RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 PPP1R17O96001 155 aa7.19□□□□□ -1.26
VTI1A-208ENST00000494728 CKS2P33552 79 aa7.19□□□□□ -1.26
VTI1A-208ENST00000494728 IFITM2Q01629 132 aa7.19□□□□□ -1.26
VTI1A-208ENST00000494728 CAMK2N2Q96S95 79 aa7.19□□□□□ -1.26
VTI1A-208ENST00000494728 LPAP08519 4548 aa7.18□□□□□ -1.26
VTI1A-208ENST00000494728 LINC00862A6NCI5 91 aa7.18□□□□□ -1.26
VTI1A-208ENST00000494728 APOMO95445 188 aa7.18□□□□□ -1.26
VTI1A-208ENST00000494728 HBBP68871 147 aa7.18□□□□□ -1.26
VTI1A-208ENST00000494728 SPAG11BQ08648 103 aa7.18□□□□□ -1.26
VTI1A-208ENST00000494728 SRSF9Q13242 221 aaKnown RBP eCLIP7.18□□□□□ -1.26
VTI1A-208ENST00000494728 CLLU1Q5K131 121 aa7.18□□□□□ -1.26
VTI1A-208ENST00000494728 IGHV3OR16-9A0A0B4J2B5 98 aa7.17□□□□□ -1.26
VTI1A-208ENST00000494728 RPL18AQ02543 176 aaKnown RBP7.17□□□□□ -1.26
VTI1A-208ENST00000494728 C10orf25Q5T742 122 aa7.17□□□□□ -1.26
VTI1A-208ENST00000494728 C2orf48Q96LS8 159 aa7.17□□□□□ -1.26
VTI1A-208ENST00000494728 A0A1B0GW15 77 aa7.16□□□□□ -1.26
VTI1A-208ENST00000494728 KRTAP10-8P60410 259 aa7.16□□□□□ -1.26
VTI1A-208ENST00000494728 C9orf116Q5BN46 136 aaPredicted RBP7.16□□□□□ -1.26
VTI1A-208ENST00000494728 XP32Q5T750 250 aa7.16□□□□□ -1.26
VTI1A-208ENST00000494728 SPINK6Q6UWN8 80 aa7.16□□□□□ -1.26
VTI1A-208ENST00000494728 Q6ZRP5 223 aa7.16□□□□□ -1.26
VTI1A-208ENST00000494728 PHF5AQ7RTV0 110 aaKnown RBP7.16□□□□□ -1.26
VTI1A-208ENST00000494728 KRTAP11-1Q8IUC1 163 aa7.16□□□□□ -1.26
VTI1A-208ENST00000494728 ORAOV1Q8WV07 137 aa7.16□□□□□ -1.26
VTI1A-208ENST00000494728 PKIGQ9Y2B9 76 aa7.16□□□□□ -1.26
VTI1A-208ENST00000494728 FAM168BA1KXE4 195 aa7.15□□□□□ -1.26
VTI1A-208ENST00000494728 IFITM10A6NMD0 228 aa7.15□□□□□ -1.26
VTI1A-208ENST00000494728 MRPS36P82909 103 aaKnown RBP7.15□□□□□ -1.26
VTI1A-208ENST00000494728 SMAGPQ0VAQ4 97 aa7.15□□□□□ -1.26
VTI1A-208ENST00000494728 OR10D4PQ8NGN7 298 aa7.15□□□□□ -1.26
VTI1A-208ENST00000494728 SPANXA1Q9NS26 97 aa7.15□□□□□ -1.26
VTI1A-208ENST00000494728 PSORS1C2Q9UIG4 136 aa7.15□□□□□ -1.26
VTI1A-208ENST00000494728 TMEM18Q96B42 140 aa7.14□□□□□ -1.27
VTI1A-208ENST00000494728 C6orf48Q9UBA6 75 aa7.14□□□□□ -1.27
VTI1A-208ENST00000494728 IGLV4-3A0A075B6K6 122 aa7.13□□□□□ -1.27
VTI1A-208ENST00000494728 F8W036 122 aa7.13□□□□□ -1.27
VTI1A-208ENST00000494728 KIAA0087Q14695 138 aa7.13□□□□□ -1.27
VTI1A-208ENST00000494728 C4orf48Q5BLP8 95 aa7.13□□□□□ -1.27
VTI1A-208ENST00000494728 ZC2HC1BQ5TFG8 222 aa7.13□□□□□ -1.27
VTI1A-208ENST00000494728 UNQ6190/PRO20217Q6UXQ8 127 aa7.13□□□□□ -1.27
VTI1A-208ENST00000494728 KRTAP7-1Q8IUC3 87 aa7.13□□□□□ -1.27
VTI1A-208ENST00000494728 ORMDL3Q8N138 153 aa7.13□□□□□ -1.27
VTI1A-208ENST00000494728 PRELID3AQ96N28 172 aa7.13□□□□□ -1.27
VTI1A-208ENST00000494728 MRPL35Q9NZE8 188 aaKnown RBP7.13□□□□□ -1.27
VTI1A-208ENST00000494728 PPBPP02775 128 aa7.12□□□□□ -1.27
VTI1A-208ENST00000494728 S100A8P05109 93 aa7.12□□□□□ -1.27
VTI1A-208ENST00000494728 TMEM136Q6ZRR5 245 aa7.12□□□□□ -1.27
VTI1A-208ENST00000494728 LINC00173Q6ZV60 143 aa7.12□□□□□ -1.27
VTI1A-208ENST00000494728 ATP5L2Q7Z4Y8 100 aa7.12□□□□□ -1.27
VTI1A-208ENST00000494728 COMMD7Q86VX2 200 aa7.12□□□□□ -1.27
VTI1A-208ENST00000494728 PNRC1Q12796 327 aaPredicted RBP7.11□□□□□ -1.27
VTI1A-208ENST00000494728 RNF151Q2KHN1 245 aa7.11□□□□□ -1.27
VTI1A-208ENST00000494728 LINC00242Q5T6M2 205 aa7.11□□□□□ -1.27
VTI1A-208ENST00000494728 REG3GQ6UW15 175 aa7.11□□□□□ -1.27
VTI1A-208ENST00000494728 A0A087WZ39 114 aa7.1□□□□□ -1.27
VTI1A-208ENST00000494728 LOC389332A0A1B0GUA5 103 aa7.1□□□□□ -1.27
VTI1A-208ENST00000494728 NDUFA1O15239 70 aa7.1□□□□□ -1.27
VTI1A-208ENST00000494728 ADCYAP1P18509 176 aa7.1□□□□□ -1.27
VTI1A-208ENST00000494728 C1orf137Q5JT78 98 aa7.1□□□□□ -1.27
VTI1A-208ENST00000494728 UQCC3Q6UW78 93 aa7.1□□□□□ -1.27
VTI1A-208ENST00000494728 C2orf82Q6UX34 121 aa7.1□□□□□ -1.27
VTI1A-208ENST00000494728 PYGO1Q9Y3Y4 419 aa7.1□□□□□ -1.27
VTI1A-208ENST00000494728 MT-ND4LP03901 98 aa7.09□□□□□ -1.27
VTI1A-208ENST00000494728 MT-ND6P03923 174 aa7.09□□□□□ -1.27
VTI1A-208ENST00000494728 TLX1NBP0CAT3 122 aa7.09□□□□□ -1.27
VTI1A-208ENST00000494728 IFI27P40305 119 aaPredicted RBP7.09□□□□□ -1.27
VTI1A-208ENST00000494728 FAM19A5Q7Z5A7 132 aaPredicted RBP7.09□□□□□ -1.27
VTI1A-208ENST00000494728 TGIF2-C20orf24A0A0A6YYL0 155 aa7.08□□□□□ -1.28
VTI1A-208ENST00000494728 TMEM218A2RU14 115 aa7.08□□□□□ -1.28
VTI1A-208ENST00000494728 PRSS47A8MTI9 375 aa7.08□□□□□ -1.28
VTI1A-208ENST00000494728 RAB5AP20339 215 aa7.08□□□□□ -1.28
VTI1A-208ENST00000494728 UBE2D1P51668 147 aa7.08□□□□□ -1.28
VTI1A-208ENST00000494728 GAGE2EQ4V326 116 aa7.08□□□□□ -1.28
VTI1A-208ENST00000494728 ANAPC16Q96DE5 110 aa7.08□□□□□ -1.28
VTI1A-208ENST00000494728 TMEM141Q96I45 108 aa7.08□□□□□ -1.28
VTI1A-208ENST00000494728 GAGE2DQ9UEU5 116 aa7.08□□□□□ -1.28
VTI1A-208ENST00000494728 C9orf129Q5T035 196 aaKnown RBP7.07□□□□□ -1.28
VTI1A-208ENST00000494728 C2orf66Q6UXQ4 117 aa7.07□□□□□ -1.28
VTI1A-208ENST00000494728 Q8N8P6 123 aa7.07□□□□□ -1.28
VTI1A-208ENST00000494728 IMMP2LQ96T52 175 aa7.07□□□□□ -1.28
VTI1A-208ENST00000494728 F8WDY8 70 aa7.06□□□□□ -1.28
VTI1A-208ENST00000494728 IGLV7-43P04211 117 aa7.06□□□□□ -1.28
VTI1A-208ENST00000494728 AMELXQ99217 191 aa7.06□□□□□ -1.28
VTI1A-208ENST00000494728 MAP1LC3AQ9H492 121 aa7.06□□□□□ -1.28
VTI1A-208ENST00000494728 IGIPA6NJ69 53 aa7.05□□□□□ -1.28
VTI1A-208ENST00000494728 M0QXV9 152 aa7.05□□□□□ -1.28
VTI1A-208ENST00000494728 TEX43Q6ZNM6 134 aa7.05□□□□□ -1.28
VTI1A-208ENST00000494728 SEC11CQ9BY50 192 aa7.05□□□□□ -1.28
VTI1A-208ENST00000494728 CYSLTR1Q9Y271 337 aa7.05□□□□□ -1.28
VTI1A-208ENST00000494728 LAMTOR2Q9Y2Q5 125 aa7.05□□□□□ -1.28
VTI1A-208ENST00000494728 TRBV30A0A0K0K1B3 111 aa7.04□□□□□ -1.28
VTI1A-208ENST00000494728 PRR26Q8N8Z3 221 aa7.04□□□□□ -1.28
VTI1A-208ENST00000494728 NDUFC2-KCTD14E9PQ53 114 aa7.03□□□□□ -1.28
VTI1A-208ENST00000494728 H0Y9J4 135 aa7.03□□□□□ -1.28
VTI1A-208ENST00000494728 KRTAP1-4P0C5Y4 121 aa7.03□□□□□ -1.28
VTI1A-208ENST00000494728 FAM19A3Q7Z5A8 133 aa7.03□□□□□ -1.28
VTI1A-208ENST00000494728 KIAA1644Q3SXP7 199 aa7.02□□□□□ -1.29
VTI1A-208ENST00000494728 LINC00469Q8N7U9 141 aa7.02□□□□□ -1.29
VTI1A-208ENST00000494728 C2orf88Q9BSF0 95 aa7.02□□□□□ -1.29
VTI1A-208ENST00000494728 TOMM7Q9P0U1 55 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms