RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 A8MZ25 164 aa7.54□□□□□ -1.2
PHACTR4-204ENST00000493669 IFITM1P13164 125 aa7.54□□□□□ -1.2
PHACTR4-204ENST00000493669 SHISA2Q6UWI4 295 aa7.54□□□□□ -1.2
PHACTR4-204ENST00000493669 PRO1854Q9UHT4 67 aa7.54□□□□□ -1.2
PHACTR4-204ENST00000493669 TRAV26-1A0A087WT03 109 aa7.54□□□□□ -1.2
PHACTR4-204ENST00000493669 A0A1B0GUV1 79 aa7.54□□□□□ -1.2
PHACTR4-204ENST00000493669 TSPAN13O95857 204 aa7.54□□□□□ -1.2
PHACTR4-204ENST00000493669 ATP5G1P05496 136 aa7.54□□□□□ -1.2
PHACTR4-204ENST00000493669 SPART-AS1P0CW21 52 aa7.54□□□□□ -1.2
PHACTR4-204ENST00000493669 CIRBPQ14011 172 aaKnown RBP7.53□□□□□ -1.2
PHACTR4-204ENST00000493669 HERV-K104P63124 156 aa7.53□□□□□ -1.2
PHACTR4-204ENST00000493669 EGFEM1PQ0D2K5 195 aa7.53□□□□□ -1.2
PHACTR4-204ENST00000493669 IGLV4-60A0A075B6I1 120 aa7.52□□□□□ -1.21
PHACTR4-204ENST00000493669 COPS9Q8WXC6 57 aa7.52□□□□□ -1.21
PHACTR4-204ENST00000493669 SH2D6Q7Z4S9 175 aa7.52□□□□□ -1.21
PHACTR4-204ENST00000493669 C3orf56Q8N813 242 aa7.52□□□□□ -1.21
PHACTR4-204ENST00000493669 F8W1H4 67 aa7.51□□□□□ -1.21
PHACTR4-204ENST00000493669 ZNF625Q96I27 306 aaPredicted RBP7.51□□□□□ -1.21
PHACTR4-204ENST00000493669 PPDPFQ9H3Y8 114 aa7.51□□□□□ -1.21
PHACTR4-204ENST00000493669 Q9H8V8 135 aa7.51□□□□□ -1.21
PHACTR4-204ENST00000493669 ADAMTSL4-AS1Q5T5F5 129 aa7.51□□□□□ -1.21
PHACTR4-204ENST00000493669 DEFB4AO15263 64 aa7.5□□□□□ -1.21
PHACTR4-204ENST00000493669 PRSS2P07478 247 aa7.5□□□□□ -1.21
PHACTR4-204ENST00000493669 OCIAD2Q56VL3 154 aa7.5□□□□□ -1.21
PHACTR4-204ENST00000493669 CELA1Q9UNI1 258 aa7.5□□□□□ -1.21
PHACTR4-204ENST00000493669 TRBV20-1A0A075B6N2 111 aa7.5□□□□□ -1.21
PHACTR4-204ENST00000493669 IGHV3OR16-9A0A0B4J2B5 98 aa7.5□□□□□ -1.21
PHACTR4-204ENST00000493669 IGHV3-33P01772 117 aa7.5□□□□□ -1.21
PHACTR4-204ENST00000493669 ERG28Q9UKR5 140 aa7.5□□□□□ -1.21
PHACTR4-204ENST00000493669 A0A087WZ39 114 aa7.49□□□□□ -1.21
PHACTR4-204ENST00000493669 RBX1P62877 108 aa7.49□□□□□ -1.21
PHACTR4-204ENST00000493669 OXLD1Q5BKU9 147 aa7.49□□□□□ -1.21
PHACTR4-204ENST00000493669 LINC00959A0A1B0GUT2 108 aa7.49□□□□□ -1.21
PHACTR4-204ENST00000493669 K7ERU9 68 aa7.49□□□□□ -1.21
PHACTR4-204ENST00000493669 MRPL23Q16540 153 aaKnown RBP7.49□□□□□ -1.21
PHACTR4-204ENST00000493669 SFTA2Q6UW10 78 aa7.49□□□□□ -1.21
PHACTR4-204ENST00000493669 PRIMA1Q86XR5 153 aa7.49□□□□□ -1.21
PHACTR4-204ENST00000493669 LINC01561Q8N1V8 128 aa7.49□□□□□ -1.21
PHACTR4-204ENST00000493669 LOC107984156A0A0G2JMH3 177 aa7.48□□□□□ -1.21
PHACTR4-204ENST00000493669 EIF4EBP3O60516 100 aaPredicted RBP7.48□□□□□ -1.21
PHACTR4-204ENST00000493669 KRTAP10-11P60412 298 aa7.48□□□□□ -1.21
PHACTR4-204ENST00000493669 ARL17AQ8IVW1 177 aa7.48□□□□□ -1.21
PHACTR4-204ENST00000493669 COX7B2Q8TF08 81 aa7.48□□□□□ -1.21
PHACTR4-204ENST00000493669 TMEM262E9PQX1 116 aa7.48□□□□□ -1.21
PHACTR4-204ENST00000493669 H3BMG7 143 aa7.48□□□□□ -1.21
PHACTR4-204ENST00000493669 SS18Q15532 418 aa7.48□□□□□ -1.21
PHACTR4-204ENST00000493669 FLNBO75369 2602 aaKnown RBP7.47□□□□□ -1.21
PHACTR4-204ENST00000493669 ICOSQ9Y6W8 199 aa7.47□□□□□ -1.21
PHACTR4-204ENST00000493669 IGKV3OR2-268A0A0C4DH90 116 aa7.46□□□□□ -1.21
PHACTR4-204ENST00000493669 LINC00308Q8TCZ7 52 aa7.46□□□□□ -1.21
PHACTR4-204ENST00000493669 PRO0461Q9UI25 63 aa7.46□□□□□ -1.21
PHACTR4-204ENST00000493669 MEIG1Q5JSS6 88 aa7.46□□□□□ -1.22
PHACTR4-204ENST00000493669 A0A096LPF7 62 aa7.46□□□□□ -1.22
PHACTR4-204ENST00000493669 LELP1Q5T871 98 aa7.46□□□□□ -1.22
PHACTR4-204ENST00000493669 C11orf68Q9H3H3 251 aaKnown RBP7.46□□□□□ -1.22
PHACTR4-204ENST00000493669 TRBV30A0A0K0K1B3 111 aa7.45□□□□□ -1.22
PHACTR4-204ENST00000493669 H3BNG1 76 aa7.45□□□□□ -1.22
PHACTR4-204ENST00000493669 PSMB2P49721 201 aa7.45□□□□□ -1.22
PHACTR4-204ENST00000493669 SCGB1C2P0DMR2 95 aa7.44□□□□□ -1.22
PHACTR4-204ENST00000493669 Q1RN00 199 aa7.44□□□□□ -1.22
PHACTR4-204ENST00000493669 TCL1BO95988 128 aa7.43□□□□□ -1.22
PHACTR4-204ENST00000493669 HTN3P15516 51 aa7.43□□□□□ -1.22
PHACTR4-204ENST00000493669 WFDC2Q14508 124 aa7.43□□□□□ -1.22
PHACTR4-204ENST00000493669 DAND5Q8N907 189 aa7.43□□□□□ -1.22
PHACTR4-204ENST00000493669 NBEAL2Q6ZNJ1 2754 aa7.43□□□□□ -1.22
PHACTR4-204ENST00000493669 NPC2P61916 151 aa7.43□□□□□ -1.22
PHACTR4-204ENST00000493669 CD164L2Q6UWJ8 174 aa7.43□□□□□ -1.22
PHACTR4-204ENST00000493669 C5orf38Q86SI9 138 aa7.43□□□□□ -1.22
PHACTR4-204ENST00000493669 TOMM7Q9P0U1 55 aa7.43□□□□□ -1.22
PHACTR4-204ENST00000493669 IBA57-AS1B1ANH7 110 aa7.42□□□□□ -1.22
PHACTR4-204ENST00000493669 Q8IZM0 81 aa7.42□□□□□ -1.22
PHACTR4-204ENST00000493669 XCL1P47992 114 aa7.42□□□□□ -1.22
PHACTR4-204ENST00000493669 CBY1Q9Y3M2 126 aa7.42□□□□□ -1.22
PHACTR4-204ENST00000493669 G3V4G9 280 aa7.41□□□□□ -1.22
PHACTR4-204ENST00000493669 H7C2G1 150 aa7.41□□□□□ -1.22
PHACTR4-204ENST00000493669 COX6CP09669 75 aa7.41□□□□□ -1.22
PHACTR4-204ENST00000493669 LINC00269Q8N2A0 174 aa7.41□□□□□ -1.22
PHACTR4-204ENST00000493669 M0QXV9 152 aa7.41□□□□□ -1.22
PHACTR4-204ENST00000493669 ANGP03950 147 aaKnown RBP7.41□□□□□ -1.22
PHACTR4-204ENST00000493669 REG3AQ06141 175 aa7.41□□□□□ -1.22
PHACTR4-204ENST00000493669 TRRAPQ9Y4A5 3859 aa7.41□□□□□ -1.22
PHACTR4-204ENST00000493669 TRIAP1O43715 76 aa7.41□□□□□ -1.22
PHACTR4-204ENST00000493669 RPL13AP40429 203 aaKnown RBP7.41□□□□□ -1.22
PHACTR4-204ENST00000493669 ATXN8Q156A1 80 aa7.41□□□□□ -1.22
PHACTR4-204ENST00000493669 SOSTDC1Q6X4U4 206 aa7.41□□□□□ -1.22
PHACTR4-204ENST00000493669 J3QR89 54 aa7.4□□□□□ -1.22
PHACTR4-204ENST00000493669 RETNQ9HD89 108 aa7.4□□□□□ -1.22
PHACTR4-204ENST00000493669 COX7A2LO14548 114 aa7.4□□□□□ -1.23
PHACTR4-204ENST00000493669 CXCL5P42830 114 aa7.4□□□□□ -1.23
PHACTR4-204ENST00000493669 C6orf226Q5I0X4 101 aa7.4□□□□□ -1.23
PHACTR4-204ENST00000493669 CHCHD10Q8WYQ3 142 aaPredicted RBP7.4□□□□□ -1.23
PHACTR4-204ENST00000493669 A0A0U1RRA0 63 aa7.39□□□□□ -1.23
PHACTR4-204ENST00000493669 CLPSL2Q6UWE3 100 aa7.39□□□□□ -1.23
PHACTR4-204ENST00000493669 SMCPP49901 116 aaPredicted RBP7.38□□□□□ -1.23
PHACTR4-204ENST00000493669 RNF151Q2KHN1 245 aa7.38□□□□□ -1.23
PHACTR4-204ENST00000493669 ETDBQ3ZM63 59 aa7.38□□□□□ -1.23
PHACTR4-204ENST00000493669 LYPD5Q6UWN5 251 aa7.38□□□□□ -1.23
PHACTR4-204ENST00000493669 MIR7-3HGQ8N6C7 128 aa7.38□□□□□ -1.23
PHACTR4-204ENST00000493669 PRR34Q9NV39 138 aa7.38□□□□□ -1.23
PHACTR4-204ENST00000493669 LINC01600Q96MT4 127 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 603.3 ms