RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 COMMD3Q9UBI1 195 aa1.88□□□□□ -2.11
SMARCC1-207ENST00000485833 C14orf166Q9Y224 244 aaKnown RBP1.88□□□□□ -2.11
SMARCC1-207ENST00000485833 PRELID1Q9Y255 219 aa1.88□□□□□ -2.11
SMARCC1-207ENST00000485833 TPRKBQ9Y3C4 175 aa1.88□□□□□ -2.11
SMARCC1-207ENST00000485833 TRAV21A0A0B4J279 112 aa1.87□□□□□ -2.11
SMARCC1-207ENST00000485833 IGKV3OR2-268A0A0C4DH90 116 aa1.87□□□□□ -2.11
SMARCC1-207ENST00000485833 LOC389332A0A1B0GUA5 103 aa1.87□□□□□ -2.11
SMARCC1-207ENST00000485833 NDUFC2-KCTD14E9PQ53 114 aa1.87□□□□□ -2.11
SMARCC1-207ENST00000485833 H3BVH4 76 aa1.87□□□□□ -2.11
SMARCC1-207ENST00000485833 M0R2T5 61 aa1.87□□□□□ -2.11
SMARCC1-207ENST00000485833 DEFA3P59666 94 aa1.87□□□□□ -2.11
SMARCC1-207ENST00000485833 LSM3P62310 102 aaKnown RBP1.87□□□□□ -2.11
SMARCC1-207ENST00000485833 ORAOV1Q8WV07 137 aa1.87□□□□□ -2.11
SMARCC1-207ENST00000485833 SMIM12Q96EX1 92 aa1.87□□□□□ -2.11
SMARCC1-207ENST00000485833 FMC1Q96HJ9 113 aa1.87□□□□□ -2.11
SMARCC1-207ENST00000485833 MRPS26Q9BYN8 205 aaKnown RBP1.87□□□□□ -2.11
SMARCC1-207ENST00000485833 PSENENQ9NZ42 101 aa1.87□□□□□ -2.11
SMARCC1-207ENST00000485833 TRBV7-3A0A075B6L6 115 aa1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 RBAKDNA6NC62 111 aa1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 A8MWV9 139 aa1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 C8orf87E5RJ46 101 aa1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 NBEAP1P0C6P0 100 aa1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 RANP62826 216 aaKnown RBP1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 EIF5AP63241 154 aaKnown RBP1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 PDE6HQ13956 83 aa1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 GOLT1AQ6ZVE7 132 aa1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 FAM231DQ6ZW35 169 aa1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 TMEM229BQ8NBD8 167 aa1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 CARD19Q96LW7 228 aa1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 HYLS1Q96M11 299 aa1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 CIB3Q96Q77 187 aaPredicted RBP1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 ZNF471Q9BX82 626 aaPredicted RBP1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 NPVFQ9HCQ7 196 aa1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 SLC39A9Q9NUM3 307 aa1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 RBM12B-AS1Q9P1G2 102 aa1.86□□□□□ -2.11
SMARCC1-207ENST00000485833 UBE2L5PA0A1B0GUS4 154 aa1.85□□□□□ -2.11
SMARCC1-207ENST00000485833 DUXBA0A1W2PPF3 345 aa1.85□□□□□ -2.11
SMARCC1-207ENST00000485833 GRIFINA4D1Z8 144 aa1.85□□□□□ -2.11
SMARCC1-207ENST00000485833 LGALS3P17931 250 aaKnown RBP1.85□□□□□ -2.11
SMARCC1-207ENST00000485833 PPP1R1AQ13522 171 aa1.85□□□□□ -2.11
SMARCC1-207ENST00000485833 SS18Q15532 418 aa1.85□□□□□ -2.11
SMARCC1-207ENST00000485833 RNASE13Q5GAN3 156 aaKnown RBP1.85□□□□□ -2.11
SMARCC1-207ENST00000485833 PRNTQ86SH4 94 aa1.85□□□□□ -2.11
SMARCC1-207ENST00000485833 C1orf64Q8NEQ6 169 aa1.85□□□□□ -2.11
SMARCC1-207ENST00000485833 CNBD2Q96M20 576 aa1.85□□□□□ -2.11
SMARCC1-207ENST00000485833 MAP1LC3AQ9H492 121 aa1.85□□□□□ -2.11
SMARCC1-207ENST00000485833 C8orf17Q9NRJ1 99 aa1.85□□□□□ -2.11
SMARCC1-207ENST00000485833 LINC00474Q9P2X8 69 aa1.85□□□□□ -2.11
SMARCC1-207ENST00000485833 PHLDA3Q9Y5J5 127 aa1.85□□□□□ -2.11
SMARCC1-207ENST00000485833 TRBV6-1A0A0K0K1D8 114 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 MUC21A0A140T8X8 626 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 FNDC10F2Z333 226 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 TMEM250H0YL14 139 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 M0R381 172 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 CST7O76096 145 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 SLC25A6P12236 298 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 S100A10P60903 97 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 RAB2AP61019 212 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 NCS1P62166 190 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 IQCJQ1A5X6 159 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 SPANXA2-OT1Q8N9U9 137 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 SFRP2Q96HF1 295 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 PFDN5Q99471 154 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 DERL1Q9BUN8 251 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 SH3BGRL3Q9H299 93 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 MIXL1Q9H2W2 232 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 CACFD1Q9UGQ2 172 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 LENEPQ9Y5L5 61 aa1.84□□□□□ -2.11
SMARCC1-207ENST00000485833 TRBV10-1A0A0K0K1A3 114 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 LOC107984640A0A0U1RRK4 108 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 IGSF23A1L1A6 192 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 FAM25AB3EWG3 89 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 FAM25CB3EWG5 89 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 FAM25GB3EWG6 89 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 DISC1C4P0D8 188 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 C9JQL5 133 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 SFT2D2O95562 160 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 ARMS2P0C7Q2 107 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 FGF7P21781 194 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 RPL12P30050 165 aaKnown RBP1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 SULT1A2P50226 295 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 CRIP1P50238 77 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 VBP1P61758 197 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 UBE2L3P68036 154 aaKnown RBP1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 SMAGPQ0VAQ4 97 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 NEDD8Q15843 81 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 PCOTHQ58A44 107 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 S100A7AQ86SG5 101 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 CLVS1Q8IUQ0 354 aaPredicted RBP1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 NUP35Q8NFH5 326 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 YPEL4Q96NS1 127 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 AQP10Q96PS8 301 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 NMES1Q9C002 83 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 VCX3BQ9H321 246 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 C11orf1Q9H5F2 150 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 SND1-IT1Q9HBX3 110 aa1.83□□□□□ -2.12
SMARCC1-207ENST00000485833 TRBV25-1A0A075B6N4 114 aa1.82□□□□□ -2.12
SMARCC1-207ENST00000485833 TMSB15BA0A087X1C1 80 aa1.82□□□□□ -2.12
SMARCC1-207ENST00000485833 SMIM31A0A1B0GVY4 71 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms