RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 F5H768 121 aa9.19□□□□□ -0.94
CPNE1-225ENST00000483495 G3V4G9 280 aa9.19□□□□□ -0.94
CPNE1-225ENST00000483495 SMIM1B2RUZ4 78 aa9.19□□□□□ -0.94
CPNE1-225ENST00000483495 K7EP34 96 aa9.19□□□□□ -0.94
CPNE1-225ENST00000483495 TMEM238C9JI98 176 aa9.18□□□□□ -0.94
CPNE1-225ENST00000483495 LITAFQ99732 161 aa9.18□□□□□ -0.94
CPNE1-225ENST00000483495 NDUFA1O15239 70 aa9.17□□□□□ -0.94
CPNE1-225ENST00000483495 A0A096LPF7 62 aa9.17□□□□□ -0.94
CPNE1-225ENST00000483495 SH2D6Q7Z4S9 175 aa9.17□□□□□ -0.94
CPNE1-225ENST00000483495 C11orf68Q9H3H3 251 aaKnown RBP9.17□□□□□ -0.94
CPNE1-225ENST00000483495 RETNQ9HD89 108 aa9.17□□□□□ -0.94
CPNE1-225ENST00000483495 SPCS1Q9Y6A9 102 aa9.17□□□□□ -0.94
CPNE1-225ENST00000483495 IGLL5B9A064 214 aa9.16□□□□□ -0.94
CPNE1-225ENST00000483495 RBX1P62877 108 aa9.16□□□□□ -0.94
CPNE1-225ENST00000483495 MRPL23Q16540 153 aaKnown RBP9.16□□□□□ -0.94
CPNE1-225ENST00000483495 NAA38Q9BRA0 125 aaKnown RBP9.16□□□□□ -0.94
CPNE1-225ENST00000483495 MAST4O15021 2626 aa9.16□□□□□ -0.94
CPNE1-225ENST00000483495 TIMM17BO60830 172 aa9.15□□□□□ -0.94
CPNE1-225ENST00000483495 SPANXDQ9BXN6 97 aa9.15□□□□□ -0.94
CPNE1-225ENST00000483495 SPANXCQ9NY87 97 aa9.15□□□□□ -0.94
CPNE1-225ENST00000483495 PKD1L1Q8TDX9 2849 aa9.15□□□□□ -0.94
CPNE1-225ENST00000483495 IGHV3OR16-9A0A0B4J2B5 98 aa9.15□□□□□ -0.95
CPNE1-225ENST00000483495 ICOSQ9Y6W8 199 aa9.15□□□□□ -0.95
CPNE1-225ENST00000483495 LINC00959A0A1B0GUT2 108 aa9.14□□□□□ -0.95
CPNE1-225ENST00000483495 TMEM262E9PQX1 116 aa9.14□□□□□ -0.95
CPNE1-225ENST00000483495 HTN3P15516 51 aa9.14□□□□□ -0.95
CPNE1-225ENST00000483495 MUSTN1Q8IVN3 82 aa9.13□□□□□ -0.95
CPNE1-225ENST00000483495 ANK2Q01484 3957 aa9.13□□□□□ -0.95
CPNE1-225ENST00000483495 H3BNG1 76 aa9.13□□□□□ -0.95
CPNE1-225ENST00000483495 CFC1BP0CG36 223 aa9.13□□□□□ -0.95
CPNE1-225ENST00000483495 CFC1P0CG37 223 aa9.13□□□□□ -0.95
CPNE1-225ENST00000483495 RPL24P83731 157 aaKnown RBP9.13□□□□□ -0.95
CPNE1-225ENST00000483495 ADAMTSL4-AS1Q5T5F5 129 aa9.13□□□□□ -0.95
CPNE1-225ENST00000483495 ZNF625Q96I27 306 aaPredicted RBP9.13□□□□□ -0.95
CPNE1-225ENST00000483495 COL6A5A8TX70 2615 aa9.12□□□□□ -0.95
CPNE1-225ENST00000483495 A0A087WZ39 114 aa9.12□□□□□ -0.95
CPNE1-225ENST00000483495 IGKV3OR2-268A0A0C4DH90 116 aa9.12□□□□□ -0.95
CPNE1-225ENST00000483495 MIAQ16674 131 aa9.12□□□□□ -0.95
CPNE1-225ENST00000483495 LELP1Q5T871 98 aa9.12□□□□□ -0.95
CPNE1-225ENST00000483495 Q9H8V8 135 aa9.12□□□□□ -0.95
CPNE1-225ENST00000483495 A4D1N5 150 aa9.11□□□□□ -0.95
CPNE1-225ENST00000483495 APOMO95445 188 aa9.1□□□□□ -0.95
CPNE1-225ENST00000483495 HERV-K104P63124 156 aa9.1□□□□□ -0.95
CPNE1-225ENST00000483495 SS18Q15532 418 aa9.1□□□□□ -0.95
CPNE1-225ENST00000483495 PGPEP1Q9NXJ5 209 aa9.1□□□□□ -0.95
CPNE1-225ENST00000483495 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.09□□□□□ -0.95
CPNE1-225ENST00000483495 A0A0B4J2C4 111 aa9.09□□□□□ -0.95
CPNE1-225ENST00000483495 IFITM1P13164 125 aa9.09□□□□□ -0.95
CPNE1-225ENST00000483495 CIRBPQ14011 172 aaKnown RBP9.09□□□□□ -0.95
CPNE1-225ENST00000483495 EIF4EBP3O60516 100 aaPredicted RBP9.08□□□□□ -0.96
CPNE1-225ENST00000483495 TSPAN13O95857 204 aa9.08□□□□□ -0.96
CPNE1-225ENST00000483495 LYRM7Q5U5X0 104 aa9.08□□□□□ -0.96
CPNE1-225ENST00000483495 Q6ZTC4 211 aa9.08□□□□□ -0.96
CPNE1-225ENST00000483495 LINC01561Q8N1V8 128 aa9.08□□□□□ -0.96
CPNE1-225ENST00000483495 COX7B2Q8TF08 81 aa9.08□□□□□ -0.96
CPNE1-225ENST00000483495 A0A0J9YWU9 116 aa9.08□□□□□ -0.96
CPNE1-225ENST00000483495 KPRPQ5T749 579 aaPredicted RBP9.08□□□□□ -0.96
CPNE1-225ENST00000483495 PRO1854Q9UHT4 67 aa9.08□□□□□ -0.96
CPNE1-225ENST00000483495 K7ERU9 68 aa9.07□□□□□ -0.96
CPNE1-225ENST00000483495 PRSS2P07478 247 aa9.07□□□□□ -0.96
CPNE1-225ENST00000483495 OCIAD2Q56VL3 154 aa9.07□□□□□ -0.96
CPNE1-225ENST00000483495 LYPD5Q6UWN5 251 aa9.07□□□□□ -0.96
CPNE1-225ENST00000483495 LINC00269Q8N2A0 174 aa9.07□□□□□ -0.96
CPNE1-225ENST00000483495 F8W1H4 67 aa9.06□□□□□ -0.96
CPNE1-225ENST00000483495 C5orf38Q86SI9 138 aa9.06□□□□□ -0.96
CPNE1-225ENST00000483495 K7EIL1 84 aa9.06□□□□□ -0.96
CPNE1-225ENST00000483495 ANGP03950 147 aaKnown RBP9.06□□□□□ -0.96
CPNE1-225ENST00000483495 XCL1P47992 114 aa9.06□□□□□ -0.96
CPNE1-225ENST00000483495 Q8N3U1 123 aa9.06□□□□□ -0.96
CPNE1-225ENST00000483495 PPDPFQ9H3Y8 114 aa9.06□□□□□ -0.96
CPNE1-225ENST00000483495 REG3AQ06141 175 aa9.05□□□□□ -0.96
CPNE1-225ENST00000483495 CLPSL2Q6UWE3 100 aa9.05□□□□□ -0.96
CPNE1-225ENST00000483495 CD164L2Q6UWJ8 174 aa9.05□□□□□ -0.96
CPNE1-225ENST00000483495 SPATA25Q9BR10 227 aa9.05□□□□□ -0.96
CPNE1-225ENST00000483495 TM2D3Q9BRN9 247 aa9.05□□□□□ -0.96
CPNE1-225ENST00000483495 CBY1Q9Y3M2 126 aa9.05□□□□□ -0.96
CPNE1-225ENST00000483495 IGHV3-33P01772 117 aa9.04□□□□□ -0.96
CPNE1-225ENST00000483495 SFTA2Q6UW10 78 aa9.04□□□□□ -0.96
CPNE1-225ENST00000483495 C11orf45Q8TAV5 145 aa9.04□□□□□ -0.96
CPNE1-225ENST00000483495 DAND5Q8N907 189 aa9.04□□□□□ -0.96
CPNE1-225ENST00000483495 LINC00308Q8TCZ7 52 aa9.04□□□□□ -0.96
CPNE1-225ENST00000483495 COPS9Q8WXC6 57 aa9.04□□□□□ -0.96
CPNE1-225ENST00000483495 PRR34Q9NV39 138 aa9.04□□□□□ -0.96
CPNE1-225ENST00000483495 PRB2P02812 416 aaPredicted RBP9.03□□□□□ -0.96
CPNE1-225ENST00000483495 NANOS2P60321 138 aaKnown RBP9.03□□□□□ -0.96
CPNE1-225ENST00000483495 MEIG1Q5JSS6 88 aa9.03□□□□□ -0.96
CPNE1-225ENST00000483495 TOMM7Q9P0U1 55 aa9.03□□□□□ -0.96
CPNE1-225ENST00000483495 Q8IZM0 81 aa9.02□□□□□ -0.96
CPNE1-225ENST00000483495 CHCHD10Q8WYQ3 142 aaPredicted RBP9.02□□□□□ -0.96
CPNE1-225ENST00000483495 TRBV20-1A0A075B6N2 111 aa9.02□□□□□ -0.97
CPNE1-225ENST00000483495 LOC107984156A0A0G2JMH3 177 aa9.02□□□□□ -0.97
CPNE1-225ENST00000483495 H3BMG7 143 aa9.02□□□□□ -0.97
CPNE1-225ENST00000483495 ARL17AQ8IVW1 177 aa9.02□□□□□ -0.97
CPNE1-225ENST00000483495 ERG28Q9UKR5 140 aa9.02□□□□□ -0.97
CPNE1-225ENST00000483495 DEFB131BA0A096LNP1 70 aa9.01□□□□□ -0.97
CPNE1-225ENST00000483495 NPC2P61916 151 aa9.01□□□□□ -0.97
CPNE1-225ENST00000483495 SOSTDC1Q6X4U4 206 aa9.01□□□□□ -0.97
CPNE1-225ENST00000483495 MDFIQ99750 246 aa9.01□□□□□ -0.97
CPNE1-225ENST00000483495 TENM3Q9P273 2699 aa9.01□□□□□ -0.97
CPNE1-225ENST00000483495 NOTCH1P46531 2555 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms