RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 APOC3P02656 99 aa5.65□□□□□ -1.5
ITGB1-217ENST00000494395 XCL1P47992 114 aa5.65□□□□□ -1.5
ITGB1-217ENST00000494395 COX19Q49B96 90 aa5.65□□□□□ -1.5
ITGB1-217ENST00000494395 SVBPQ8N300 66 aa5.65□□□□□ -1.5
ITGB1-217ENST00000494395 PYGO1Q9Y3Y4 419 aa5.65□□□□□ -1.5
ITGB1-217ENST00000494395 GVQW2A0A096LPI5 108 aaPredicted RBP5.64□□□□□ -1.51
ITGB1-217ENST00000494395 C1orf196B1AJZ1 125 aa5.64□□□□□ -1.51
ITGB1-217ENST00000494395 K7EMI3 77 aa5.64□□□□□ -1.51
ITGB1-217ENST00000494395 SNAPINO95295 136 aa5.64□□□□□ -1.51
ITGB1-217ENST00000494395 RAB5AP20339 215 aa5.64□□□□□ -1.51
ITGB1-217ENST00000494395 SS18Q15532 418 aa5.64□□□□□ -1.51
ITGB1-217ENST00000494395 CD164L2Q6UWJ8 174 aa5.64□□□□□ -1.51
ITGB1-217ENST00000494395 YPEL4Q96NS1 127 aa5.64□□□□□ -1.51
ITGB1-217ENST00000494395 OPRPNQ99935 248 aaPredicted RBP5.64□□□□□ -1.51
ITGB1-217ENST00000494395 ALKBH7Q9BT30 221 aaPredicted RBP5.64□□□□□ -1.51
ITGB1-217ENST00000494395 NXT2Q9NPJ8 142 aaKnown RBP5.64□□□□□ -1.51
ITGB1-217ENST00000494395 VPS13BQ7Z7G8 4022 aa5.64□□□□□ -1.51
ITGB1-217ENST00000494395 PCLOQ9Y6V0 5065 aa5.63□□□□□ -1.51
ITGB1-217ENST00000494395 IGLV4-3A0A075B6K6 122 aa5.63□□□□□ -1.51
ITGB1-217ENST00000494395 TGIF2-C20orf24A0A0A6YYL0 155 aa5.63□□□□□ -1.51
ITGB1-217ENST00000494395 TRAV13-1A0A0B4J241 112 aa5.63□□□□□ -1.51
ITGB1-217ENST00000494395 hDV102S1A0JD36 115 aa5.63□□□□□ -1.51
ITGB1-217ENST00000494395 LINC01546A6NGU7 62 aa5.63□□□□□ -1.51
ITGB1-217ENST00000494395 MT-ND6P03923 174 aa5.63□□□□□ -1.51
ITGB1-217ENST00000494395 IFI27P40305 119 aaPredicted RBP5.63□□□□□ -1.51
ITGB1-217ENST00000494395 CIRBPQ14011 172 aaKnown RBP5.63□□□□□ -1.51
ITGB1-217ENST00000494395 NDUFA5Q16718 116 aa5.63□□□□□ -1.51
ITGB1-217ENST00000494395 CFAP161Q6P656 301 aa5.63□□□□□ -1.51
ITGB1-217ENST00000494395 SDIM1Q6ZPB5 146 aa5.63□□□□□ -1.51
ITGB1-217ENST00000494395 IGHV1-58A0A0C4DH39 117 aa5.62□□□□□ -1.51
ITGB1-217ENST00000494395 IGIPA6NJ69 53 aa5.62□□□□□ -1.51
ITGB1-217ENST00000494395 HIGD2BQ4VC39 106 aa5.62□□□□□ -1.51
ITGB1-217ENST00000494395 ORMDL2Q53FV1 153 aa5.62□□□□□ -1.51
ITGB1-217ENST00000494395 C2orf66Q6UXQ4 117 aa5.62□□□□□ -1.51
ITGB1-217ENST00000494395 LINC00173Q6ZV60 143 aa5.62□□□□□ -1.51
ITGB1-217ENST00000494395 SCXQ7RTU7 201 aa5.62□□□□□ -1.51
ITGB1-217ENST00000494395 CHAC1Q9BUX1 264 aa5.62□□□□□ -1.51
ITGB1-217ENST00000494395 CYSLTR1Q9Y271 337 aa5.62□□□□□ -1.51
ITGB1-217ENST00000494395 IGHV3OR16-9A0A0B4J2B5 98 aa5.61□□□□□ -1.51
ITGB1-217ENST00000494395 PANO1I0J062 215 aa5.61□□□□□ -1.51
ITGB1-217ENST00000494395 SMR3BP02814 79 aaPredicted RBP5.61□□□□□ -1.51
ITGB1-217ENST00000494395 SLC7A5P1Q8MH63 180 aa5.61□□□□□ -1.51
ITGB1-217ENST00000494395 TMEM141Q96I45 108 aa5.61□□□□□ -1.51
ITGB1-217ENST00000494395 AMELXQ99217 191 aa5.61□□□□□ -1.51
ITGB1-217ENST00000494395 FAT1Q14517 4588 aa5.6□□□□□ -1.51
ITGB1-217ENST00000494395 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.6□□□□□ -1.51
ITGB1-217ENST00000494395 IFITM10A6NMD0 228 aa5.6□□□□□ -1.51
ITGB1-217ENST00000494395 COX7A2LO14548 114 aa5.6□□□□□ -1.51
ITGB1-217ENST00000494395 FABP9Q0Z7S8 132 aa5.6□□□□□ -1.51
ITGB1-217ENST00000494395 Q5VSD8 79 aa5.6□□□□□ -1.51
ITGB1-217ENST00000494395 CIRBP-AS1Q8TBR5 109 aa5.6□□□□□ -1.51
ITGB1-217ENST00000494395 TOMM6Q96B49 74 aa5.6□□□□□ -1.51
ITGB1-217ENST00000494395 ABCA13Q86UQ4 5058 aa5.59□□□□□ -1.51
ITGB1-217ENST00000494395 IGHV3-64A0A075B6Q5 118 aa5.59□□□□□ -1.51
ITGB1-217ENST00000494395 EPM2AB3EWF7 344 aa5.59□□□□□ -1.51
ITGB1-217ENST00000494395 UBE2D1P51668 147 aa5.59□□□□□ -1.51
ITGB1-217ENST00000494395 LINC00242Q5T6M2 205 aa5.59□□□□□ -1.51
ITGB1-217ENST00000494395 ZC2HC1BQ5TFG8 222 aa5.59□□□□□ -1.51
ITGB1-217ENST00000494395 FAM19A3Q7Z5A8 133 aa5.59□□□□□ -1.51
ITGB1-217ENST00000494395 C5orf38Q86SI9 138 aa5.59□□□□□ -1.51
ITGB1-217ENST00000494395 C18orf32Q8TCD1 76 aa5.59□□□□□ -1.51
ITGB1-217ENST00000494395 LINC00526Q96FQ7 95 aa5.59□□□□□ -1.51
ITGB1-217ENST00000494395 URB1-AS1Q96HZ7 61 aa5.59□□□□□ -1.51
ITGB1-217ENST00000494395 TIMM17AQ99595 171 aa5.59□□□□□ -1.51
ITGB1-217ENST00000494395 TRAPPC1Q9Y5R8 145 aa5.59□□□□□ -1.51
ITGB1-217ENST00000494395 IGLV4-69A0A075B6H9 119 aa5.58□□□□□ -1.52
ITGB1-217ENST00000494395 A0A096LNJ9 63 aa5.58□□□□□ -1.52
ITGB1-217ENST00000494395 KRTAP10-4P60372 401 aaPredicted RBP5.58□□□□□ -1.52
ITGB1-217ENST00000494395 COX6A2Q02221 97 aa5.58□□□□□ -1.52
ITGB1-217ENST00000494395 TEX43Q6ZNM6 134 aa5.58□□□□□ -1.52
ITGB1-217ENST00000494395 CBLN2Q8IUK8 224 aa5.58□□□□□ -1.52
ITGB1-217ENST00000494395 PRSS3P2Q8NHM4 247 aa5.58□□□□□ -1.52
ITGB1-217ENST00000494395 KRTAP9-9Q9BYP9 154 aa5.58□□□□□ -1.52
ITGB1-217ENST00000494395 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
ITGB1-217ENST00000494395 A0A087WZ39 114 aa5.57□□□□□ -1.52
ITGB1-217ENST00000494395 CHTF8P0CG12 524 aa5.57□□□□□ -1.52
ITGB1-217ENST00000494395 G0S2P27469 103 aa5.57□□□□□ -1.52
ITGB1-217ENST00000494395 ERASQ7Z444 233 aa5.57□□□□□ -1.52
ITGB1-217ENST00000494395 OR10D4PQ8NGN7 298 aa5.57□□□□□ -1.52
ITGB1-217ENST00000494395 SPACA4Q8TDM5 124 aa5.57□□□□□ -1.52
ITGB1-217ENST00000494395 CARD19Q96LW7 228 aa5.57□□□□□ -1.52
ITGB1-217ENST00000494395 GAGE10A6NGK3 116 aa5.56□□□□□ -1.52
ITGB1-217ENST00000494395 LINC01549A6NIU2 74 aa5.56□□□□□ -1.52
ITGB1-217ENST00000494395 SYCNQ0VAF6 134 aa5.56□□□□□ -1.52
ITGB1-217ENST00000494395 Q6ZN92 141 aa5.56□□□□□ -1.52
ITGB1-217ENST00000494395 Q6ZRU5 148 aa5.56□□□□□ -1.52
ITGB1-217ENST00000494395 FA2HQ7L5A8 372 aa5.56□□□□□ -1.52
ITGB1-217ENST00000494395 C2orf48Q96LS8 159 aa5.56□□□□□ -1.52
ITGB1-217ENST00000494395 VCX2Q9H322 139 aa5.56□□□□□ -1.52
ITGB1-217ENST00000494395 SMCO4Q9NRQ5 59 aa5.56□□□□□ -1.52
ITGB1-217ENST00000494395 A0A096LNI7 61 aa5.55□□□□□ -1.52
ITGB1-217ENST00000494395 APOMO95445 188 aa5.55□□□□□ -1.52
ITGB1-217ENST00000494395 SPAG11BQ08648 103 aa5.55□□□□□ -1.52
ITGB1-217ENST00000494395 KIAA0087Q14695 138 aa5.55□□□□□ -1.52
ITGB1-217ENST00000494395 PAPPA-AS1Q5QFB9 102 aa5.55□□□□□ -1.52
ITGB1-217ENST00000494395 LINC01561Q8N1V8 128 aa5.55□□□□□ -1.52
ITGB1-217ENST00000494395 ORAOV1Q8WV07 137 aa5.55□□□□□ -1.52
ITGB1-217ENST00000494395 SCGB3A1Q96QR1 104 aa5.55□□□□□ -1.52
ITGB1-217ENST00000494395 C2orf88Q9BSF0 95 aa5.55□□□□□ -1.52
ITGB1-217ENST00000494395 A0A087WYN8 130 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms