANGP03950 147 aaKnown RBP15.08■□□□□ 0
PTPN13-205ENST00000502971 LINC00269Q8N2A0 174 aa15.07■□□□□ 0
PTPN13-205ENST00000502971 A0A1B0GWB2 263 aa15.06■□□□□ 0
PTPN13-205ENST00000502971 TIMM17BO60830 172 aa15.06■□□□□ 0
PTPN13-205ENST00000502971 REG3AQ06141 175 aa15.06■□□□□ 0
PTPN13-205ENST00000502971 RAB37Q96AX2 223 aa15.06■□□□□ 0
PTPN13-205ENST00000502971 LITAFQ99732 161 aa15.06■□□□□ 0
PTPN13-205ENST00000502971 TRAV10A0A0B4J240 114 aa15.05■□□□□ -0
PTPN13-205ENST00000502971 CLPSL2Q6UWE3 100 aa15.05■□□□□ -0
PTPN13-205ENST00000502971 LINC01561Q8N1V8 128 aa15.05■□□□□ -0
PTPN13-205ENST00000502971 Q9H8V8 135 aa15.05■□□□□ -0
PTPN13-205ENST00000502971 Q8N3U1 123 aa15.04■□□□□ -0
PTPN13-205ENST00000502971 SPANXDQ9BXN6 97 aa15.04■□□□□ -0
PTPN13-205ENST00000502971 SPANXCQ9NY87 97 aa15.04■□□□□ -0
PTPN13-205ENST00000502971 K7ERJ3 54 aa15.03■□□□□ -0
PTPN13-205ENST00000502971 XCL1P47992 114 aa15.03■□□□□ -0
PTPN13-205ENST00000502971 COX7B2Q8TF08 81 aa15.03■□□□□ -0
PTPN13-205ENST00000502971 HERV-K104P63124 156 aa15.03■□□□□ -0
PTPN13-205ENST00000502971 C5orf38Q86SI9 138 aa15.03■□□□□ -0
PTPN13-205ENST00000502971 ZNF625Q96I27 306 aaPredicted RBP15.03■□□□□ -0
PTPN13-205ENST00000502971 CIRBPQ14011 172 aaKnown RBP15.02□□□□□ -0.01
PTPN13-205ENST00000502971 RPL24P83731 157 aaKnown RBP15.01□□□□□ -0.01
PTPN13-205ENST00000502971 VAMP3Q15836 100 aa15.01□□□□□ -0.01
PTPN13-205ENST00000502971 CD164L2Q6UWJ8 174 aa15.01□□□□□ -0.01
PTPN13-205ENST00000502971 NHLRC4P0CG21 123 aaPredicted RBP15□□□□□ -0.01
PTPN13-205ENST00000502971 MUSTN1Q8IVN3 82 aa15□□□□□ -0.01
PTPN13-205ENST00000502971 H3BUT2 72 aa15□□□□□ -0.01
PTPN13-205ENST00000502971 MIAQ16674 131 aa15□□□□□ -0.01
PTPN13-205ENST00000502971 CHCHD10Q8WYQ3 142 aaPredicted RBP15□□□□□ -0.01
PTPN13-205ENST00000502971 PRR34Q9NV39 138 aa15□□□□□ -0.01
PTPN13-205ENST00000502971 ESRGQ1W209 222 aa14.99□□□□□ -0.01
PTPN13-205ENST00000502971 ADAMTSL4-AS1Q5T5F5 129 aa14.99□□□□□ -0.01
PTPN13-205ENST00000502971 MEGF8Q7Z7M0 2845 aa14.99□□□□□ -0.01
PTPN13-205ENST00000502971 TENM3Q9P273 2699 aa14.99□□□□□ -0.01
PTPN13-205ENST00000502971 C15orf53Q8NAA6 179 aa14.98□□□□□ -0.01
PTPN13-205ENST00000502971 TOMM7Q9P0U1 55 aa14.97□□□□□ -0.01
PTPN13-205ENST00000502971 KLK12Q9UKR0 248 aa14.97□□□□□ -0.01
PTPN13-205ENST00000502971 IFITM1P13164 125 aa14.97□□□□□ -0.01
PTPN13-205ENST00000502971 SFTA2Q6UW10 78 aa14.97□□□□□ -0.01
PTPN13-205ENST00000502971 PRSS2P07478 247 aa14.96□□□□□ -0.01
PTPN13-205ENST00000502971 UBE2V1Q13404 147 aa14.96□□□□□ -0.01
PTPN13-205ENST00000502971 WFDC10BQ8IUB3 73 aa14.96□□□□□ -0.01
PTPN13-205ENST00000502971 A4D1N5 150 aa14.95□□□□□ -0.02
PTPN13-205ENST00000502971 IGLL5B9A064 214 aa14.95□□□□□ -0.02
PTPN13-205ENST00000502971 COX7A2LO14548 114 aa14.95□□□□□ -0.02
PTPN13-205ENST00000502971 IGHV3-33P01772 117 aa14.95□□□□□ -0.02
PTPN13-205ENST00000502971 A0A1W2PPM0 123 aa14.95□□□□□ -0.02
PTPN13-205ENST00000502971 CFC1BP0CG36 223 aa14.95□□□□□ -0.02
PTPN13-205ENST00000502971 CFC1P0CG37 223 aa14.95□□□□□ -0.02
PTPN13-205ENST00000502971 MEIG1Q5JSS6 88 aa14.95□□□□□ -0.02
PTPN13-205ENST00000502971 IGLV10-54A0A075B6I4 117 aa14.94□□□□□ -0.02
PTPN13-205ENST00000502971 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.94□□□□□ -0.02
PTPN13-205ENST00000502971 APOMO95445 188 aa14.94□□□□□ -0.02
PTPN13-205ENST00000502971 NAA38Q9BRA0 125 aaKnown RBP14.94□□□□□ -0.02
PTPN13-205ENST00000502971 ENHOQ6UWT2 76 aa14.93□□□□□ -0.02
PTPN13-205ENST00000502971 Q8IZM0 81 aa14.93□□□□□ -0.02
PTPN13-205ENST00000502971 CRPP02741 224 aa14.92□□□□□ -0.02
PTPN13-205ENST00000502971 FOXI1Q12951 378 aa14.92□□□□□ -0.02
PTPN13-205ENST00000502971 COPS9Q8WXC6 57 aa14.92□□□□□ -0.02
PTPN13-205ENST00000502971 HUWE1Q7Z6Z7 4374 aaKnown RBP14.92□□□□□ -0.02
PTPN13-205ENST00000502971 TRAV8-4A0A0B4J246 113 aa14.92□□□□□ -0.02
PTPN13-205ENST00000502971 FABP2P12104 132 aa14.92□□□□□ -0.02
PTPN13-205ENST00000502971 C6orf226Q5I0X4 101 aa14.92□□□□□ -0.02
PTPN13-205ENST00000502971 A0A0B4J2C4 111 aa14.91□□□□□ -0.02
PTPN13-205ENST00000502971 MALP21145 153 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms