RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 COX11Q9Y6N1 276 aa11.58□□□□□ -0.56
MCF2L-226ENST00000486210 IGLV10-54A0A075B6I4 117 aa11.57□□□□□ -0.56
MCF2L-226ENST00000486210 IGKV2D-24A0A075B6R9 120 aa11.57□□□□□ -0.56
MCF2L-226ENST00000486210 C1orf196B1AJZ1 125 aa11.57□□□□□ -0.56
MCF2L-226ENST00000486210 G0S2P27469 103 aa11.57□□□□□ -0.56
MCF2L-226ENST00000486210 MIAQ16674 131 aa11.57□□□□□ -0.56
MCF2L-226ENST00000486210 HBDP02042 147 aa11.56□□□□□ -0.56
MCF2L-226ENST00000486210 PLA2G1BP04054 148 aaKnown RBP11.56□□□□□ -0.56
MCF2L-226ENST00000486210 SERTAD4-AS1Q5TG53 156 aa11.56□□□□□ -0.56
MCF2L-226ENST00000486210 KRTAP26-1Q6PEX3 210 aa11.56□□□□□ -0.56
MCF2L-226ENST00000486210 FAM19A2Q8N3H0 131 aa11.56□□□□□ -0.56
MCF2L-226ENST00000486210 SCGB3A1Q96QR1 104 aa11.56□□□□□ -0.56
MCF2L-226ENST00000486210 LINC00959A0A1B0GUT2 108 aa11.55□□□□□ -0.56
MCF2L-226ENST00000486210 PDZD11Q5EBL8 140 aa11.55□□□□□ -0.56
MCF2L-226ENST00000486210 ERASQ7Z444 233 aa11.55□□□□□ -0.56
MCF2L-226ENST00000486210 LINC00528Q8N1L1 170 aa11.55□□□□□ -0.56
MCF2L-226ENST00000486210 TIMM17AQ99595 171 aa11.55□□□□□ -0.56
MCF2L-226ENST00000486210 C1orf43Q9BWL3 253 aa11.55□□□□□ -0.56
MCF2L-226ENST00000486210 HSBP1O75506 76 aa11.54□□□□□ -0.56
MCF2L-226ENST00000486210 Q6ZSA8 131 aa11.54□□□□□ -0.56
MCF2L-226ENST00000486210 LINC00173Q6ZV60 143 aa11.54□□□□□ -0.56
MCF2L-226ENST00000486210 TMEM141Q96I45 108 aa11.54□□□□□ -0.56
MCF2L-226ENST00000486210 TRAV13-1A0A0B4J241 112 aa11.53□□□□□ -0.56
MCF2L-226ENST00000486210 TRAV8-4A0A0B4J246 113 aa11.53□□□□□ -0.56
MCF2L-226ENST00000486210 AMELXQ99217 191 aa11.53□□□□□ -0.56
MCF2L-226ENST00000486210 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-226ENST00000486210 LECT2O14960 151 aa11.52□□□□□ -0.57
MCF2L-226ENST00000486210 CHCHD10Q8WYQ3 142 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-226ENST00000486210 GAGE12HA6NDE8 117 aa11.51□□□□□ -0.57
MCF2L-226ENST00000486210 LINC01549A6NIU2 74 aa11.51□□□□□ -0.57
MCF2L-226ENST00000486210 IFITM10A6NMD0 228 aa11.51□□□□□ -0.57
MCF2L-226ENST00000486210 CCL25O15444 150 aa11.51□□□□□ -0.57
MCF2L-226ENST00000486210 NPSP0C0P6 89 aa11.51□□□□□ -0.57
MCF2L-226ENST00000486210 NDUFA6P56556 154 aa11.51□□□□□ -0.57
MCF2L-226ENST00000486210 TEX43Q6ZNM6 134 aa11.51□□□□□ -0.57
MCF2L-226ENST00000486210 VCX2Q9H322 139 aa11.51□□□□□ -0.57
MCF2L-226ENST00000486210 XCL1P47992 114 aa11.5□□□□□ -0.57
MCF2L-226ENST00000486210 KRTAP10-4P60372 401 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-226ENST00000486210 WFDC2Q14508 124 aa11.5□□□□□ -0.57
MCF2L-226ENST00000486210 SS18Q15532 418 aa11.5□□□□□ -0.57
MCF2L-226ENST00000486210 Q6ZN92 141 aa11.5□□□□□ -0.57
MCF2L-226ENST00000486210 BAALCQ8WXS3 180 aa11.5□□□□□ -0.57
MCF2L-226ENST00000486210 COA6Q5JTJ3 125 aaKnown RBP11.49□□□□□ -0.57
MCF2L-226ENST00000486210 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-226ENST00000486210 UBE2D1P51668 147 aa11.48□□□□□ -0.57
MCF2L-226ENST00000486210 FOXI1Q12951 378 aa11.48□□□□□ -0.57
MCF2L-226ENST00000486210 PKHD1L1Q86WI1 4243 aa11.48□□□□□ -0.57
MCF2L-226ENST00000486210 ATP5LO75964 103 aa11.46□□□□□ -0.57
MCF2L-226ENST00000486210 COX6A2Q02221 97 aa11.46□□□□□ -0.57
MCF2L-226ENST00000486210 PAPPA-AS1Q5QFB9 102 aa11.46□□□□□ -0.57
MCF2L-226ENST00000486210 LINC00242Q5T6M2 205 aa11.46□□□□□ -0.57
MCF2L-226ENST00000486210 CD164L2Q6UWJ8 174 aa11.46□□□□□ -0.57
MCF2L-226ENST00000486210 C2orf88Q9BSF0 95 aa11.46□□□□□ -0.57
MCF2L-226ENST00000486210 CST9LQ9H4G1 147 aa11.46□□□□□ -0.57
MCF2L-226ENST00000486210 FABP4P15090 132 aa11.45□□□□□ -0.58
MCF2L-226ENST00000486210 PMVKQ15126 192 aa11.45□□□□□ -0.58
MCF2L-226ENST00000486210 IFI27L1Q96BM0 104 aa11.45□□□□□ -0.58
MCF2L-226ENST00000486210 PLA2G2DQ9UNK4 145 aa11.45□□□□□ -0.58
MCF2L-226ENST00000486210 LEPROTL1O95214 131 aa11.44□□□□□ -0.58
MCF2L-226ENST00000486210 C14orf177Q52M58 125 aa11.44□□□□□ -0.58
MCF2L-226ENST00000486210 SCXQ7RTU7 201 aa11.44□□□□□ -0.58
MCF2L-226ENST00000486210 A0A0J9YXV3 536 aa11.43□□□□□ -0.58
MCF2L-226ENST00000486210 USP17L23D6RBM5 183 aa11.43□□□□□ -0.58
MCF2L-226ENST00000486210 FAM19A3Q7Z5A8 133 aa11.43□□□□□ -0.58
MCF2L-226ENST00000486210 C5orf38Q86SI9 138 aa11.43□□□□□ -0.58
MCF2L-226ENST00000486210 OXTP01178 125 aa11.42□□□□□ -0.58
MCF2L-226ENST00000486210 PRSS1P07477 247 aa11.42□□□□□ -0.58
MCF2L-226ENST00000486210 LINC01620Q4KN68 170 aa11.42□□□□□ -0.58
MCF2L-226ENST00000486210 IGHV3OR16-9A0A0B4J2B5 98 aa11.41□□□□□ -0.58
MCF2L-226ENST00000486210 C15orf56Q8N910 161 aa11.4□□□□□ -0.58
MCF2L-226ENST00000486210 HSPB8Q9UJY1 196 aa11.4□□□□□ -0.58
MCF2L-226ENST00000486210 IGLV4-69A0A075B6H9 119 aa11.39□□□□□ -0.59
MCF2L-226ENST00000486210 COX7A2LO14548 114 aa11.39□□□□□ -0.59
MCF2L-226ENST00000486210 H0Y8G0 127 aa11.38□□□□□ -0.59
MCF2L-226ENST00000486210 CHAC1Q9BUX1 264 aa11.38□□□□□ -0.59
MCF2L-226ENST00000486210 TRAV12-1A0A0B4J245 112 aa11.37□□□□□ -0.59
MCF2L-226ENST00000486210 TINCRA0A1B0GVN0 87 aa11.37□□□□□ -0.59
MCF2L-226ENST00000486210 IGLC3P0DOY3 106 aa11.37□□□□□ -0.59
MCF2L-226ENST00000486210 HIGD2BQ4VC39 106 aa11.37□□□□□ -0.59
MCF2L-226ENST00000486210 HIST3H2BBQ8N257 126 aa11.37□□□□□ -0.59
MCF2L-226ENST00000486210 CHTOPQ9Y3Y2 248 aaKnown RBP11.37□□□□□ -0.59
MCF2L-226ENST00000486210 A0A087WZ39 114 aa11.36□□□□□ -0.59
MCF2L-226ENST00000486210 S100A6P06703 90 aa11.36□□□□□ -0.59
MCF2L-226ENST00000486210 MALP21145 153 aa11.36□□□□□ -0.59
MCF2L-226ENST00000486210 HERVK_113P63121 156 aa11.36□□□□□ -0.59
MCF2L-226ENST00000486210 GEMIN7Q9H840 131 aaKnown RBP11.36□□□□□ -0.59
MCF2L-226ENST00000486210 CDKN2A-AS1Q9UH64 79 aa11.36□□□□□ -0.59
MCF2L-226ENST00000486210 IGHV1-58A0A0C4DH39 117 aa11.35□□□□□ -0.59
MCF2L-226ENST00000486210 SNRPEP62304 92 aaKnown RBP11.35□□□□□ -0.59
MCF2L-226ENST00000486210 SEC11AP67812 179 aa11.35□□□□□ -0.59
MCF2L-226ENST00000486210 CFAP161Q6P656 301 aa11.35□□□□□ -0.59
MCF2L-226ENST00000486210 CIRBP-AS1Q8TBR5 109 aa11.35□□□□□ -0.59
MCF2L-226ENST00000486210 PACRGQ96M98 296 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-226ENST00000486210 MRPL35Q9NZE8 188 aaKnown RBP11.35□□□□□ -0.59
MCF2L-226ENST00000486210 IGLV5-45A0A087WSX0 123 aa11.34□□□□□ -0.59
MCF2L-226ENST00000486210 C11orf86A6NJI1 115 aa11.34□□□□□ -0.59
MCF2L-226ENST00000486210 ODF1Q14990 250 aa11.34□□□□□ -0.59
MCF2L-226ENST00000486210 LINC00469Q8N7U9 141 aa11.34□□□□□ -0.59
MCF2L-226ENST00000486210 LINC00526Q96FQ7 95 aa11.34□□□□□ -0.59
MCF2L-226ENST00000486210 GVQW2A0A096LPI5 108 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms