RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 LINC00526Q96FQ7 95 aa7.33□□□□□ -1.24
ACTN4-206ENST00000489451 LINC01600Q96MT4 127 aa7.33□□□□□ -1.24
ACTN4-206ENST00000489451 SEC11CQ9BY50 192 aa7.33□□□□□ -1.24
ACTN4-206ENST00000489451 SPANXA1Q9NS26 97 aa7.33□□□□□ -1.24
ACTN4-206ENST00000489451 TRAV13-1A0A0B4J241 112 aa7.32□□□□□ -1.24
ACTN4-206ENST00000489451 IGHV1-58A0A0C4DH39 117 aa7.32□□□□□ -1.24
ACTN4-206ENST00000489451 MALP21145 153 aa7.32□□□□□ -1.24
ACTN4-206ENST00000489451 S100PP25815 95 aa7.32□□□□□ -1.24
ACTN4-206ENST00000489451 STPG4Q8N801 248 aa7.32□□□□□ -1.24
ACTN4-206ENST00000489451 MAP1LC3AQ9H492 121 aa7.32□□□□□ -1.24
ACTN4-206ENST00000489451 TRAV9-1A0A075B6T8 112 aa7.31□□□□□ -1.24
ACTN4-206ENST00000489451 ZNF561-AS1K7EIQ3 104 aa7.31□□□□□ -1.24
ACTN4-206ENST00000489451 C7orf33Q8WU49 177 aa7.31□□□□□ -1.24
ACTN4-206ENST00000489451 PKIGQ9Y2B9 76 aa7.31□□□□□ -1.24
ACTN4-206ENST00000489451 LOC389332A0A1B0GUA5 103 aa7.3□□□□□ -1.24
ACTN4-206ENST00000489451 PRSS47A8MTI9 375 aa7.3□□□□□ -1.24
ACTN4-206ENST00000489451 COX7A2LO14548 114 aa7.3□□□□□ -1.24
ACTN4-206ENST00000489451 GHRHP01286 108 aa7.3□□□□□ -1.24
ACTN4-206ENST00000489451 ADCYAP1P18509 176 aa7.3□□□□□ -1.24
ACTN4-206ENST00000489451 IFI27P40305 119 aaPredicted RBP7.3□□□□□ -1.24
ACTN4-206ENST00000489451 KRTAP10-8P60410 259 aa7.3□□□□□ -1.24
ACTN4-206ENST00000489451 RPL39P62891 51 aaKnown RBP7.3□□□□□ -1.24
ACTN4-206ENST00000489451 FAT4Q6V0I7 4981 aa7.3□□□□□ -1.24
ACTN4-206ENST00000489451 K7EMI3 77 aa7.29□□□□□ -1.24
ACTN4-206ENST00000489451 APOMO95445 188 aa7.29□□□□□ -1.24
ACTN4-206ENST00000489451 G0S2P27469 103 aa7.29□□□□□ -1.24
ACTN4-206ENST00000489451 MRPS36P82909 103 aaKnown RBP7.29□□□□□ -1.24
ACTN4-206ENST00000489451 SRSF9Q13242 221 aaKnown RBP eCLIP7.29□□□□□ -1.24
ACTN4-206ENST00000489451 RNASE13Q5GAN3 156 aaKnown RBP7.29□□□□□ -1.24
ACTN4-206ENST00000489451 Q6ZUT4 128 aa7.29□□□□□ -1.24
ACTN4-206ENST00000489451 A0A0J9YXV3 536 aa7.28□□□□□ -1.24
ACTN4-206ENST00000489451 ORMDL2Q53FV1 153 aa7.28□□□□□ -1.24
ACTN4-206ENST00000489451 Q8N8P6 123 aa7.28□□□□□ -1.24
ACTN4-206ENST00000489451 NXT2Q9NPJ8 142 aaKnown RBP7.28□□□□□ -1.24
ACTN4-206ENST00000489451 IFITM10A6NMD0 228 aa7.27□□□□□ -1.25
ACTN4-206ENST00000489451 RHEBQ15382 184 aa7.27□□□□□ -1.25
ACTN4-206ENST00000489451 COX19Q49B96 90 aa7.27□□□□□ -1.25
ACTN4-206ENST00000489451 CARD19Q96LW7 228 aa7.27□□□□□ -1.25
ACTN4-206ENST00000489451 LINC00474Q9P2X8 69 aa7.27□□□□□ -1.25
ACTN4-206ENST00000489451 CYSLTR1Q9Y271 337 aa7.27□□□□□ -1.25
ACTN4-206ENST00000489451 PYGO1Q9Y3Y4 419 aa7.27□□□□□ -1.25
ACTN4-206ENST00000489451 LPAP08519 4548 aa7.26□□□□□ -1.25
ACTN4-206ENST00000489451 SYCNQ0VAF6 134 aa7.26□□□□□ -1.25
ACTN4-206ENST00000489451 Q6ZN92 141 aa7.26□□□□□ -1.25
ACTN4-206ENST00000489451 GNB1LQ9BYB4 327 aa7.26□□□□□ -1.25
ACTN4-206ENST00000489451 RPS10P5Q9NQ39 176 aa7.26□□□□□ -1.25
ACTN4-206ENST00000489451 PTTG1IPP53801 180 aa7.25□□□□□ -1.25
ACTN4-206ENST00000489451 NDUFA5Q16718 116 aa7.25□□□□□ -1.25
ACTN4-206ENST00000489451 C10orf91Q5T1B1 145 aa7.25□□□□□ -1.25
ACTN4-206ENST00000489451 SPINK6Q6UWN8 80 aa7.25□□□□□ -1.25
ACTN4-206ENST00000489451 TEX43Q6ZNM6 134 aa7.25□□□□□ -1.25
ACTN4-206ENST00000489451 C5orf38Q86SI9 138 aa7.25□□□□□ -1.25
ACTN4-206ENST00000489451 TMEM141Q96I45 108 aa7.25□□□□□ -1.25
ACTN4-206ENST00000489451 OPRPNQ99935 248 aaPredicted RBP7.25□□□□□ -1.25
ACTN4-206ENST00000489451 C2orf88Q9BSF0 95 aa7.25□□□□□ -1.25
ACTN4-206ENST00000489451 CARHSP1Q9Y2V2 147 aaKnown RBP7.25□□□□□ -1.25
ACTN4-206ENST00000489451 IGLV4-69A0A075B6H9 119 aa7.24□□□□□ -1.25
ACTN4-206ENST00000489451 TGIF2-C20orf24A0A0A6YYL0 155 aa7.24□□□□□ -1.25
ACTN4-206ENST00000489451 A0A0U1RQV1 116 aa7.24□□□□□ -1.25
ACTN4-206ENST00000489451 A0A1W2PNN7 141 aa7.24□□□□□ -1.25
ACTN4-206ENST00000489451 MT-ND6P03923 174 aa7.24□□□□□ -1.25
ACTN4-206ENST00000489451 NPSP0C0P6 89 aa7.24□□□□□ -1.25
ACTN4-206ENST00000489451 PAPPA-AS1Q5QFB9 102 aa7.24□□□□□ -1.25
ACTN4-206ENST00000489451 C2orf66Q6UXQ4 117 aa7.24□□□□□ -1.25
ACTN4-206ENST00000489451 CAMK2N2Q96S95 79 aa7.24□□□□□ -1.25
ACTN4-206ENST00000489451 VCX2Q9H322 139 aa7.24□□□□□ -1.25
ACTN4-206ENST00000489451 KIAA1644Q3SXP7 199 aa7.23□□□□□ -1.25
ACTN4-206ENST00000489451 OR10D4PQ8NGN7 298 aa7.23□□□□□ -1.25
ACTN4-206ENST00000489451 C2orf48Q96LS8 159 aa7.23□□□□□ -1.25
ACTN4-206ENST00000489451 IGLV4-3A0A075B6K6 122 aa7.22□□□□□ -1.25
ACTN4-206ENST00000489451 IGHV3OR16-9A0A0B4J2B5 98 aa7.22□□□□□ -1.25
ACTN4-206ENST00000489451 F8WDY8 70 aa7.22□□□□□ -1.25
ACTN4-206ENST00000489451 SPAG11BQ08648 103 aa7.22□□□□□ -1.25
ACTN4-206ENST00000489451 Q6ZRP5 223 aa7.22□□□□□ -1.25
ACTN4-206ENST00000489451 SVBPQ8N300 66 aa7.22□□□□□ -1.25
ACTN4-206ENST00000489451 FAM104AQ969W3 186 aa7.22□□□□□ -1.25
ACTN4-206ENST00000489451 LOC107984640A0A0U1RRK4 108 aa7.21□□□□□ -1.26
ACTN4-206ENST00000489451 LINC01549A6NIU2 74 aa7.21□□□□□ -1.26
ACTN4-206ENST00000489451 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.21□□□□□ -1.26
ACTN4-206ENST00000489451 SNAPINO95295 136 aa7.21□□□□□ -1.26
ACTN4-206ENST00000489451 APOC3P02656 99 aa7.21□□□□□ -1.26
ACTN4-206ENST00000489451 FABP9Q0Z7S8 132 aa7.21□□□□□ -1.26
ACTN4-206ENST00000489451 ORAOV1Q8WV07 137 aa7.21□□□□□ -1.26
ACTN4-206ENST00000489451 MUC2Q02817 5179 aa7.21□□□□□ -1.26
ACTN4-206ENST00000489451 SEC11AP67812 179 aa7.2□□□□□ -1.26
ACTN4-206ENST00000489451 GAGE2BQ13066 116 aa7.2□□□□□ -1.26
ACTN4-206ENST00000489451 REG3GQ6UW15 175 aa7.2□□□□□ -1.26
ACTN4-206ENST00000489451 ALKBH7Q9BT30 221 aaPredicted RBP7.2□□□□□ -1.26
ACTN4-206ENST00000489451 MRPL18Q9H0U6 180 aaKnown RBP7.2□□□□□ -1.26
ACTN4-206ENST00000489451 A0A087WZ39 114 aa7.19□□□□□ -1.26
ACTN4-206ENST00000489451 IGIPA6NJ69 53 aa7.19□□□□□ -1.26
ACTN4-206ENST00000489451 NDUFA1O15239 70 aa7.19□□□□□ -1.26
ACTN4-206ENST00000489451 LINC00242Q5T6M2 205 aa7.19□□□□□ -1.26
ACTN4-206ENST00000489451 FA2HQ7L5A8 372 aa7.19□□□□□ -1.26
ACTN4-206ENST00000489451 KRTAP11-1Q8IUC1 163 aa7.19□□□□□ -1.26
ACTN4-206ENST00000489451 TOMM6Q96B49 74 aa7.19□□□□□ -1.26
ACTN4-206ENST00000489451 SCGB3A1Q96QR1 104 aa7.19□□□□□ -1.26
ACTN4-206ENST00000489451 TIMM17AQ99595 171 aa7.19□□□□□ -1.26
ACTN4-206ENST00000489451 SMCO4Q9NRQ5 59 aa7.19□□□□□ -1.26
ACTN4-206ENST00000489451 PSORS1C2Q9UIG4 136 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms