RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	TMEM191A	Q9H0A3	160 aa		11.24	□□□□□ -0.61
CDK5RAP2-218	ENST00000491334	MUC17	Q685J3	4493 aa		11.23	□□□□□ -0.61
CDK5RAP2-218	ENST00000491334	IGLV7-46	A0A075B6I9	117 aa		11.23	□□□□□ -0.61
CDK5RAP2-218	ENST00000491334	RAB4A	P20338	218 aa		11.23	□□□□□ -0.61
CDK5RAP2-218	ENST00000491334	LINC01547	P58512	204 aa	Predicted RBP	11.23	□□□□□ -0.61
CDK5RAP2-218	ENST00000491334	TRBV30	A0A0K0K1B3	111 aa		11.22	□□□□□ -0.61
CDK5RAP2-218	ENST00000491334	NDUFC2-KCTD14	E9PQ53	114 aa		11.22	□□□□□ -0.61
CDK5RAP2-218	ENST00000491334	GATC	O43716	136 aa	Known RBP	11.22	□□□□□ -0.61
CDK5RAP2-218	ENST00000491334	PPP1R17	O96001	155 aa		11.22	□□□□□ -0.61
CDK5RAP2-218	ENST00000491334	RPL28	P46779	137 aa	Known RBP	11.22	□□□□□ -0.61
CDK5RAP2-218	ENST00000491334	C9orf129	Q5T035	196 aa	Known RBP	11.22	□□□□□ -0.61
CDK5RAP2-218	ENST00000491334	CTDSP1	Q9GZU7	261 aa		11.22	□□□□□ -0.61
CDK5RAP2-218	ENST00000491334	LBH	Q53QV2	105 aa	Predicted RBP	11.21	□□□□□ -0.61
CDK5RAP2-218	ENST00000491334	SMLR1	H3BR10	107 aa		11.2	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	SUMO2	P61956	95 aa	Known RBP	11.2	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334		A0A1B0GUT8	65 aa		11.19	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	LINC00173	Q6ZV60	143 aa		11.19	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	PACRG	Q96M98	296 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	KIAA0087	Q14695	138 aa		11.18	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	AMN1	Q8IY45	258 aa		11.18	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	C22orf24	Q9Y442	160 aa		11.18	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	HMSD	A8MTL9	139 aa		11.17	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	LINC00304	Q8N9R0	145 aa		11.17	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.16	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	SMKR1	H3BMG3	65 aa		11.16	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	PPP1R2P9	O14990	202 aa		11.16	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	TAGLN2	P37802	199 aa	Known RBP	11.16	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	CT83	Q5H943	113 aa		11.16	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	FAM231D	Q6ZW35	169 aa		11.16	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	CTAG1A	P78358	180 aa		11.15	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	C2orf82	Q6UX34	121 aa		11.15	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	ANAPC11	Q9NYG5	84 aa		11.15	□□□□□ -0.62
CDK5RAP2-218	ENST00000491334	IFITM10	A6NMD0	228 aa		11.14	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	TCAP	O15273	167 aa		11.14	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	BCE1	O60756	84 aa		11.14	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	HBB	P68871	147 aa		11.14	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	NRAC	Q8N912	160 aa		11.14	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	SPANXA1	Q9NS26	97 aa		11.14	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	HIGD1C	A8MV81	97 aa		11.13	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	RPL39	P62891	51 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	MRPS36	P82909	103 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	KRTAP13-2	Q52LG2	175 aa		11.13	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	FAM104A	Q969W3	186 aa		11.13	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	PPDPF	Q9H3Y8	114 aa		11.13	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	ZNF727	A8MUV8	499 aa		11.12	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	FAM229B	Q4G0N7	80 aa		11.1	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	TP73-AS1	Q9UF72	201 aa		11.1	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	RIG	Q13278	110 aa		11.09	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	LINC00242	Q5T6M2	205 aa		11.09	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	MRPL55	Q7Z7F7	128 aa	Known RBP	11.09	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	LINC00469	Q8N7U9	141 aa		11.09	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	C20orf78	Q9BR46	151 aa		11.09	□□□□□ -0.63
CDK5RAP2-218	ENST00000491334	SRSF3	P84103	164 aa	Known RBP	11.08	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	IGKV2D-26	A0A0A0MRZ7	120 aa		11.07	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	RPL32	P62910	135 aa	Known RBP	11.07	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	LINC00337	Q8N6G1	96 aa		11.07	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	XAGE1A	Q9HD64	81 aa		11.07	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	PRSS2	P07478	247 aa		11.06	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	CKS1B	P61024	79 aa		11.06	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	LINC01561	Q8N1V8	128 aa		11.06	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	TRBV24-1	A0A075B6N3	115 aa		11.05	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	LINC00862	A6NCI5	91 aa		11.05	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	TMEM250	H0YL14	139 aa		11.04	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	ASB16-AS1	Q495Z4	193 aa		11.04	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	MRPL51	Q4U2R6	128 aa	Known RBP	11.04	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	C6orf226	Q5I0X4	101 aa		11.04	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	UBE2A	P49459	152 aa		11.03	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	FAM104B	Q5XKR9	115 aa		11.03	□□□□□ -0.64
CDK5RAP2-218	ENST00000491334	RPL37AP8	A6NKH3	93 aa		11.02	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	CKS2	P33552	79 aa		11.02	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	LINC00167	Q96N53	147 aa		11.02	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	IFI27	P40305	119 aa	Predicted RBP	11.01	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	TOMM7	Q9P0U1	55 aa		11.01	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	TNFRSF6B	O95407	300 aa		11	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334		Q6ZN92	141 aa		11	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	SMIM2	Q9BVW6	85 aa		11	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	OSTC	Q9NRP0	149 aa		11	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	CEBPG	P53567	150 aa		10.99	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	FP248	Q71RG6	208 aa	Predicted RBP	10.99	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	PYGO1	Q9Y3Y4	419 aa		10.99	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	KRTAP13-1	Q8IUC0	172 aa		10.98	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	TMEM141	Q96I45	108 aa		10.98	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	SEC61B	P60468	96 aa	Known RBP	10.97	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	SPAG11A	Q6PDA7	123 aa		10.97	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	LINC01551	Q86U37	167 aa		10.97	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334		Q8IZM0	81 aa		10.97	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	ALKBH7	Q9BT30	221 aa	Predicted RBP	10.97	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	IGLV4-3	A0A075B6K6	122 aa		10.96	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	RAB5A	P20339	215 aa		10.96	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	RGS21	Q2M5E4	152 aa		10.96	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	TEX43	Q6ZNM6	134 aa		10.96	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	KRTAP4-1	Q9BYQ7	146 aa		10.96	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	NAT8B	Q9UHF3	227 aa		10.96	□□□□□ -0.65
CDK5RAP2-218	ENST00000491334	GAGE10	A6NGK3	116 aa		10.95	□□□□□ -0.66
CDK5RAP2-218	ENST00000491334	C2orf88	Q9BSF0	95 aa		10.95	□□□□□ -0.66
CDK5RAP2-218	ENST00000491334		F8VRH5	84 aa		10.94	□□□□□ -0.66
CDK5RAP2-218	ENST00000491334	KRTAP13-3	Q3SY46	172 aa		10.94	□□□□□ -0.66
CDK5RAP2-218	ENST00000491334	SMIM7	Q9BQ49	75 aa		10.94	□□□□□ -0.66
CDK5RAP2-218	ENST00000491334	EIF5A2	Q9GZV4	153 aa	Known RBP	10.94	□□□□□ -0.66
CDK5RAP2-218	ENST00000491334		V9GYV3	84 aa		10.94	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms