RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 IFT172Q9UG01 1749 aa0.78□□□□□ -2.29
HMGB1P36-201ENST00000487709 PLXNA1Q9UIW2 1896 aa0.78□□□□□ -2.29
HMGB1P36-201ENST00000487709 CITO14578 2027 aa0.77□□□□□ -2.29
HMGB1P36-201ENST00000487709 H3BQF6 201 aa0.77□□□□□ -2.29
HMGB1P36-201ENST00000487709 ALKAL2Q6UX46 152 aa0.77□□□□□ -2.29
HMGB1P36-201ENST00000487709 FDCSPQ8NFU4 85 aa0.77□□□□□ -2.29
HMGB1P36-201ENST00000487709 DCAF1Q9Y4B6 1507 aa0.77□□□□□ -2.29
HMGB1P36-201ENST00000487709 KIAA1551Q9HCM1 1747 aa0.77□□□□□ -2.29
HMGB1P36-201ENST00000487709 MYH8P13535 1937 aa0.77□□□□□ -2.29
HMGB1P36-201ENST00000487709 KIAA0100Q14667 2235 aaKnown RBP0.77□□□□□ -2.29
HMGB1P36-201ENST00000487709 ABCA4P78363 2273 aa0.76□□□□□ -2.29
HMGB1P36-201ENST00000487709 LAMA4Q16363 1823 aa0.76□□□□□ -2.29
HMGB1P36-201ENST00000487709 DOCK2Q92608 1830 aa0.76□□□□□ -2.29
HMGB1P36-201ENST00000487709 ARFGEF1Q9Y6D6 1849 aa0.76□□□□□ -2.29
HMGB1P36-201ENST00000487709 LRRC37A2A6NM11 1700 aa0.76□□□□□ -2.29
HMGB1P36-201ENST00000487709 RAPGEF6Q8TEU7 1601 aa0.76□□□□□ -2.29
HMGB1P36-201ENST00000487709 NRXN1Q9ULB1 1477 aa0.76□□□□□ -2.29
HMGB1P36-201ENST00000487709 A0A087WVE0 104 aa0.76□□□□□ -2.29
HMGB1P36-201ENST00000487709 TRBV6-1A0A0K0K1D8 114 aa0.76□□□□□ -2.29
HMGB1P36-201ENST00000487709 F8WEM9 126 aa0.76□□□□□ -2.29
HMGB1P36-201ENST00000487709 LEPROTL1O95214 131 aa0.76□□□□□ -2.29
HMGB1P36-201ENST00000487709 HMGN2P05204 90 aaKnown RBP0.76□□□□□ -2.29
HMGB1P36-201ENST00000487709 SNRPFP62306 86 aaKnown RBP0.76□□□□□ -2.29
HMGB1P36-201ENST00000487709 C10orf113Q5VZT2 155 aa0.76□□□□□ -2.29
HMGB1P36-201ENST00000487709 C10orf95Q9H7T3 257 aa0.76□□□□□ -2.29
HMGB1P36-201ENST00000487709 LOC285556D6RIA3 1793 aa0.75□□□□□ -2.29
HMGB1P36-201ENST00000487709 CLTCQ00610 1675 aaKnown RBP0.75□□□□□ -2.29
HMGB1P36-201ENST00000487709 COL4A6Q14031 1691 aa0.75□□□□□ -2.29
HMGB1P36-201ENST00000487709 NLRP1Q9C000 1473 aa0.75□□□□□ -2.29
HMGB1P36-201ENST00000487709 ARHGAP35Q9NRY4 1499 aa0.75□□□□□ -2.29
HMGB1P36-201ENST00000487709 A0A0D9SG42 100 aa0.75□□□□□ -2.29
HMGB1P36-201ENST00000487709 KANTRA0A1W2PQU2 76 aa0.75□□□□□ -2.29
HMGB1P36-201ENST00000487709 D6R8Y8 96 aa0.75□□□□□ -2.29
HMGB1P36-201ENST00000487709 ACYP1P07311 99 aa0.75□□□□□ -2.29
HMGB1P36-201ENST00000487709 ADIRFQ15847 76 aa0.75□□□□□ -2.29
HMGB1P36-201ENST00000487709 SPATA8Q6RVD6 105 aa0.75□□□□□ -2.29
HMGB1P36-201ENST00000487709 MUSTN1Q8IVN3 82 aa0.75□□□□□ -2.29
HMGB1P36-201ENST00000487709 PSENENQ9NZ42 101 aa0.75□□□□□ -2.29
HMGB1P36-201ENST00000487709 SPCS1Q9Y6A9 102 aa0.75□□□□□ -2.29
HMGB1P36-201ENST00000487709 AHNAK2Q8IVF2 5795 aa0.75□□□□□ -2.29
HMGB1P36-201ENST00000487709 MAGI2Q86UL8 1455 aa0.74□□□□□ -2.29
HMGB1P36-201ENST00000487709 A0A0D9SFI3 127 aa0.74□□□□□ -2.29
HMGB1P36-201ENST00000487709 GNGT1P63211 74 aa0.74□□□□□ -2.29
HMGB1P36-201ENST00000487709 TDRG1Q3Y452 100 aa0.74□□□□□ -2.29
HMGB1P36-201ENST00000487709 SSBP3-AS1Q7Z2R9 100 aa0.74□□□□□ -2.29
HMGB1P36-201ENST00000487709 LINC00643Q86TS7 51 aa0.74□□□□□ -2.29
HMGB1P36-201ENST00000487709 LINC01600Q96MT4 127 aa0.74□□□□□ -2.29
HMGB1P36-201ENST00000487709 MON2Q7Z3U7 1717 aa0.74□□□□□ -2.29
HMGB1P36-201ENST00000487709 ESPL1Q14674 2120 aa0.74□□□□□ -2.29
HMGB1P36-201ENST00000487709 POLA1P09884 1462 aaPredicted RBP0.73□□□□□ -2.29
HMGB1P36-201ENST00000487709 TANC1Q9C0D5 1861 aa0.73□□□□□ -2.29
HMGB1P36-201ENST00000487709 H0Y9P7 68 aa0.73□□□□□ -2.29
HMGB1P36-201ENST00000487709 COX6A2Q02221 97 aa0.73□□□□□ -2.29
HMGB1P36-201ENST00000487709 DEFB107AQ8IZN7 70 aa0.73□□□□□ -2.29
HMGB1P36-201ENST00000487709 ST20Q9HBF5 79 aa0.73□□□□□ -2.29
HMGB1P36-201ENST00000487709 ERCC6L2Q5T890 1561 aa0.73□□□□□ -2.29
HMGB1P36-201ENST00000487709 MAP2P11137 1827 aaKnown RBP0.73□□□□□ -2.29
HMGB1P36-201ENST00000487709 PSME4Q14997 1843 aa0.73□□□□□ -2.29
HMGB1P36-201ENST00000487709 C1orf167Q5SNV9 1468 aa0.73□□□□□ -2.29
HMGB1P36-201ENST00000487709 TENM3Q9P273 2699 aa0.72□□□□□ -2.29
HMGB1P36-201ENST00000487709 MYO3AQ8NEV4 1616 aa0.72□□□□□ -2.29
HMGB1P36-201ENST00000487709 SPINK7P58062 85 aa0.72□□□□□ -2.29
HMGB1P36-201ENST00000487709 NMSQ5H8A3 153 aa0.72□□□□□ -2.29
HMGB1P36-201ENST00000487709 FAM103A1Q9BTL3 118 aaKnown RBP0.72□□□□□ -2.29
HMGB1P36-201ENST00000487709 CUX1P39880 1505 aa0.72□□□□□ -2.29
HMGB1P36-201ENST00000487709 SCN7AQ01118 1682 aa0.72□□□□□ -2.29
HMGB1P36-201ENST00000487709 MYMXA0A1B0GTQ4 84 aa0.71□□□□□ -2.3
HMGB1P36-201ENST00000487709 IQCF6A8MYZ5 107 aa0.71□□□□□ -2.3
HMGB1P36-201ENST00000487709 WFDC2Q14508 124 aa0.71□□□□□ -2.3
HMGB1P36-201ENST00000487709 PLGLAQ15195 96 aa0.71□□□□□ -2.3
HMGB1P36-201ENST00000487709 C6orf201Q7Z4U5 140 aa0.71□□□□□ -2.3
HMGB1P36-201ENST00000487709 ERVK-7P63135 1459 aa0.71□□□□□ -2.3
HMGB1P36-201ENST00000487709 JMJD1CQ15652 2540 aa0.71□□□□□ -2.3
HMGB1P36-201ENST00000487709 RRBP1Q9P2E9 1410 aaKnown RBP0.71□□□□□ -2.3
HMGB1P36-201ENST00000487709 LRP6O75581 1613 aa0.71□□□□□ -2.3
HMGB1P36-201ENST00000487709 KIF14Q15058 1648 aa0.71□□□□□ -2.3
HMGB1P36-201ENST00000487709 NEXMIFQ5QGS0 1516 aa0.7□□□□□ -2.3
HMGB1P36-201ENST00000487709 TRBV7-4A0A0J9YYF1 115 aa0.7□□□□□ -2.3
HMGB1P36-201ENST00000487709 A0A1B0GU69 56 aa0.7□□□□□ -2.3
HMGB1P36-201ENST00000487709 CNFNQ9BYD5 112 aa0.7□□□□□ -2.3
HMGB1P36-201ENST00000487709 UBE2D4Q9Y2X8 147 aa0.7□□□□□ -2.3
HMGB1P36-201ENST00000487709 SBF2Q86WG5 1849 aa0.7□□□□□ -2.3
HMGB1P36-201ENST00000487709 ZNF236Q9UL36 1845 aa0.7□□□□□ -2.3
HMGB1P36-201ENST00000487709 MAP3K4Q9Y6R4 1608 aa0.7□□□□□ -2.3
HMGB1P36-201ENST00000487709 PI4KAP42356 2102 aa0.7□□□□□ -2.3
HMGB1P36-201ENST00000487709 CEBPZOSA8MTT3 80 aa0.69□□□□□ -2.3
HMGB1P36-201ENST00000487709 PIGYQ3MUY2 71 aa0.69□□□□□ -2.3
HMGB1P36-201ENST00000487709 ASH1LQ9NR48 2969 aaKnown RBP0.69□□□□□ -2.3
HMGB1P36-201ENST00000487709 PLAC8Q9NZF1 115 aa0.69□□□□□ -2.3
HMGB1P36-201ENST00000487709 LRRC9Q6ZRR7 1453 aa0.68□□□□□ -2.3
HMGB1P36-201ENST00000487709 ZDBF2Q9HCK1 2354 aa0.68□□□□□ -2.3
HMGB1P36-201ENST00000487709 A0A1B0GUT8 65 aa0.68□□□□□ -2.3
HMGB1P36-201ENST00000487709 IGLC2P0DOY2 106 aa0.68□□□□□ -2.3
HMGB1P36-201ENST00000487709 IGLC3P0DOY3 106 aa0.68□□□□□ -2.3
HMGB1P36-201ENST00000487709 TP53AIP1Q9HCN2 124 aa0.68□□□□□ -2.3
HMGB1P36-201ENST00000487709 PRO0255Q9UI72 69 aa0.68□□□□□ -2.3
HMGB1P36-201ENST00000487709 SPTBP11277 2137 aa0.68□□□□□ -2.3
HMGB1P36-201ENST00000487709 KDM5DQ9BY66 1539 aa0.68□□□□□ -2.3
HMGB1P36-201ENST00000487709 APCP25054 2843 aa0.68□□□□□ -2.3
HMGB1P36-201ENST00000487709 TCHHQ07283 1943 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms