RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 PDCD11Q14690 1871 aaKnown RBP0.54□□□□□ -2.32
NF1-213ENST00000489712 ARHGEF5Q12774 1597 aa0.54□□□□□ -2.32
NF1-213ENST00000489712 TTC37Q6PGP7 1564 aa0.54□□□□□ -2.32
NF1-213ENST00000489712 TRBV6-1A0A0K0K1D8 114 aa0.54□□□□□ -2.32
NF1-213ENST00000489712 C7orf77A4D0Y5 90 aa0.54□□□□□ -2.32
NF1-213ENST00000489712 SYS1-DBNDD2H3BUS1 97 aa0.54□□□□□ -2.32
NF1-213ENST00000489712 SMIM11AP58511 58 aa0.54□□□□□ -2.32
NF1-213ENST00000489712 GNG2P59768 71 aa0.54□□□□□ -2.32
NF1-213ENST00000489712 SPRR4Q96PI1 79 aa0.54□□□□□ -2.32
NF1-213ENST00000489712 CADP27708 2225 aa0.54□□□□□ -2.32
NF1-213ENST00000489712 TROQ12816 1431 aaPredicted RBP0.54□□□□□ -2.32
NF1-213ENST00000489712 POLA1P09884 1462 aaPredicted RBP0.54□□□□□ -2.32
NF1-213ENST00000489712 PLEKHH2Q8IVE3 1493 aa0.54□□□□□ -2.32
NF1-213ENST00000489712 RAPGEF2Q9Y4G8 1499 aa0.54□□□□□ -2.32
NF1-213ENST00000489712 KCPQ6ZWJ8 1503 aa0.54□□□□□ -2.32
NF1-213ENST00000489712 ABCC2Q92887 1545 aa0.54□□□□□ -2.32
NF1-213ENST00000489712 LRP6O75581 1613 aa0.53□□□□□ -2.32
NF1-213ENST00000489712 MYO7AQ13402 2215 aa0.53□□□□□ -2.32
NF1-213ENST00000489712 PLXNB2O15031 1838 aa0.53□□□□□ -2.32
NF1-213ENST00000489712 TRBV7-7A0A0K0K1E9 115 aa0.53□□□□□ -2.32
NF1-213ENST00000489712 H3BQF6 201 aa0.53□□□□□ -2.32
NF1-213ENST00000489712 C10orf113Q5VZT2 155 aa0.53□□□□□ -2.32
NF1-213ENST00000489712 SPINK6Q6UWN8 80 aa0.53□□□□□ -2.32
NF1-213ENST00000489712 LINC00846Q9NV44 126 aa0.53□□□□□ -2.32
NF1-213ENST00000489712 PRO0255Q9UI72 69 aa0.53□□□□□ -2.32
NF1-213ENST00000489712 CLTCQ00610 1675 aaKnown RBP0.53□□□□□ -2.33
NF1-213ENST00000489712 SCN7AQ01118 1682 aa0.53□□□□□ -2.33
NF1-213ENST00000489712 JMJD1CQ15652 2540 aa0.53□□□□□ -2.33
NF1-213ENST00000489712 TENM3Q9P273 2699 aa0.52□□□□□ -2.33
NF1-213ENST00000489712 H7BZZ5 65 aa0.52□□□□□ -2.33
NF1-213ENST00000489712 BCE1O60756 84 aa0.52□□□□□ -2.33
NF1-213ENST00000489712 HMGN3Q15651 99 aa0.52□□□□□ -2.33
NF1-213ENST00000489712 PIGYQ3MUY2 71 aa0.52□□□□□ -2.33
NF1-213ENST00000489712 ADGRL2O95490 1459 aa0.52□□□□□ -2.33
NF1-213ENST00000489712 ARHGEF12Q9NZN5 1544 aa0.52□□□□□ -2.33
NF1-213ENST00000489712 NUP188Q5SRE5 1749 aa0.52□□□□□ -2.33
NF1-213ENST00000489712 MARF1Q9Y4F3 1742 aaKnown RBP0.52□□□□□ -2.33
NF1-213ENST00000489712 PVALEFA0A1B0GWK0 134 aa0.51□□□□□ -2.33
NF1-213ENST00000489712 GNGT1P63211 74 aa0.51□□□□□ -2.33
NF1-213ENST00000489712 ETDBQ3ZM63 59 aa0.51□□□□□ -2.33
NF1-213ENST00000489712 PYY3Q5JQD4 70 aa0.51□□□□□ -2.33
NF1-213ENST00000489712 ALKAL2Q6UX46 152 aa0.51□□□□□ -2.33
NF1-213ENST00000489712 ZNF462Q96JM2 2506 aa0.51□□□□□ -2.33
NF1-213ENST00000489712 LINC01600Q96MT4 127 aa0.51□□□□□ -2.33
NF1-213ENST00000489712 TP53AIP1Q9HCN2 124 aa0.51□□□□□ -2.33
NF1-213ENST00000489712 EPRSP07814 1512 aaKnown RBP0.5□□□□□ -2.33
NF1-213ENST00000489712 ATP10BO94823 1461 aa0.5□□□□□ -2.33
NF1-213ENST00000489712 C1orf167Q5SNV9 1468 aa0.5□□□□□ -2.33
NF1-213ENST00000489712 A0A087WVE0 104 aa0.5□□□□□ -2.33
NF1-213ENST00000489712 FXYD6-FXYD2A0A087WZ82 144 aa0.5□□□□□ -2.33
NF1-213ENST00000489712 TRBV7-4A0A0J9YYF1 115 aa0.5□□□□□ -2.33
NF1-213ENST00000489712 LEPROTL1O95214 131 aa0.5□□□□□ -2.33
NF1-213ENST00000489712 ARMS2P0C7Q2 107 aa0.5□□□□□ -2.33
NF1-213ENST00000489712 PEA15Q15121 130 aa0.5□□□□□ -2.33
NF1-213ENST00000489712 Q8IZM0 81 aa0.5□□□□□ -2.33
NF1-213ENST00000489712 LCN9Q8WX39 176 aa0.5□□□□□ -2.33
NF1-213ENST00000489712 COL4A6Q14031 1691 aa0.49□□□□□ -2.33
NF1-213ENST00000489712 FANCAO15360 1455 aa0.49□□□□□ -2.33
NF1-213ENST00000489712 C10orf142B7Z368 130 aa0.49□□□□□ -2.33
NF1-213ENST00000489712 D6R8Y8 96 aa0.49□□□□□ -2.33
NF1-213ENST00000489712 H0Y9P7 68 aa0.49□□□□□ -2.33
NF1-213ENST00000489712 KRTAP19-3Q7Z4W3 81 aa0.49□□□□□ -2.33
NF1-213ENST00000489712 MUSTN1Q8IVN3 82 aa0.49□□□□□ -2.33
NF1-213ENST00000489712 MYO7BQ6PIF6 2116 aa0.49□□□□□ -2.33
NF1-213ENST00000489712 RB1CC1Q8TDY2 1594 aa0.49□□□□□ -2.33
NF1-213ENST00000489712 FBN2P35556 2912 aa0.48□□□□□ -2.33
NF1-213ENST00000489712 A0A1B0GU69 56 aa0.48□□□□□ -2.33
NF1-213ENST00000489712 F8WEM9 126 aa0.48□□□□□ -2.33
NF1-213ENST00000489712 CYB5AP00167 134 aa0.48□□□□□ -2.33
NF1-213ENST00000489712 CFDP00746 253 aaPredicted RBP0.48□□□□□ -2.33
NF1-213ENST00000489712 DEFB107AQ8IZN7 70 aa0.48□□□□□ -2.33
NF1-213ENST00000489712 RABAC1Q9UI14 185 aa0.48□□□□□ -2.33
NF1-213ENST00000489712 MEGF8Q7Z7M0 2845 aa0.48□□□□□ -2.33
NF1-213ENST00000489712 SETBP1Q9Y6X0 1596 aa0.48□□□□□ -2.33
NF1-213ENST00000489712 ABCC3O15438 1527 aa0.48□□□□□ -2.33
NF1-213ENST00000489712 IQSEC2Q5JU85 1478 aa0.48□□□□□ -2.33
NF1-213ENST00000489712 EDC4Q6P2E9 1401 aaKnown RBP0.47□□□□□ -2.33
NF1-213ENST00000489712 RGPD4Q7Z3J3 1758 aa0.47□□□□□ -2.33
NF1-213ENST00000489712 KNDC1Q76NI1 1749 aa0.47□□□□□ -2.33
NF1-213ENST00000489712 XRN1Q8IZH2 1706 aaKnown RBP0.47□□□□□ -2.33
NF1-213ENST00000489712 PLIN4Q96Q06 1357 aa0.47□□□□□ -2.33
NF1-213ENST00000489712 NOTCH1P46531 2555 aa0.47□□□□□ -2.33
NF1-213ENST00000489712 K7EP34 96 aa0.47□□□□□ -2.33
NF1-213ENST00000489712 SPINK1P00995 79 aa0.47□□□□□ -2.33
NF1-213ENST00000489712 Q5BKY6 102 aa0.47□□□□□ -2.33
NF1-213ENST00000489712 S100A16Q96FQ6 103 aaKnown RBP0.47□□□□□ -2.33
NF1-213ENST00000489712 USMG5Q96IX5 58 aa0.47□□□□□ -2.33
NF1-213ENST00000489712 C20orf78Q9BR46 151 aa0.47□□□□□ -2.33
NF1-213ENST00000489712 ASXL3Q9C0F0 2248 aa0.47□□□□□ -2.33
NF1-213ENST00000489712 CCDC141Q6ZP82 1450 aa0.47□□□□□ -2.33
NF1-213ENST00000489712 NLRP1Q9C000 1473 aa0.47□□□□□ -2.33
NF1-213ENST00000489712 A0A0G2JMZ2 1700 aa0.47□□□□□ -2.33
NF1-213ENST00000489712 MON2Q7Z3U7 1717 aa0.47□□□□□ -2.33
NF1-213ENST00000489712 KIAA1551Q9HCM1 1747 aa0.47□□□□□ -2.33
NF1-213ENST00000489712 C6orf201Q7Z4U5 140 aa0.46□□□□□ -2.34
NF1-213ENST00000489712 C9orf62Q8N4C0 152 aa0.46□□□□□ -2.34
NF1-213ENST00000489712 PSENENQ9NZ42 101 aa0.46□□□□□ -2.34
NF1-213ENST00000489712 HIGD1BQ9P298 99 aa0.46□□□□□ -2.34
NF1-213ENST00000489712 RGPD3A6NKT7 1758 aaPredicted RBP0.46□□□□□ -2.34
NF1-213ENST00000489712 CACNA1CQ13936 2221 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms