RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 Q9H8V8 135 aa10.09□□□□□ -0.79
ABCB1-207ENST00000488737 GAGE7O76087 117 aa10.08□□□□□ -0.8
ABCB1-207ENST00000488737 GAGE12FP0CL80 117 aa10.08□□□□□ -0.8
ABCB1-207ENST00000488737 GAGE12GP0CL81 117 aa10.08□□□□□ -0.8
ABCB1-207ENST00000488737 GAGE12IP0CL82 117 aa10.08□□□□□ -0.8
ABCB1-207ENST00000488737 CDIP1Q9H305 208 aa10.08□□□□□ -0.8
ABCB1-207ENST00000488737 PPDPFQ9H3Y8 114 aa10.08□□□□□ -0.8
ABCB1-207ENST00000488737 HIVEP1P15822 2718 aa10.08□□□□□ -0.8
ABCB1-207ENST00000488737 TRAV13-1A0A0B4J241 112 aa10.08□□□□□ -0.8
ABCB1-207ENST00000488737 F5H768 121 aa10.08□□□□□ -0.8
ABCB1-207ENST00000488737 HERV-K104P63124 156 aa10.08□□□□□ -0.8
ABCB1-207ENST00000488737 SMR3AQ99954 134 aa10.08□□□□□ -0.8
ABCB1-207ENST00000488737 TRBV10-2A0A0K0K1G8 114 aa10.07□□□□□ -0.8
ABCB1-207ENST00000488737 LINC00308Q8TCZ7 52 aa10.07□□□□□ -0.8
ABCB1-207ENST00000488737 ZNF625Q96I27 306 aaPredicted RBP10.07□□□□□ -0.8
ABCB1-207ENST00000488737 MTORP42345 2549 aa10.07□□□□□ -0.8
ABCB1-207ENST00000488737 NPC2P61916 151 aa10.06□□□□□ -0.8
ABCB1-207ENST00000488737 TRGV4A0A0C4DH28 118 aa10.06□□□□□ -0.8
ABCB1-207ENST00000488737 CYSRT1A8MQ03 144 aa10.06□□□□□ -0.8
ABCB1-207ENST00000488737 TMEM262E9PQX1 116 aa10.06□□□□□ -0.8
ABCB1-207ENST00000488737 RPL13AP40429 203 aaKnown RBP10.06□□□□□ -0.8
ABCB1-207ENST00000488737 HIVEP2P31629 2446 aa10.05□□□□□ -0.8
ABCB1-207ENST00000488737 FHL2Q14192 279 aa10.04□□□□□ -0.8
ABCB1-207ENST00000488737 PRIMA1Q86XR5 153 aa10.04□□□□□ -0.8
ABCB1-207ENST00000488737 DAND5Q8N907 189 aa10.04□□□□□ -0.8
ABCB1-207ENST00000488737 F8P00451 2351 aa10.04□□□□□ -0.8
ABCB1-207ENST00000488737 H3BT86 120 aa10.04□□□□□ -0.8
ABCB1-207ENST00000488737 LST1O00453 97 aa10.04□□□□□ -0.8
ABCB1-207ENST00000488737 NOTCH3Q9UM47 2321 aa10.03□□□□□ -0.8
ABCB1-207ENST00000488737 LOC100131303A0A0U1RQF7 123 aa10.03□□□□□ -0.8
ABCB1-207ENST00000488737 JMJD1CQ15652 2540 aa10.03□□□□□ -0.8
ABCB1-207ENST00000488737 TRBV6-8A0A0A6YYG3 113 aa10.02□□□□□ -0.8
ABCB1-207ENST00000488737 LY6G6DO95868 133 aa10.02□□□□□ -0.8
ABCB1-207ENST00000488737 KIR2DL5BQ8NHK3 375 aa10.02□□□□□ -0.8
ABCB1-207ENST00000488737 MEIG1Q5JSS6 88 aa10.02□□□□□ -0.81
ABCB1-207ENST00000488737 NSD1Q96L73 2696 aaPredicted RBP10.02□□□□□ -0.81
ABCB1-207ENST00000488737 LINC00612Q8N6U2 182 aa10.01□□□□□ -0.81
ABCB1-207ENST00000488737 NTN5Q8WTR8 489 aaPredicted RBP10.01□□□□□ -0.81
ABCB1-207ENST00000488737 SETD2Q9BYW2 2564 aaPredicted RBP10.01□□□□□ -0.81
ABCB1-207ENST00000488737 C2orf82Q6UX34 121 aa10□□□□□ -0.81
ABCB1-207ENST00000488737 LINC00482Q8N8I6 264 aa10□□□□□ -0.81
ABCB1-207ENST00000488737 CUBNO60494 3623 aa10□□□□□ -0.81
ABCB1-207ENST00000488737 PF4P02776 101 aa10□□□□□ -0.81
ABCB1-207ENST00000488737 GAGE6Q13070 117 aa10□□□□□ -0.81
ABCB1-207ENST00000488737 SOSTDC1Q6X4U4 206 aa10□□□□□ -0.81
ABCB1-207ENST00000488737 XGP55808 180 aa9.99□□□□□ -0.81
ABCB1-207ENST00000488737 COX7B2Q8TF08 81 aa9.99□□□□□ -0.81
ABCB1-207ENST00000488737 CLEC2BQ92478 149 aa9.99□□□□□ -0.81
ABCB1-207ENST00000488737 UBE2WQ96B02 151 aa9.99□□□□□ -0.81
ABCB1-207ENST00000488737 SHISA2Q6UWI4 295 aa9.98□□□□□ -0.81
ABCB1-207ENST00000488737 SMIM9A6NGZ8 99 aa9.98□□□□□ -0.81
ABCB1-207ENST00000488737 MT-ATP8P03928 68 aa9.98□□□□□ -0.81
ABCB1-207ENST00000488737 KRTAP10-3P60369 221 aa9.98□□□□□ -0.81
ABCB1-207ENST00000488737 CHCHD5Q9BSY4 110 aa9.98□□□□□ -0.81
ABCB1-207ENST00000488737 MAST4O15021 2626 aa9.97□□□□□ -0.81
ABCB1-207ENST00000488737 IGLV4-60A0A075B6I1 120 aa9.97□□□□□ -0.81
ABCB1-207ENST00000488737 A0A0U1RRA0 63 aa9.97□□□□□ -0.81
ABCB1-207ENST00000488737 COX7A2LO14548 114 aa9.97□□□□□ -0.81
ABCB1-207ENST00000488737 C2CD3Q4AC94 2353 aa9.97□□□□□ -0.81
ABCB1-207ENST00000488737 IGHV3OR16-9A0A0B4J2B5 98 aa9.96□□□□□ -0.81
ABCB1-207ENST00000488737 CRLF1O75462 422 aa9.96□□□□□ -0.81
ABCB1-207ENST00000488737 TEX49A0A1B0GTD5 131 aa9.96□□□□□ -0.82
ABCB1-207ENST00000488737 FAM222AQ5U5X8 452 aa9.96□□□□□ -0.82
ABCB1-207ENST00000488737 TEP1Q99973 2627 aaKnown RBP9.95□□□□□ -0.82
ABCB1-207ENST00000488737 A0A087WZ39 114 aa9.95□□□□□ -0.82
ABCB1-207ENST00000488737 A0A1B0GV72 72 aa9.95□□□□□ -0.82
ABCB1-207ENST00000488737 INAFM1C9JVW0 142 aa9.95□□□□□ -0.82
ABCB1-207ENST00000488737 DEFB121Q5J5C9 76 aa9.95□□□□□ -0.82
ABCB1-207ENST00000488737 FN1P02751 2386 aaKnown RBP9.94□□□□□ -0.82
ABCB1-207ENST00000488737 X6R8D5 127 aa9.94□□□□□ -0.82
ABCB1-207ENST00000488737 NIPBLQ6KC79 2804 aaeCLIP9.94□□□□□ -0.82
ABCB1-207ENST00000488737 TRAV13-2A0A0B4J235 113 aa9.93□□□□□ -0.82
ABCB1-207ENST00000488737 TRAV8-4A0A0B4J246 113 aa9.93□□□□□ -0.82
ABCB1-207ENST00000488737 DEFB130BP0DP73 79 aa9.93□□□□□ -0.82
ABCB1-207ENST00000488737 DEFB130AP0DP74 79 aa9.93□□□□□ -0.82
ABCB1-207ENST00000488737 A0A1B0GUV1 79 aa9.93□□□□□ -0.82
ABCB1-207ENST00000488737 TRACP01848 142 aa9.92□□□□□ -0.82
ABCB1-207ENST00000488737 GYPEP15421 78 aa9.92□□□□□ -0.82
ABCB1-207ENST00000488737 C9orf66Q5T8R8 295 aa9.92□□□□□ -0.82
ABCB1-207ENST00000488737 IGKV3OR2-268A0A0C4DH90 116 aa9.91□□□□□ -0.82
ABCB1-207ENST00000488737 LINC00959A0A1B0GUT2 108 aa9.91□□□□□ -0.82
ABCB1-207ENST00000488737 IBA57-AS1B1ANH7 110 aa9.91□□□□□ -0.82
ABCB1-207ENST00000488737 MIR7-3HGQ8N6C7 128 aa9.91□□□□□ -0.82
ABCB1-207ENST00000488737 TOMM7Q9P0U1 55 aa9.91□□□□□ -0.82
ABCB1-207ENST00000488737 PRO0255Q9UI72 69 aa9.91□□□□□ -0.82
ABCB1-207ENST00000488737 FAM240AA0A1B0GVK7 77 aa9.91□□□□□ -0.82
ABCB1-207ENST00000488737 LYRM9A8MSI8 78 aa9.91□□□□□ -0.82
ABCB1-207ENST00000488737 CRPP02741 224 aa9.9□□□□□ -0.82
ABCB1-207ENST00000488737 CKS1BP61024 79 aa9.9□□□□□ -0.82
ABCB1-207ENST00000488737 LINC01561Q8N1V8 128 aa9.9□□□□□ -0.82
ABCB1-207ENST00000488737 CITED1Q99966 193 aa9.9□□□□□ -0.82
ABCB1-207ENST00000488737 RPL28P46779 137 aaKnown RBP9.89□□□□□ -0.83
ABCB1-207ENST00000488737 LINC00158P58513 81 aa9.89□□□□□ -0.83
ABCB1-207ENST00000488737 MRPL23Q16540 153 aaKnown RBP9.89□□□□□ -0.83
ABCB1-207ENST00000488737 SND1-IT1Q9HBX3 110 aa9.89□□□□□ -0.83
ABCB1-207ENST00000488737 SS18Q15532 418 aa9.88□□□□□ -0.83
ABCB1-207ENST00000488737 SNCGO76070 127 aa9.87□□□□□ -0.83
ABCB1-207ENST00000488737 C5orf38Q86SI9 138 aa9.87□□□□□ -0.83
ABCB1-207ENST00000488737 TRAV26-1A0A087WT03 109 aa9.87□□□□□ -0.83
ABCB1-207ENST00000488737 LINC00337Q8N6G1 96 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms