RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 Q1RN00 199 aa16.13■□□□□ 0.17
USF3-203ENST00000491165 OVOL2Q9BRP0 275 aa16.13■□□□□ 0.17
USF3-203ENST00000491165 NDUFA12Q9UI09 145 aa16.13■□□□□ 0.17
USF3-203ENST00000491165 ANKRD29Q8N6D5 301 aa16.12■□□□□ 0.17
USF3-203ENST00000491165 VSIG2Q96IQ7 327 aa16.12■□□□□ 0.17
USF3-203ENST00000491165 Q6ZUT4 128 aa16.11■□□□□ 0.17
USF3-203ENST00000491165 PLAC8L1A1L4L8 177 aa16.1■□□□□ 0.17
USF3-203ENST00000491165 M0QXV9 152 aa16.1■□□□□ 0.17
USF3-203ENST00000491165 SLC25A20O43772 301 aa16.1■□□□□ 0.17
USF3-203ENST00000491165 SPANXDQ9BXN6 97 aa16.1■□□□□ 0.17
USF3-203ENST00000491165 SPANXCQ9NY87 97 aa16.1■□□□□ 0.17
USF3-203ENST00000491165 C9JAW5 83 aa16.1■□□□□ 0.17
USF3-203ENST00000491165 FBN3Q75N90 2809 aa16.1■□□□□ 0.17
USF3-203ENST00000491165 IGHV3-38A0A0C4DH36 116 aa16.09■□□□□ 0.17
USF3-203ENST00000491165 RS1O15537 224 aa16.09■□□□□ 0.17
USF3-203ENST00000491165 PRSS2P07478 247 aa16.09■□□□□ 0.17
USF3-203ENST00000491165 SPINK8P0C7L1 97 aa16.09■□□□□ 0.17
USF3-203ENST00000491165 TM2D3Q9BRN9 247 aa16.08■□□□□ 0.16
USF3-203ENST00000491165 GEMIN7Q9H840 131 aaKnown RBP16.08■□□□□ 0.16
USF3-203ENST00000491165 DEFB4AO15263 64 aa16.07■□□□□ 0.16
USF3-203ENST00000491165 ATXN8Q156A1 80 aa16.07■□□□□ 0.16
USF3-203ENST00000491165 ADAMTSL4-AS1Q5T5F5 129 aa16.07■□□□□ 0.16
USF3-203ENST00000491165 MIAQ16674 131 aa16.07■□□□□ 0.16
USF3-203ENST00000491165 TRBV30A0A0K0K1B3 111 aa16.06■□□□□ 0.16
USF3-203ENST00000491165 Q8NAQ8 132 aa16.06■□□□□ 0.16
USF3-203ENST00000491165 ZFAND6Q6FIF0 208 aa16.06■□□□□ 0.16
USF3-203ENST00000491165 IL17DQ8TAD2 202 aa16.04■□□□□ 0.16
USF3-203ENST00000491165 IGHV4-28A0A0C4DH34 117 aa16.04■□□□□ 0.16
USF3-203ENST00000491165 A0A1B0GV72 72 aa16.04■□□□□ 0.16
USF3-203ENST00000491165 TRIAP1O43715 76 aa16.04■□□□□ 0.16
USF3-203ENST00000491165 B9D2Q9BPU9 175 aa16.03■□□□□ 0.16
USF3-203ENST00000491165 TIRAPP58753 221 aa16.03■□□□□ 0.16
USF3-203ENST00000491165 LINC01620Q4KN68 170 aa16.03■□□□□ 0.16
USF3-203ENST00000491165 C16orf74Q96GX8 76 aa16.03■□□□□ 0.16
USF3-203ENST00000491165 DGAT2L7PQ6IED9 249 aa16.02■□□□□ 0.16
USF3-203ENST00000491165 CDKN2A-AS1Q9UH64 79 aa16.02■□□□□ 0.16
USF3-203ENST00000491165 IGLV5-45A0A087WSX0 123 aa16.01■□□□□ 0.15
USF3-203ENST00000491165 SMIM9A6NGZ8 99 aa16.01■□□□□ 0.15
USF3-203ENST00000491165 TIMM17BO60830 172 aa16.01■□□□□ 0.15
USF3-203ENST00000491165 MT-ATP8P03928 68 aa16.01■□□□□ 0.15
USF3-203ENST00000491165 XGP55808 180 aa16.01■□□□□ 0.15
USF3-203ENST00000491165 NOP10Q9NPE3 64 aaKnown RBP16.01■□□□□ 0.15
USF3-203ENST00000491165 TMEM262E9PQX1 116 aa16■□□□□ 0.15
USF3-203ENST00000491165 MIFP14174 115 aa16■□□□□ 0.15
USF3-203ENST00000491165 ICOSQ9Y6W8 199 aa16■□□□□ 0.15
USF3-203ENST00000491165 NPC2P61916 151 aa16■□□□□ 0.15
USF3-203ENST00000491165 STAB2Q8WWQ8 2551 aa15.99■□□□□ 0.15
USF3-203ENST00000491165 CIDEAO60543 219 aa15.99■□□□□ 0.15
USF3-203ENST00000491165 NDUFA1O15239 70 aa15.98■□□□□ 0.15
USF3-203ENST00000491165 IFITM1P13164 125 aa15.98■□□□□ 0.15
USF3-203ENST00000491165 TRGV1A0A0A0MS02 117 aa15.98■□□□□ 0.15
USF3-203ENST00000491165 TMEM101Q96IK0 257 aa15.98■□□□□ 0.15
USF3-203ENST00000491165 LINC01600Q96MT4 127 aa15.98■□□□□ 0.15
USF3-203ENST00000491165 TRBV10-2A0A0K0K1G8 114 aa15.97■□□□□ 0.15
USF3-203ENST00000491165 Q6ZTI0 123 aa15.97■□□□□ 0.15
USF3-203ENST00000491165 CELA1Q9UNI1 258 aa15.97■□□□□ 0.15
USF3-203ENST00000491165 COX6CP09669 75 aa15.97■□□□□ 0.15
USF3-203ENST00000491165 CKS1BP61024 79 aa15.97■□□□□ 0.15
USF3-203ENST00000491165 HERVK_113P63121 156 aa15.96■□□□□ 0.15
USF3-203ENST00000491165 DAZ2Q13117 558 aaKnown RBP15.96■□□□□ 0.15
USF3-203ENST00000491165 NTN5Q8WTR8 489 aaPredicted RBP15.95■□□□□ 0.14
USF3-203ENST00000491165 COX6A2Q02221 97 aa15.95■□□□□ 0.14
USF3-203ENST00000491165 RPL36AP83881 106 aaKnown RBP15.94■□□□□ 0.14
USF3-203ENST00000491165 CIRBPQ14011 172 aaKnown RBP15.94■□□□□ 0.14
USF3-203ENST00000491165 FAM222AQ5U5X8 452 aa15.94■□□□□ 0.14
USF3-203ENST00000491165 RPL36ALQ969Q0 106 aaKnown RBP15.94■□□□□ 0.14
USF3-203ENST00000491165 A0A0J9YWU9 116 aa15.94■□□□□ 0.14
USF3-203ENST00000491165 TGP01266 2768 aa15.93■□□□□ 0.14
USF3-203ENST00000491165 IGLV5-39A0A0G2JS06 123 aa15.93■□□□□ 0.14
USF3-203ENST00000491165 TRBV10-1A0A0K0K1A3 114 aa15.93■□□□□ 0.14
USF3-203ENST00000491165 K7EQD1 137 aa15.93■□□□□ 0.14
USF3-203ENST00000491165 LINC00242Q5T6M2 205 aa15.93■□□□□ 0.14
USF3-203ENST00000491165 DAND5Q8N907 189 aa15.92■□□□□ 0.14
USF3-203ENST00000491165 LINC00694P0DN24 101 aa15.92■□□□□ 0.14
USF3-203ENST00000491165 RPL13AP40429 203 aaKnown RBP15.92■□□□□ 0.14
USF3-203ENST00000491165 FAM19A3Q7Z5A8 133 aa15.92■□□□□ 0.14
USF3-203ENST00000491165 CSDC2Q9Y534 153 aaKnown RBP15.92■□□□□ 0.14
USF3-203ENST00000491165 DAZ4Q86SG3 579 aaKnown RBP15.91■□□□□ 0.14
USF3-203ENST00000491165 DAZ3Q9NR90 486 aaKnown RBP15.91■□□□□ 0.14
USF3-203ENST00000491165 GAGE7O76087 117 aa15.91■□□□□ 0.14
USF3-203ENST00000491165 GAGE12FP0CL80 117 aa15.91■□□□□ 0.14
USF3-203ENST00000491165 GAGE12GP0CL81 117 aa15.91■□□□□ 0.14
USF3-203ENST00000491165 GAGE12IP0CL82 117 aa15.91■□□□□ 0.14
USF3-203ENST00000491165 Q9H8V8 135 aa15.91■□□□□ 0.14
USF3-203ENST00000491165 TRAV4A0A0B4J268 109 aa15.89■□□□□ 0.13
USF3-203ENST00000491165 DEFB130BP0DP73 79 aa15.89■□□□□ 0.13
USF3-203ENST00000491165 DEFB130AP0DP74 79 aa15.89■□□□□ 0.13
USF3-203ENST00000491165 C11orf68Q9H3H3 251 aaKnown RBP15.89■□□□□ 0.13
USF3-203ENST00000491165 C2orf82Q6UX34 121 aa15.89■□□□□ 0.13
USF3-203ENST00000491165 LINC00612Q8N6U2 182 aa15.89■□□□□ 0.13
USF3-203ENST00000491165 TEX49A0A1B0GTD5 131 aa15.88■□□□□ 0.13
USF3-203ENST00000491165 H7C423 109 aa15.88■□□□□ 0.13
USF3-203ENST00000491165 NTM-AS1Q6ZSK4 140 aa15.88■□□□□ 0.13
USF3-203ENST00000491165 UBE2WQ96B02 151 aa15.88■□□□□ 0.13
USF3-203ENST00000491165 H3BT86 120 aa15.88■□□□□ 0.13
USF3-203ENST00000491165 CLEC2BQ92478 149 aa15.88■□□□□ 0.13
USF3-203ENST00000491165 SMIM1B2RUZ4 78 aa15.87■□□□□ 0.13
USF3-203ENST00000491165 LST1O00453 97 aa15.87■□□□□ 0.13
USF3-203ENST00000491165 LINC00308Q8TCZ7 52 aa15.87■□□□□ 0.13
USF3-203ENST00000491165 CSMD3Q7Z407 3707 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 2049.3 ms