RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 UBE2D1P51668 147 aa8.41□□□□□ -1.06
HDAC7-223ENST00000485796 TMA7Q9Y2S6 64 aaKnown RBP8.41□□□□□ -1.06
HDAC7-223ENST00000485796 LRCOL1A6NCL2 159 aa8.4□□□□□ -1.06
HDAC7-223ENST00000485796 LECT2O14960 151 aa8.4□□□□□ -1.06
HDAC7-223ENST00000485796 FUSP35637 526 aaKnown RBP eCLIP8.4□□□□□ -1.06
HDAC7-223ENST00000485796 SNRPEP62304 92 aaKnown RBP8.4□□□□□ -1.06
HDAC7-223ENST00000485796 A0A0J9YXV3 536 aa8.39□□□□□ -1.07
HDAC7-223ENST00000485796 S100A2P29034 98 aa8.39□□□□□ -1.07
HDAC7-223ENST00000485796 FOXI1Q12951 378 aa8.39□□□□□ -1.07
HDAC7-223ENST00000485796 LINC00242Q5T6M2 205 aa8.39□□□□□ -1.07
HDAC7-223ENST00000485796 CD164L2Q6UWJ8 174 aa8.39□□□□□ -1.07
HDAC7-223ENST00000485796 HIST3H2BBQ8N257 126 aa8.39□□□□□ -1.07
HDAC7-223ENST00000485796 BIRC6Q9NR09 4857 aa8.38□□□□□ -1.07
HDAC7-223ENST00000485796 A0A087WTM6 91 aa8.38□□□□□ -1.07
HDAC7-223ENST00000485796 A0A1B0GVY2 172 aa8.38□□□□□ -1.07
HDAC7-223ENST00000485796 COX6A2Q02221 97 aa8.38□□□□□ -1.07
HDAC7-223ENST00000485796 C5orf38Q86SI9 138 aa8.38□□□□□ -1.07
HDAC7-223ENST00000485796 MAP1LC3CQ9BXW4 147 aa8.38□□□□□ -1.07
HDAC7-223ENST00000485796 GEMIN7Q9H840 131 aaKnown RBP8.38□□□□□ -1.07
HDAC7-223ENST00000485796 CHTOPQ9Y3Y2 248 aaKnown RBP8.38□□□□□ -1.07
HDAC7-223ENST00000485796 TRAV12-1A0A0B4J245 112 aa8.37□□□□□ -1.07
HDAC7-223ENST00000485796 C5orf52A6NGY3 159 aa8.37□□□□□ -1.07
HDAC7-223ENST00000485796 SEC11AP67812 179 aa8.37□□□□□ -1.07
HDAC7-223ENST00000485796 LINC00336Q6ZUF6 198 aa8.37□□□□□ -1.07
HDAC7-223ENST00000485796 PACRGQ96M98 296 aaPredicted RBP8.37□□□□□ -1.07
HDAC7-223ENST00000485796 TINCRA0A1B0GVN0 87 aa8.36□□□□□ -1.07
HDAC7-223ENST00000485796 COX7A2LO14548 114 aa8.36□□□□□ -1.07
HDAC7-223ENST00000485796 MALP21145 153 aa8.36□□□□□ -1.07
HDAC7-223ENST00000485796 HERVK_113P63121 156 aa8.36□□□□□ -1.07
HDAC7-223ENST00000485796 FAM19A3Q7Z5A8 133 aa8.36□□□□□ -1.07
HDAC7-223ENST00000485796 IGHV3OR16-9A0A0B4J2B5 98 aa8.35□□□□□ -1.07
HDAC7-223ENST00000485796 USP17L23D6RBM5 183 aa8.35□□□□□ -1.07
HDAC7-223ENST00000485796 IGLC3P0DOY3 106 aa8.35□□□□□ -1.07
HDAC7-223ENST00000485796 KRTAP10-2P60368 255 aa8.35□□□□□ -1.07
HDAC7-223ENST00000485796 KRTDAPP60985 99 aa8.35□□□□□ -1.07
HDAC7-223ENST00000485796 HIST1H2BLQ99880 126 aa8.35□□□□□ -1.07
HDAC7-223ENST00000485796 IGLV4-69A0A075B6H9 119 aa8.34□□□□□ -1.07
HDAC7-223ENST00000485796 SYS1-DBNDD2H3BUS1 97 aa8.34□□□□□ -1.07
HDAC7-223ENST00000485796 C3orf79P0CE67 100 aa8.34□□□□□ -1.07
HDAC7-223ENST00000485796 CFAP161Q6P656 301 aa8.34□□□□□ -1.07
HDAC7-223ENST00000485796 LINC00469Q8N7U9 141 aa8.34□□□□□ -1.07
HDAC7-223ENST00000485796 CHAC1Q9BUX1 264 aa8.34□□□□□ -1.07
HDAC7-223ENST00000485796 MRPL35Q9NZE8 188 aaKnown RBP8.34□□□□□ -1.07
HDAC7-223ENST00000485796 APOBP04114 4563 aaKnown RBP8.34□□□□□ -1.07
HDAC7-223ENST00000485796 C11orf86A6NJI1 115 aa8.33□□□□□ -1.08
HDAC7-223ENST00000485796 F8VRH5 84 aa8.33□□□□□ -1.08
HDAC7-223ENST00000485796 EREGO14944 169 aa8.33□□□□□ -1.08
HDAC7-223ENST00000485796 ODF1Q14990 250 aa8.33□□□□□ -1.08
HDAC7-223ENST00000485796 PMCHL2Q9BQD1 86 aa8.33□□□□□ -1.08
HDAC7-223ENST00000485796 CDKN2A-AS1Q9UH64 79 aa8.33□□□□□ -1.08
HDAC7-223ENST00000485796 A0A087WZ39 114 aa8.32□□□□□ -1.08
HDAC7-223ENST00000485796 IGHV1-58A0A0C4DH39 117 aa8.32□□□□□ -1.08
HDAC7-223ENST00000485796 APOMO95445 188 aa8.32□□□□□ -1.08
HDAC7-223ENST00000485796 HIGD2BQ4VC39 106 aa8.32□□□□□ -1.08
HDAC7-223ENST00000485796 PET117Q6UWS5 81 aa8.32□□□□□ -1.08
HDAC7-223ENST00000485796 SPATA12Q7Z6I5 190 aa8.32□□□□□ -1.08
HDAC7-223ENST00000485796 C15orf56Q8N910 161 aa8.32□□□□□ -1.08
HDAC7-223ENST00000485796 IGLV5-45A0A087WSX0 123 aa8.31□□□□□ -1.08
HDAC7-223ENST00000485796 hDV102S1A0JD36 115 aa8.31□□□□□ -1.08
HDAC7-223ENST00000485796 ZNF22P17026 224 aaPredicted RBP8.31□□□□□ -1.08
HDAC7-223ENST00000485796 C14orf177Q52M58 125 aa8.31□□□□□ -1.08
HDAC7-223ENST00000485796 TMEM170BQ5T4T1 132 aa8.31□□□□□ -1.08
HDAC7-223ENST00000485796 Q8N814 137 aa8.31□□□□□ -1.08
HDAC7-223ENST00000485796 NTN5Q8WTR8 489 aaPredicted RBP8.31□□□□□ -1.08
HDAC7-223ENST00000485796 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.3□□□□□ -1.08
HDAC7-223ENST00000485796 H3BRM9 83 aa8.3□□□□□ -1.08
HDAC7-223ENST00000485796 DPM2O94777 84 aa8.3□□□□□ -1.08
HDAC7-223ENST00000485796 SPINK8P0C7L1 97 aa8.3□□□□□ -1.08
HDAC7-223ENST00000485796 LINC01561Q8N1V8 128 aa8.3□□□□□ -1.08
HDAC7-223ENST00000485796 ORAOV1Q8WV07 137 aa8.3□□□□□ -1.08
HDAC7-223ENST00000485796 LINC00526Q96FQ7 95 aa8.3□□□□□ -1.08
HDAC7-223ENST00000485796 IGHV3-64A0A075B6Q5 118 aa8.29□□□□□ -1.08
HDAC7-223ENST00000485796 IGKCP01834 107 aa8.29□□□□□ -1.08
HDAC7-223ENST00000485796 SLPIP03973 132 aa8.29□□□□□ -1.08
HDAC7-223ENST00000485796 LINC01545Q5VT33 79 aa8.29□□□□□ -1.08
HDAC7-223ENST00000485796 RYR1P21817 5038 aa8.29□□□□□ -1.08
HDAC7-223ENST00000485796 GVQW2A0A096LPI5 108 aaPredicted RBP8.28□□□□□ -1.08
HDAC7-223ENST00000485796 C20orf202A1L168 122 aa8.28□□□□□ -1.08
HDAC7-223ENST00000485796 ZNF561-AS1K7EIQ3 104 aa8.28□□□□□ -1.08
HDAC7-223ENST00000485796 PLNP26678 52 aa8.28□□□□□ -1.08
HDAC7-223ENST00000485796 SPAG11BQ08648 103 aa8.28□□□□□ -1.08
HDAC7-223ENST00000485796 OR10D4PQ8NGN7 298 aa8.28□□□□□ -1.08
HDAC7-223ENST00000485796 TOMM7Q9P0U1 55 aa8.28□□□□□ -1.08
HDAC7-223ENST00000485796 KIAA1109Q2LD37 5005 aa8.28□□□□□ -1.08
HDAC7-223ENST00000485796 SMIM1B2RUZ4 78 aa8.27□□□□□ -1.09
HDAC7-223ENST00000485796 LINC01620Q4KN68 170 aa8.27□□□□□ -1.09
HDAC7-223ENST00000485796 TMEM223A0PJW6 202 aa8.26□□□□□ -1.09
HDAC7-223ENST00000485796 PRSS2P07478 247 aa8.26□□□□□ -1.09
HDAC7-223ENST00000485796 COX7B2Q8TF08 81 aa8.25□□□□□ -1.09
HDAC7-223ENST00000485796 IGLV5-52A0A0A0MRZ9 124 aa8.24□□□□□ -1.09
HDAC7-223ENST00000485796 SCGB1D1O95968 90 aa8.24□□□□□ -1.09
HDAC7-223ENST00000485796 KIAA0087Q14695 138 aa8.24□□□□□ -1.09
HDAC7-223ENST00000485796 C6orf226Q5I0X4 101 aa8.24□□□□□ -1.09
HDAC7-223ENST00000485796 ATOH7Q8N100 152 aa8.24□□□□□ -1.09
HDAC7-223ENST00000485796 CAMK2N2Q96S95 79 aa8.24□□□□□ -1.09
HDAC7-223ENST00000485796 KRTAP10-1P60331 282 aa8.23□□□□□ -1.09
HDAC7-223ENST00000485796 HERVK_113P61574 105 aa8.23□□□□□ -1.09
HDAC7-223ENST00000485796 SYCNQ0VAF6 134 aa8.23□□□□□ -1.09
HDAC7-223ENST00000485796 Q8IZM0 81 aa8.23□□□□□ -1.09
HDAC7-223ENST00000485796 C2orf48Q96LS8 159 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms