RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 IGHV3OR16-9A0A0B4J2B5 98 aa8.32□□□□□ -1.08
SHC1-211ENST00000490667 KRTAP29-1A8MX34 341 aaPredicted RBP8.32□□□□□ -1.08
SHC1-211ENST00000490667 Q6ZRU5 148 aa8.32□□□□□ -1.08
SHC1-211ENST00000490667 STPG4Q8N801 248 aa8.32□□□□□ -1.08
SHC1-211ENST00000490667 C2orf48Q96LS8 159 aa8.32□□□□□ -1.08
SHC1-211ENST00000490667 CAMK2N2Q96S95 79 aa8.32□□□□□ -1.08
SHC1-211ENST00000490667 LINC00474Q9P2X8 69 aa8.32□□□□□ -1.08
SHC1-211ENST00000490667 MYCBP2O75592 4640 aa8.32□□□□□ -1.08
SHC1-211ENST00000490667 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
SHC1-211ENST00000490667 S100PP25815 95 aa8.31□□□□□ -1.08
SHC1-211ENST00000490667 KIAA1644Q3SXP7 199 aa8.31□□□□□ -1.08
SHC1-211ENST00000490667 ORMDL2Q53FV1 153 aa8.31□□□□□ -1.08
SHC1-211ENST00000490667 C2orf66Q6UXQ4 117 aa8.31□□□□□ -1.08
SHC1-211ENST00000490667 TMEM141Q96I45 108 aa8.31□□□□□ -1.08
SHC1-211ENST00000490667 NXT2Q9NPJ8 142 aaKnown RBP8.31□□□□□ -1.08
SHC1-211ENST00000490667 CYSLTR1Q9Y271 337 aa8.31□□□□□ -1.08
SHC1-211ENST00000490667 K7EMI3 77 aa8.3□□□□□ -1.08
SHC1-211ENST00000490667 SPAG11BQ08648 103 aa8.3□□□□□ -1.08
SHC1-211ENST00000490667 C10orf91Q5T1B1 145 aa8.3□□□□□ -1.08
SHC1-211ENST00000490667 OR10D4PQ8NGN7 298 aa8.3□□□□□ -1.08
SHC1-211ENST00000490667 C7orf33Q8WU49 177 aa8.3□□□□□ -1.08
SHC1-211ENST00000490667 LOC107984640A0A0U1RRK4 108 aa8.29□□□□□ -1.08
SHC1-211ENST00000490667 HNRNPA3P51991 378 aaKnown RBP8.29□□□□□ -1.08
SHC1-211ENST00000490667 GAGE2BQ13066 116 aa8.29□□□□□ -1.08
SHC1-211ENST00000490667 TEX43Q6ZNM6 134 aa8.29□□□□□ -1.08
SHC1-211ENST00000490667 ORAOV1Q8WV07 137 aa8.29□□□□□ -1.08
SHC1-211ENST00000490667 GNB1LQ9BYB4 327 aa8.29□□□□□ -1.08
SHC1-211ENST00000490667 HERC1Q15751 4861 aa8.28□□□□□ -1.08
SHC1-211ENST00000490667 TGIF2-C20orf24A0A0A6YYL0 155 aa8.28□□□□□ -1.08
SHC1-211ENST00000490667 OXTP01178 125 aa8.28□□□□□ -1.08
SHC1-211ENST00000490667 G0S2P27469 103 aa8.28□□□□□ -1.08
SHC1-211ENST00000490667 LINC00242Q5T6M2 205 aa8.28□□□□□ -1.08
SHC1-211ENST00000490667 VCX2Q9H322 139 aa8.28□□□□□ -1.08
SHC1-211ENST00000490667 RPS10P5Q9NQ39 176 aa8.28□□□□□ -1.08
SHC1-211ENST00000490667 CARHSP1Q9Y2V2 147 aaKnown RBP8.28□□□□□ -1.08
SHC1-211ENST00000490667 IGIPA6NJ69 53 aa8.27□□□□□ -1.09
SHC1-211ENST00000490667 F8WDY8 70 aa8.27□□□□□ -1.09
SHC1-211ENST00000490667 PTTG1IPP53801 180 aa8.27□□□□□ -1.09
SHC1-211ENST00000490667 RNF151Q2KHN1 245 aa8.27□□□□□ -1.09
SHC1-211ENST00000490667 ZC2HC1BQ5TFG8 222 aa8.27□□□□□ -1.09
SHC1-211ENST00000490667 Q6ZN92 141 aa8.27□□□□□ -1.09
SHC1-211ENST00000490667 AMELXQ99217 191 aa8.27□□□□□ -1.09
SHC1-211ENST00000490667 A0A087WZ39 114 aa8.26□□□□□ -1.09
SHC1-211ENST00000490667 A0A0J9YXV3 536 aa8.26□□□□□ -1.09
SHC1-211ENST00000490667 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.26□□□□□ -1.09
SHC1-211ENST00000490667 NPSP0C0P6 89 aa8.26□□□□□ -1.09
SHC1-211ENST00000490667 UBE2D1P51668 147 aa8.26□□□□□ -1.09
SHC1-211ENST00000490667 RHEBQ15382 184 aa8.26□□□□□ -1.09
SHC1-211ENST00000490667 COX19Q49B96 90 aa8.26□□□□□ -1.09
SHC1-211ENST00000490667 C2orf88Q9BSF0 95 aa8.26□□□□□ -1.09
SHC1-211ENST00000490667 DMBT1Q9UGM3 2413 aaPredicted RBP8.26□□□□□ -1.09
SHC1-211ENST00000490667 NDUFA1O15239 70 aa8.25□□□□□ -1.09
SHC1-211ENST00000490667 LINC00173Q6ZV60 143 aa8.25□□□□□ -1.09
SHC1-211ENST00000490667 ALKBH7Q9BT30 221 aaPredicted RBP8.25□□□□□ -1.09
SHC1-211ENST00000490667 MRPL35Q9NZE8 188 aaKnown RBP8.25□□□□□ -1.09
SHC1-211ENST00000490667 RPL18AQ02543 176 aaKnown RBP8.24□□□□□ -1.09
SHC1-211ENST00000490667 FABP9Q0Z7S8 132 aa8.24□□□□□ -1.09
SHC1-211ENST00000490667 KIAA0087Q14695 138 aa8.24□□□□□ -1.09
SHC1-211ENST00000490667 PAPPA-AS1Q5QFB9 102 aa8.24□□□□□ -1.09
SHC1-211ENST00000490667 C10orf25Q5T742 122 aa8.24□□□□□ -1.09
SHC1-211ENST00000490667 UNQ6190/PRO20217Q6UXQ8 127 aa8.24□□□□□ -1.09
SHC1-211ENST00000490667 TOMM6Q96B49 74 aa8.24□□□□□ -1.09
SHC1-211ENST00000490667 A0A1W2PNN7 141 aa8.23□□□□□ -1.09
SHC1-211ENST00000490667 MT-ND6P03923 174 aa8.23□□□□□ -1.09
SHC1-211ENST00000490667 LINC01561Q8N1V8 128 aa8.23□□□□□ -1.09
SHC1-211ENST00000490667 SCGB3A1Q96QR1 104 aa8.23□□□□□ -1.09
SHC1-211ENST00000490667 TIMM17AQ99595 171 aa8.23□□□□□ -1.09
SHC1-211ENST00000490667 MRPL18Q9H0U6 180 aaKnown RBP8.23□□□□□ -1.09
SHC1-211ENST00000490667 ERASQ7Z444 233 aa8.22□□□□□ -1.09
SHC1-211ENST00000490667 FAM19A3Q7Z5A8 133 aa8.22□□□□□ -1.09
SHC1-211ENST00000490667 LINC01546A6NGU7 62 aa8.21□□□□□ -1.1
SHC1-211ENST00000490667 APOC3P02656 99 aa8.21□□□□□ -1.1
SHC1-211ENST00000490667 PRR3P79522 188 aaKnown RBP8.21□□□□□ -1.1
SHC1-211ENST00000490667 C9orf116Q5BN46 136 aaPredicted RBP8.21□□□□□ -1.1
SHC1-211ENST00000490667 C6orf48Q9UBA6 75 aa8.21□□□□□ -1.1
SHC1-211ENST00000490667 TLX1NBP0CAT3 122 aa8.2□□□□□ -1.1
SHC1-211ENST00000490667 SEC11AP67812 179 aa8.2□□□□□ -1.1
SHC1-211ENST00000490667 FA2HQ7L5A8 372 aa8.2□□□□□ -1.1
SHC1-211ENST00000490667 LINC01549A6NIU2 74 aa8.19□□□□□ -1.1
SHC1-211ENST00000490667 HERVK_113P63121 156 aa8.19□□□□□ -1.1
SHC1-211ENST00000490667 NDUFA5Q16718 116 aa8.19□□□□□ -1.1
SHC1-211ENST00000490667 C2orf82Q6UX34 121 aa8.19□□□□□ -1.1
SHC1-211ENST00000490667 Q6ZRP5 223 aa8.19□□□□□ -1.1
SHC1-211ENST00000490667 GEMIN7Q9H840 131 aaKnown RBP8.19□□□□□ -1.1
SHC1-211ENST00000490667 SMCO4Q9NRQ5 59 aa8.19□□□□□ -1.1
SHC1-211ENST00000490667 TRAPPC1Q9Y5R8 145 aa8.19□□□□□ -1.1
SHC1-211ENST00000490667 LRP1Q07954 4544 aaKnown RBP8.18□□□□□ -1.1
SHC1-211ENST00000490667 TRBV30A0A0K0K1B3 111 aa8.18□□□□□ -1.1
SHC1-211ENST00000490667 SNAPINO95295 136 aa8.18□□□□□ -1.1
SHC1-211ENST00000490667 PRSS2P07478 247 aa8.18□□□□□ -1.1
SHC1-211ENST00000490667 C6orf226Q5I0X4 101 aa8.18□□□□□ -1.1
SHC1-211ENST00000490667 SVBPQ8N300 66 aa8.18□□□□□ -1.1
SHC1-211ENST00000490667 PACRGQ96M98 296 aaPredicted RBP8.18□□□□□ -1.1
SHC1-211ENST00000490667 TOMM7Q9P0U1 55 aa8.18□□□□□ -1.1
SHC1-211ENST00000490667 CDKN2A-AS1Q9UH64 79 aa8.18□□□□□ -1.1
SHC1-211ENST00000490667 GAGE2EQ4V326 116 aa8.17□□□□□ -1.1
SHC1-211ENST00000490667 CST9LQ9H4G1 147 aa8.17□□□□□ -1.1
SHC1-211ENST00000490667 GAGE2DQ9UEU5 116 aa8.17□□□□□ -1.1
SHC1-211ENST00000490667 PKHD1L1Q86WI1 4243 aa8.16□□□□□ -1.1
SHC1-211ENST00000490667 CKS1BP61024 79 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms