RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 DEFB136Q30KP8 78 aa8.26□□□□□ -1.09
RFC4-214ENST00000494047 DEFB121Q5J5C9 76 aa8.26□□□□□ -1.09
RFC4-214ENST00000494047 TMEM243Q9BU79 118 aa8.26□□□□□ -1.09
RFC4-214ENST00000494047 C16orf95Q9H693 158 aa8.26□□□□□ -1.09
RFC4-214ENST00000494047 TRAV13-2A0A0B4J235 113 aa8.25□□□□□ -1.09
RFC4-214ENST00000494047 CCL24O00175 119 aa8.25□□□□□ -1.09
RFC4-214ENST00000494047 TRACP01848 142 aa8.25□□□□□ -1.09
RFC4-214ENST00000494047 Q6ZSV7 163 aa8.25□□□□□ -1.09
RFC4-214ENST00000494047 C3orf56Q8N813 242 aa8.25□□□□□ -1.09
RFC4-214ENST00000494047 CDKN2A-AS1Q9UH64 79 aa8.25□□□□□ -1.09
RFC4-214ENST00000494047 ADARB2-AS1A8MUL3 147 aa8.24□□□□□ -1.09
RFC4-214ENST00000494047 H7C2G1 150 aa8.24□□□□□ -1.09
RFC4-214ENST00000494047 COX7A2LO14548 114 aa8.24□□□□□ -1.09
RFC4-214ENST00000494047 LINC00242Q5T6M2 205 aa8.24□□□□□ -1.09
RFC4-214ENST00000494047 LINC00308Q8TCZ7 52 aa8.24□□□□□ -1.09
RFC4-214ENST00000494047 NTN5Q8WTR8 489 aaPredicted RBP8.24□□□□□ -1.09
RFC4-214ENST00000494047 IGHV3OR16-12A0A075B7B8 117 aa8.23□□□□□ -1.09
RFC4-214ENST00000494047 SMIM1B2RUZ4 78 aa8.23□□□□□ -1.09
RFC4-214ENST00000494047 XGP55808 180 aa8.23□□□□□ -1.09
RFC4-214ENST00000494047 GAGE2BQ13066 116 aa8.23□□□□□ -1.09
RFC4-214ENST00000494047 GAGE2EQ4V326 116 aa8.23□□□□□ -1.09
RFC4-214ENST00000494047 MEIG1Q5JSS6 88 aa8.23□□□□□ -1.09
RFC4-214ENST00000494047 Q9H8V8 135 aa8.23□□□□□ -1.09
RFC4-214ENST00000494047 CDC42SE2Q9NRR3 84 aa8.23□□□□□ -1.09
RFC4-214ENST00000494047 GAGE2DQ9UEU5 116 aa8.23□□□□□ -1.09
RFC4-214ENST00000494047 ANK2Q01484 3957 aa8.23□□□□□ -1.09
RFC4-214ENST00000494047 PROK1P58294 105 aa8.22□□□□□ -1.09
RFC4-214ENST00000494047 Q6ZSN1 163 aa8.22□□□□□ -1.09
RFC4-214ENST00000494047 C1orf158Q8N1D5 194 aa8.22□□□□□ -1.09
RFC4-214ENST00000494047 IMUPQ9GZP8 106 aa8.22□□□□□ -1.09
RFC4-214ENST00000494047 XCL2Q9UBD3 114 aa8.22□□□□□ -1.09
RFC4-214ENST00000494047 EIF4EBP3O60516 100 aaPredicted RBP8.22□□□□□ -1.09
RFC4-214ENST00000494047 NDUFA7O95182 113 aa8.22□□□□□ -1.09
RFC4-214ENST00000494047 INAFM2P0DMQ5 153 aa8.22□□□□□ -1.09
RFC4-214ENST00000494047 ADAMTSL4-AS1Q5T5F5 129 aa8.22□□□□□ -1.09
RFC4-214ENST00000494047 CEMP1Q6PRD7 247 aaPredicted RBP8.22□□□□□ -1.09
RFC4-214ENST00000494047 SHISA2Q6UWI4 295 aa8.22□□□□□ -1.09
RFC4-214ENST00000494047 LINC01561Q8N1V8 128 aa8.22□□□□□ -1.09
RFC4-214ENST00000494047 DEFB104AQ8WTQ1 72 aa8.22□□□□□ -1.09
RFC4-214ENST00000494047 ZNF625Q96I27 306 aaPredicted RBP8.22□□□□□ -1.09
RFC4-214ENST00000494047 CITED1Q99966 193 aa8.22□□□□□ -1.09
RFC4-214ENST00000494047 MT-ATP8P03928 68 aa8.21□□□□□ -1.1
RFC4-214ENST00000494047 TRGV2A0A075B6R0 118 aa8.2□□□□□ -1.1
RFC4-214ENST00000494047 IGHV3-38A0A0C4DH36 116 aa8.2□□□□□ -1.1
RFC4-214ENST00000494047 CRPP02741 224 aa8.2□□□□□ -1.1
RFC4-214ENST00000494047 C18orf65Q6ZTR6 163 aa8.2□□□□□ -1.1
RFC4-214ENST00000494047 C11orf44Q8N8P7 122 aa8.2□□□□□ -1.1
RFC4-214ENST00000494047 ANAPC13Q9BS18 74 aa8.2□□□□□ -1.1
RFC4-214ENST00000494047 IGLV1-51P01701 117 aa8.19□□□□□ -1.1
RFC4-214ENST00000494047 RNASE13Q5GAN3 156 aaKnown RBP8.19□□□□□ -1.1
RFC4-214ENST00000494047 TTC32Q5I0X7 151 aa8.19□□□□□ -1.1
RFC4-214ENST00000494047 HIST2H2BDQ6DRA6 164 aa8.19□□□□□ -1.1
RFC4-214ENST00000494047 IBA57-AS1B1ANH7 110 aa8.18□□□□□ -1.1
RFC4-214ENST00000494047 F5H768 121 aa8.18□□□□□ -1.1
RFC4-214ENST00000494047 H0YGX0 51 aa8.18□□□□□ -1.1
RFC4-214ENST00000494047 ATP5G1P05496 136 aa8.18□□□□□ -1.1
RFC4-214ENST00000494047 TENM1Q9UKZ4 2725 aa8.17□□□□□ -1.1
RFC4-214ENST00000494047 TRGV4A0A0C4DH28 118 aa8.17□□□□□ -1.1
RFC4-214ENST00000494047 SMIM9A6NGZ8 99 aa8.17□□□□□ -1.1
RFC4-214ENST00000494047 RPL28P46779 137 aaKnown RBP8.17□□□□□ -1.1
RFC4-214ENST00000494047 Q6ZTI0 123 aa8.17□□□□□ -1.1
RFC4-214ENST00000494047 KIR2DL5BQ8NHK3 375 aa8.17□□□□□ -1.1
RFC4-214ENST00000494047 MUC7Q8TAX7 377 aa8.17□□□□□ -1.1
RFC4-214ENST00000494047 COX7B2Q8TF08 81 aa8.17□□□□□ -1.1
RFC4-214ENST00000494047 TRAV13-1A0A0B4J241 112 aa8.16□□□□□ -1.1
RFC4-214ENST00000494047 TEX49A0A1B0GTD5 131 aa8.16□□□□□ -1.1
RFC4-214ENST00000494047 GAGE12JA6NER3 117 aa8.16□□□□□ -1.1
RFC4-214ENST00000494047 GAGE4Q13068 117 aa8.16□□□□□ -1.1
RFC4-214ENST00000494047 GAGE5Q13069 117 aa8.16□□□□□ -1.1
RFC4-214ENST00000494047 DAND5Q8N907 189 aa8.16□□□□□ -1.1
RFC4-214ENST00000494047 NOP10Q9NPE3 64 aaKnown RBP8.16□□□□□ -1.1
RFC4-214ENST00000494047 TRBV6-8A0A0A6YYG3 113 aa8.15□□□□□ -1.1
RFC4-214ENST00000494047 TRBV7-7A0A0K0K1E9 115 aa8.15□□□□□ -1.1
RFC4-214ENST00000494047 A0A1W2PRX2 142 aa8.15□□□□□ -1.1
RFC4-214ENST00000494047 NTM-AS1Q6ZSK4 140 aa8.15□□□□□ -1.1
RFC4-214ENST00000494047 LINC01006Q8NI28 216 aa8.15□□□□□ -1.1
RFC4-214ENST00000494047 CITED2Q99967 270 aaPredicted RBP8.15□□□□□ -1.1
RFC4-214ENST00000494047 A0A087WZ39 114 aa8.14□□□□□ -1.11
RFC4-214ENST00000494047 A0A1B0GX51 115 aa8.14□□□□□ -1.11
RFC4-214ENST00000494047 DNAL4O96015 105 aa8.14□□□□□ -1.11
RFC4-214ENST00000494047 LINC00694P0DN24 101 aa8.14□□□□□ -1.11
RFC4-214ENST00000494047 CXCL5P42830 114 aa8.14□□□□□ -1.11
RFC4-214ENST00000494047 COX6A2Q02221 97 aa8.14□□□□□ -1.11
RFC4-214ENST00000494047 C15orf53Q8NAA6 179 aa8.14□□□□□ -1.11
RFC4-214ENST00000494047 A0A1B0GUV1 79 aa8.13□□□□□ -1.11
RFC4-214ENST00000494047 NDUFV3P56181 108 aaKnown RBP8.13□□□□□ -1.11
RFC4-214ENST00000494047 GAGE6Q13070 117 aa8.13□□□□□ -1.11
RFC4-214ENST00000494047 SORL1Q92673 2214 aa8.13□□□□□ -1.11
RFC4-214ENST00000494047 PLAC8L1A1L4L8 177 aa8.12□□□□□ -1.11
RFC4-214ENST00000494047 LINC00643Q86TS7 51 aa8.12□□□□□ -1.11
RFC4-214ENST00000494047 LINC00612Q8N6U2 182 aa8.12□□□□□ -1.11
RFC4-214ENST00000494047 CSNK1G2-AS1Q8NCQ2 148 aa8.12□□□□□ -1.11
RFC4-214ENST00000494047 CLEC2BQ92478 149 aa8.12□□□□□ -1.11
RFC4-214ENST00000494047 MGAM2Q2M2H8 2515 aa8.11□□□□□ -1.11
RFC4-214ENST00000494047 NPC2P61916 151 aa8.11□□□□□ -1.11
RFC4-214ENST00000494047 SS18Q15532 418 aa8.11□□□□□ -1.11
RFC4-214ENST00000494047 Q9UF83 564 aa8.11□□□□□ -1.11
RFC4-214ENST00000494047 NBEAL1Q6ZS30 2694 aa8.11□□□□□ -1.11
RFC4-214ENST00000494047 IGHV3OR16-9A0A0B4J2B5 98 aa8.1□□□□□ -1.11
RFC4-214ENST00000494047 LYRM9A8MSI8 78 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 230.7 ms