RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 COX11Q9Y6N1 276 aa11.54□□□□□ -0.56
CTSA-207ENST00000484855 K7EP13 123 aa11.54□□□□□ -0.56
CTSA-207ENST00000484855 C11orf45Q8TAV5 145 aa11.54□□□□□ -0.56
CTSA-207ENST00000484855 TM2D3Q9BRN9 247 aa11.54□□□□□ -0.56
CTSA-207ENST00000484855 HUWE1Q7Z6Z7 4374 aaKnown RBP11.53□□□□□ -0.56
CTSA-207ENST00000484855 NANOS2P60321 138 aaKnown RBP11.53□□□□□ -0.56
CTSA-207ENST00000484855 SRSF9Q13242 221 aaKnown RBP eCLIP11.53□□□□□ -0.56
CTSA-207ENST00000484855 NDUFA12Q9UI09 145 aa11.53□□□□□ -0.56
CTSA-207ENST00000484855 SMIM1B2RUZ4 78 aa11.52□□□□□ -0.56
CTSA-207ENST00000484855 LELP1Q5T871 98 aa11.52□□□□□ -0.56
CTSA-207ENST00000484855 SPANXB1Q9NS25 103 aaPredicted RBP11.52□□□□□ -0.56
CTSA-207ENST00000484855 IGLV5-39A0A0G2JS06 123 aa11.52□□□□□ -0.57
CTSA-207ENST00000484855 H3BNG1 76 aa11.52□□□□□ -0.57
CTSA-207ENST00000484855 ZFAND6Q6FIF0 208 aa11.52□□□□□ -0.57
CTSA-207ENST00000484855 C10orf126Q8N4M7 172 aa11.52□□□□□ -0.57
CTSA-207ENST00000484855 NHP2Q9NX24 153 aaKnown RBP11.51□□□□□ -0.57
CTSA-207ENST00000484855 MGAM2Q2M2H8 2515 aa11.51□□□□□ -0.57
CTSA-207ENST00000484855 A0A0J9YXY3 114 aa11.5□□□□□ -0.57
CTSA-207ENST00000484855 LINC00959A0A1B0GUT2 108 aa11.5□□□□□ -0.57
CTSA-207ENST00000484855 CLPSL2Q6UWE3 100 aa11.5□□□□□ -0.57
CTSA-207ENST00000484855 DEFB131BA0A096LNP1 70 aa11.48□□□□□ -0.57
CTSA-207ENST00000484855 TMEM238C9JI98 176 aa11.48□□□□□ -0.57
CTSA-207ENST00000484855 SMIM13P0DJ93 91 aa11.48□□□□□ -0.57
CTSA-207ENST00000484855 LYPD5Q6UWN5 251 aa11.48□□□□□ -0.57
CTSA-207ENST00000484855 LURAP1LQ8IV03 231 aa11.48□□□□□ -0.57
CTSA-207ENST00000484855 K7ERJ3 54 aa11.48□□□□□ -0.57
CTSA-207ENST00000484855 NDUFA1O15239 70 aa11.48□□□□□ -0.57
CTSA-207ENST00000484855 ANGP03950 147 aaKnown RBP11.48□□□□□ -0.57
CTSA-207ENST00000484855 SS18Q15532 418 aa11.48□□□□□ -0.57
CTSA-207ENST00000484855 Q8N3U1 123 aa11.48□□□□□ -0.57
CTSA-207ENST00000484855 RAB37Q96AX2 223 aa11.48□□□□□ -0.57
CTSA-207ENST00000484855 LINC00269Q8N2A0 174 aa11.47□□□□□ -0.57
CTSA-207ENST00000484855 IGHV3OR16-9A0A0B4J2B5 98 aa11.47□□□□□ -0.57
CTSA-207ENST00000484855 TMEM238LA0A1B0GVL6 79 aa11.47□□□□□ -0.57
CTSA-207ENST00000484855 A6NJY4 79 aa11.47□□□□□ -0.57
CTSA-207ENST00000484855 IGHV3-30P01768 117 aa11.47□□□□□ -0.57
CTSA-207ENST00000484855 IGHV3-30-5P0DP03 117 aa11.47□□□□□ -0.57
CTSA-207ENST00000484855 CCL25O15444 150 aa11.45□□□□□ -0.58
CTSA-207ENST00000484855 XCL1P47992 114 aa11.45□□□□□ -0.58
CTSA-207ENST00000484855 Q9H8V8 135 aa11.45□□□□□ -0.58
CTSA-207ENST00000484855 A0A087WZ39 114 aa11.44□□□□□ -0.58
CTSA-207ENST00000484855 C9orf118A6NHY6 69 aa11.44□□□□□ -0.58
CTSA-207ENST00000484855 REG3AQ06141 175 aa11.44□□□□□ -0.58
CTSA-207ENST00000484855 C5orf38Q86SI9 138 aa11.44□□□□□ -0.58
CTSA-207ENST00000484855 LITAFQ99732 161 aa11.44□□□□□ -0.58
CTSA-207ENST00000484855 A0A1B0GWB2 263 aa11.43□□□□□ -0.58
CTSA-207ENST00000484855 VAMP3Q15836 100 aa11.43□□□□□ -0.58
CTSA-207ENST00000484855 COX7B2Q8TF08 81 aa11.43□□□□□ -0.58
CTSA-207ENST00000484855 TRAV10A0A0B4J240 114 aa11.42□□□□□ -0.58
CTSA-207ENST00000484855 H3BUT2 72 aa11.42□□□□□ -0.58
CTSA-207ENST00000484855 NAA38Q9BRA0 125 aaKnown RBP11.42□□□□□ -0.58
CTSA-207ENST00000484855 DNAH9Q9NYC9 4486 aa11.42□□□□□ -0.58
CTSA-207ENST00000484855 TIMM17BO60830 172 aa11.41□□□□□ -0.58
CTSA-207ENST00000484855 SPANXDQ9BXN6 97 aa11.41□□□□□ -0.58
CTSA-207ENST00000484855 SPANXCQ9NY87 97 aa11.41□□□□□ -0.58
CTSA-207ENST00000484855 TOMM7Q9P0U1 55 aa11.41□□□□□ -0.58
CTSA-207ENST00000484855 ZNF625Q96I27 306 aaPredicted RBP11.41□□□□□ -0.58
CTSA-207ENST00000484855 ADAMTSL4-AS1Q5T5F5 129 aa11.4□□□□□ -0.58
CTSA-207ENST00000484855 MUSTN1Q8IVN3 82 aa11.4□□□□□ -0.58
CTSA-207ENST00000484855 CHCHD10Q8WYQ3 142 aaPredicted RBP11.4□□□□□ -0.58
CTSA-207ENST00000484855 IGLV10-54A0A075B6I4 117 aa11.4□□□□□ -0.59
CTSA-207ENST00000484855 RPL24P83731 157 aaKnown RBP11.4□□□□□ -0.59
CTSA-207ENST00000484855 CIRBPQ14011 172 aaKnown RBP11.4□□□□□ -0.59
CTSA-207ENST00000484855 WFDC10BQ8IUB3 73 aa11.4□□□□□ -0.59
CTSA-207ENST00000484855 IGHV3-33P01772 117 aa11.39□□□□□ -0.59
CTSA-207ENST00000484855 HERV-K104P63124 156 aa11.39□□□□□ -0.59
CTSA-207ENST00000484855 MIAQ16674 131 aa11.39□□□□□ -0.59
CTSA-207ENST00000484855 ESRGQ1W209 222 aa11.39□□□□□ -0.59
CTSA-207ENST00000484855 CD164L2Q6UWJ8 174 aa11.39□□□□□ -0.59
CTSA-207ENST00000484855 KLK12Q9UKR0 248 aa11.39□□□□□ -0.59
CTSA-207ENST00000484855 APOMO95445 188 aa11.38□□□□□ -0.59
CTSA-207ENST00000484855 PRSS2P07478 247 aa11.38□□□□□ -0.59
CTSA-207ENST00000484855 MEIG1Q5JSS6 88 aa11.38□□□□□ -0.59
CTSA-207ENST00000484855 A4D1N5 150 aa11.37□□□□□ -0.59
CTSA-207ENST00000484855 LINC01561Q8N1V8 128 aa11.37□□□□□ -0.59
CTSA-207ENST00000484855 PRR34Q9NV39 138 aa11.37□□□□□ -0.59
CTSA-207ENST00000484855 A0A1W2PPM0 123 aa11.36□□□□□ -0.59
CTSA-207ENST00000484855 IGLL5B9A064 214 aa11.36□□□□□ -0.59
CTSA-207ENST00000484855 COX7A2LO14548 114 aa11.36□□□□□ -0.59
CTSA-207ENST00000484855 C15orf53Q8NAA6 179 aa11.36□□□□□ -0.59
CTSA-207ENST00000484855 CRPP02741 224 aa11.35□□□□□ -0.59
CTSA-207ENST00000484855 CFC1BP0CG36 223 aa11.35□□□□□ -0.59
CTSA-207ENST00000484855 CFC1P0CG37 223 aa11.35□□□□□ -0.59
CTSA-207ENST00000484855 NPC2P61916 151 aa11.35□□□□□ -0.59
CTSA-207ENST00000484855 UBE2V1Q13404 147 aa11.35□□□□□ -0.59
CTSA-207ENST00000484855 DAND5Q8N907 189 aa11.35□□□□□ -0.59
CTSA-207ENST00000484855 B9D2Q9BPU9 175 aa11.35□□□□□ -0.59
CTSA-207ENST00000484855 A0A0U1RRA0 63 aa11.34□□□□□ -0.59
CTSA-207ENST00000484855 ENHOQ6UWT2 76 aa11.34□□□□□ -0.59
CTSA-207ENST00000484855 FABP2P12104 132 aa11.34□□□□□ -0.59
CTSA-207ENST00000484855 IFITM1P13164 125 aa11.34□□□□□ -0.59
CTSA-207ENST00000484855 FOXI1Q12951 378 aa11.34□□□□□ -0.59
CTSA-207ENST00000484855 PGPEP1Q9NXJ5 209 aa11.34□□□□□ -0.59
CTSA-207ENST00000484855 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.33□□□□□ -0.6
CTSA-207ENST00000484855 MALP21145 153 aa11.33□□□□□ -0.6
CTSA-207ENST00000484855 Q8IZM0 81 aa11.33□□□□□ -0.6
CTSA-207ENST00000484855 UBE2WQ96B02 151 aa11.33□□□□□ -0.6
CTSA-207ENST00000484855 GAGE12HA6NDE8 117 aa11.33□□□□□ -0.6
CTSA-207ENST00000484855 C6orf226Q5I0X4 101 aa11.33□□□□□ -0.6
CTSA-207ENST00000484855 SFTA2Q6UW10 78 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms