RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 IGHV3-30-5P0DP03 117 aa8.21□□□□□ -1.1
UPF3A-210ENST00000493727 ZNF25P17030 456 aaPredicted RBP8.21□□□□□ -1.1
UPF3A-210ENST00000493727 MPV17L2Q567V2 206 aa8.21□□□□□ -1.1
UPF3A-210ENST00000493727 SPANXA1Q9NS26 97 aa8.21□□□□□ -1.1
UPF3A-210ENST00000493727 UBE2D4Q9Y2X8 147 aa8.21□□□□□ -1.1
UPF3A-210ENST00000493727 VPS13BQ7Z7G8 4022 aa8.2□□□□□ -1.1
UPF3A-210ENST00000493727 TRIAP1O43715 76 aa8.2□□□□□ -1.1
UPF3A-210ENST00000493727 LEPROTL1O95214 131 aa8.2□□□□□ -1.1
UPF3A-210ENST00000493727 SNRPEP62304 92 aaKnown RBP8.2□□□□□ -1.1
UPF3A-210ENST00000493727 RBX1P62877 108 aa8.2□□□□□ -1.1
UPF3A-210ENST00000493727 MRPL52Q86TS9 123 aaKnown RBP8.2□□□□□ -1.1
UPF3A-210ENST00000493727 HSPB8Q9UJY1 196 aa8.2□□□□□ -1.1
UPF3A-210ENST00000493727 A0A096LNJ9 63 aa8.19□□□□□ -1.1
UPF3A-210ENST00000493727 K7EP13 123 aa8.19□□□□□ -1.1
UPF3A-210ENST00000493727 ATP5LO75964 103 aa8.19□□□□□ -1.1
UPF3A-210ENST00000493727 FABP4P15090 132 aa8.19□□□□□ -1.1
UPF3A-210ENST00000493727 LINC01556Q5JQF7 62 aa8.19□□□□□ -1.1
UPF3A-210ENST00000493727 Q6ZN92 141 aa8.19□□□□□ -1.1
UPF3A-210ENST00000493727 Q6ZUT4 128 aa8.19□□□□□ -1.1
UPF3A-210ENST00000493727 Q8N976 141 aa8.19□□□□□ -1.1
UPF3A-210ENST00000493727 TMEM141Q96I45 108 aa8.19□□□□□ -1.1
UPF3A-210ENST00000493727 TIMM21Q9BVV7 248 aa8.19□□□□□ -1.1
UPF3A-210ENST00000493727 TRAV9-2A0A087WT02 112 aa8.18□□□□□ -1.1
UPF3A-210ENST00000493727 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.18□□□□□ -1.1
UPF3A-210ENST00000493727 ANGP03950 147 aaKnown RBP8.18□□□□□ -1.1
UPF3A-210ENST00000493727 DNAH10OSP0CZ25 163 aa8.18□□□□□ -1.1
UPF3A-210ENST00000493727 PAPPA-AS1Q5QFB9 102 aa8.18□□□□□ -1.1
UPF3A-210ENST00000493727 ERASQ7Z444 233 aa8.18□□□□□ -1.1
UPF3A-210ENST00000493727 SPATA12Q7Z6I5 190 aa8.18□□□□□ -1.1
UPF3A-210ENST00000493727 HIST3H2BBQ8N257 126 aa8.18□□□□□ -1.1
UPF3A-210ENST00000493727 C10orf126Q8N4M7 172 aa8.18□□□□□ -1.1
UPF3A-210ENST00000493727 TIMM17AQ99595 171 aa8.18□□□□□ -1.1
UPF3A-210ENST00000493727 PYGO1Q9Y3Y4 419 aa8.18□□□□□ -1.1
UPF3A-210ENST00000493727 IGLV4-60A0A075B6I1 120 aa8.17□□□□□ -1.1
UPF3A-210ENST00000493727 IGLV4-3A0A075B6K6 122 aa8.17□□□□□ -1.1
UPF3A-210ENST00000493727 A0A1B0GUV1 79 aa8.17□□□□□ -1.1
UPF3A-210ENST00000493727 C5orf52A6NGY3 159 aa8.17□□□□□ -1.1
UPF3A-210ENST00000493727 CRPP02741 224 aa8.17□□□□□ -1.1
UPF3A-210ENST00000493727 RNASE13Q5GAN3 156 aaKnown RBP8.17□□□□□ -1.1
UPF3A-210ENST00000493727 ZNF664Q8N3J9 261 aa8.17□□□□□ -1.1
UPF3A-210ENST00000493727 KRTAP1-5Q9BYS1 174 aa8.17□□□□□ -1.1
UPF3A-210ENST00000493727 KLK12Q9UKR0 248 aa8.17□□□□□ -1.1
UPF3A-210ENST00000493727 CSDC2Q9Y534 153 aaKnown RBP8.17□□□□□ -1.1
UPF3A-210ENST00000493727 IGKV3OR2-268A0A0C4DH90 116 aa8.16□□□□□ -1.1
UPF3A-210ENST00000493727 IGIPA6NJ69 53 aa8.16□□□□□ -1.1
UPF3A-210ENST00000493727 H0Y8G0 127 aa8.16□□□□□ -1.1
UPF3A-210ENST00000493727 MRPS36P82909 103 aaKnown RBP8.16□□□□□ -1.1
UPF3A-210ENST00000493727 CLPSL2Q6UWE3 100 aa8.16□□□□□ -1.1
UPF3A-210ENST00000493727 TEX43Q6ZNM6 134 aa8.16□□□□□ -1.1
UPF3A-210ENST00000493727 IFI27L1Q96BM0 104 aa8.16□□□□□ -1.1
UPF3A-210ENST00000493727 OPRPNQ99935 248 aaPredicted RBP8.16□□□□□ -1.1
UPF3A-210ENST00000493727 C2orf88Q9BSF0 95 aa8.16□□□□□ -1.1
UPF3A-210ENST00000493727 VCX2Q9H322 139 aa8.16□□□□□ -1.1
UPF3A-210ENST00000493727 IFITM10A6NMD0 228 aa8.15□□□□□ -1.1
UPF3A-210ENST00000493727 PRSS1P07477 247 aa8.15□□□□□ -1.1
UPF3A-210ENST00000493727 NPSP0C0P6 89 aa8.15□□□□□ -1.1
UPF3A-210ENST00000493727 LINC00173Q6ZV60 143 aa8.15□□□□□ -1.1
UPF3A-210ENST00000493727 LINC00269Q8N2A0 174 aa8.15□□□□□ -1.1
UPF3A-210ENST00000493727 UBE2WQ96B02 151 aa8.15□□□□□ -1.1
UPF3A-210ENST00000493727 PACRGQ96M98 296 aaPredicted RBP8.15□□□□□ -1.1
UPF3A-210ENST00000493727 MAP1LC3CQ9BXW4 147 aa8.15□□□□□ -1.1
UPF3A-210ENST00000493727 CDC42SE2Q9NRR3 84 aa8.15□□□□□ -1.1
UPF3A-210ENST00000493727 BAALCQ8WXS3 180 aa8.14□□□□□ -1.11
UPF3A-210ENST00000493727 HIST1H2BLQ99880 126 aa8.14□□□□□ -1.11
UPF3A-210ENST00000493727 FLG2Q5D862 2391 aaPredicted RBP8.14□□□□□ -1.11
UPF3A-210ENST00000493727 TRAV13-1A0A0B4J241 112 aa8.13□□□□□ -1.11
UPF3A-210ENST00000493727 KRTDAPP60985 99 aa8.13□□□□□ -1.11
UPF3A-210ENST00000493727 REG3AQ06141 175 aa8.13□□□□□ -1.11
UPF3A-210ENST00000493727 PMVKQ15126 192 aa8.13□□□□□ -1.11
UPF3A-210ENST00000493727 NFE4Q86UQ8 179 aa8.13□□□□□ -1.11
UPF3A-210ENST00000493727 ZC2HC1BQ5TFG8 222 aa8.12□□□□□ -1.11
UPF3A-210ENST00000493727 Q9HAA7 133 aa8.12□□□□□ -1.11
UPF3A-210ENST00000493727 IBA57-AS1B1ANH7 110 aa8.11□□□□□ -1.11
UPF3A-210ENST00000493727 SS18Q15532 418 aa8.11□□□□□ -1.11
UPF3A-210ENST00000493727 Q6ZRN7 208 aaPredicted RBP8.11□□□□□ -1.11
UPF3A-210ENST00000493727 AMELXQ99217 191 aa8.11□□□□□ -1.11
UPF3A-210ENST00000493727 TRAV8-3A0A0A6YYJ7 113 aa8.1□□□□□ -1.11
UPF3A-210ENST00000493727 MIAQ16674 131 aa8.1□□□□□ -1.11
UPF3A-210ENST00000493727 FAM104AQ969W3 186 aa8.1□□□□□ -1.11
UPF3A-210ENST00000493727 RMI2Q96E14 147 aa8.1□□□□□ -1.11
UPF3A-210ENST00000493727 CST9LQ9H4G1 147 aa8.1□□□□□ -1.11
UPF3A-210ENST00000493727 PRR34Q9NV39 138 aa8.1□□□□□ -1.11
UPF3A-210ENST00000493727 IGLV10-54A0A075B6I4 117 aa8.09□□□□□ -1.11
UPF3A-210ENST00000493727 IGKV2D-24A0A075B6R9 120 aa8.09□□□□□ -1.11
UPF3A-210ENST00000493727 TRAV12-1A0A0B4J245 112 aa8.09□□□□□ -1.11
UPF3A-210ENST00000493727 LINC00959A0A1B0GUT2 108 aa8.09□□□□□ -1.11
UPF3A-210ENST00000493727 C20orf202A1L168 122 aa8.09□□□□□ -1.11
UPF3A-210ENST00000493727 SYS1-DBNDD2H3BUS1 97 aa8.09□□□□□ -1.11
UPF3A-210ENST00000493727 C3orf79P0CE67 100 aa8.09□□□□□ -1.11
UPF3A-210ENST00000493727 ENHOQ6UWT2 76 aa8.09□□□□□ -1.11
UPF3A-210ENST00000493727 OR10D4PQ8NGN7 298 aa8.09□□□□□ -1.11
UPF3A-210ENST00000493727 CHTOPQ9Y3Y2 248 aaKnown RBP8.09□□□□□ -1.11
UPF3A-210ENST00000493727 TRAV8-4A0A0B4J246 113 aa8.08□□□□□ -1.12
UPF3A-210ENST00000493727 CCL25O15444 150 aa8.08□□□□□ -1.12
UPF3A-210ENST00000493727 XCL1P47992 114 aa8.08□□□□□ -1.12
UPF3A-210ENST00000493727 UBE2D1P51668 147 aa8.08□□□□□ -1.12
UPF3A-210ENST00000493727 SEC11AP67812 179 aa8.08□□□□□ -1.12
UPF3A-210ENST00000493727 PET117Q6UWS5 81 aa8.08□□□□□ -1.12
UPF3A-210ENST00000493727 GEMIN7Q9H840 131 aaKnown RBP8.08□□□□□ -1.12
UPF3A-210ENST00000493727 A0A0J9YXV3 536 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms