RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 RAPGEF6Q8TEU7 1601 aa2.43□□□□□ -2.02
R3HDM1-216ENST00000483065 MYO5CQ9NQX4 1742 aa2.43□□□□□ -2.02
R3HDM1-216ENST00000483065 GNGT1P63211 74 aa2.43□□□□□ -2.02
R3HDM1-216ENST00000483065 SMIM11BQ8TCY0 68 aa2.43□□□□□ -2.02
R3HDM1-216ENST00000483065 AFDNP55196 1824 aaKnown RBP2.42□□□□□ -2.02
R3HDM1-216ENST00000483065 SNRNP200O75643 2136 aaKnown RBP2.42□□□□□ -2.02
R3HDM1-216ENST00000483065 ALPK2Q86TB3 2170 aa2.42□□□□□ -2.02
R3HDM1-216ENST00000483065 EXPH5Q8NEV8 1989 aa2.42□□□□□ -2.02
R3HDM1-216ENST00000483065 A0A087WVE0 104 aa2.42□□□□□ -2.02
R3HDM1-216ENST00000483065 C10orf142B7Z368 130 aa2.42□□□□□ -2.02
R3HDM1-216ENST00000483065 H0Y9P7 68 aa2.42□□□□□ -2.02
R3HDM1-216ENST00000483065 PIN1P1O15428 100 aa2.42□□□□□ -2.02
R3HDM1-216ENST00000483065 SPINT3P49223 89 aa2.42□□□□□ -2.02
R3HDM1-216ENST00000483065 KRTAP13-4Q3LI77 160 aa2.42□□□□□ -2.02
R3HDM1-216ENST00000483065 LCE3CQ5T5A8 94 aa2.42□□□□□ -2.02
R3HDM1-216ENST00000483065 SHANK1Q9Y566 2161 aa2.42□□□□□ -2.02
R3HDM1-216ENST00000483065 CR1P17927 2039 aa2.41□□□□□ -2.02
R3HDM1-216ENST00000483065 COX8AP10176 69 aa2.41□□□□□ -2.02
R3HDM1-216ENST00000483065 HMGA1P17096 107 aaKnown RBP2.41□□□□□ -2.02
R3HDM1-216ENST00000483065 KIAA0100Q14667 2235 aaKnown RBP2.41□□□□□ -2.02
R3HDM1-216ENST00000483065 SIPA1L3O60292 1781 aaPredicted RBP2.41□□□□□ -2.02
R3HDM1-216ENST00000483065 BTAF1O14981 1849 aa2.4□□□□□ -2.02
R3HDM1-216ENST00000483065 ATP7BP35670 1465 aa2.4□□□□□ -2.02
R3HDM1-216ENST00000483065 MPDZO75970 2070 aa2.4□□□□□ -2.02
R3HDM1-216ENST00000483065 MDC1Q14676 2089 aaKnown RBP2.4□□□□□ -2.02
R3HDM1-216ENST00000483065 UBR1Q8IWV7 1749 aa2.4□□□□□ -2.02
R3HDM1-216ENST00000483065 TIAM1Q13009 1591 aa2.4□□□□□ -2.03
R3HDM1-216ENST00000483065 MED13Q9UHV7 2174 aa2.39□□□□□ -2.03
R3HDM1-216ENST00000483065 S100A3P33764 101 aa2.39□□□□□ -2.03
R3HDM1-216ENST00000483065 FXYD6P3P58550 94 aa2.39□□□□□ -2.03
R3HDM1-216ENST00000483065 PLAC4Q8WY50 150 aa2.39□□□□□ -2.03
R3HDM1-216ENST00000483065 TMEM131LA2VDJ0 1609 aa2.39□□□□□ -2.03
R3HDM1-216ENST00000483065 PHRF1Q9P1Y6 1649 aaKnown RBP2.39□□□□□ -2.03
R3HDM1-216ENST00000483065 RGPD2P0DJD1 1756 aa2.38□□□□□ -2.03
R3HDM1-216ENST00000483065 MYH4Q9Y623 1939 aa2.38□□□□□ -2.03
R3HDM1-216ENST00000483065 A0A096LNT2 108 aa2.38□□□□□ -2.03
R3HDM1-216ENST00000483065 SFTA3P0C7M3 94 aa2.38□□□□□ -2.03
R3HDM1-216ENST00000483065 KRTAP13-3Q3SY46 172 aa2.38□□□□□ -2.03
R3HDM1-216ENST00000483065 SPATA8Q6RVD6 105 aa2.38□□□□□ -2.03
R3HDM1-216ENST00000483065 DEFB119Q8N690 84 aa2.38□□□□□ -2.03
R3HDM1-216ENST00000483065 UNC13CQ8NB66 2214 aa2.38□□□□□ -2.03
R3HDM1-216ENST00000483065 SCN7AQ01118 1682 aa2.37□□□□□ -2.03
R3HDM1-216ENST00000483065 ZMYM4Q5VZL5 1548 aa2.37□□□□□ -2.03
R3HDM1-216ENST00000483065 PDCD11Q14690 1871 aaKnown RBP2.37□□□□□ -2.03
R3HDM1-216ENST00000483065 LRRC37A2A6NM11 1700 aa2.37□□□□□ -2.03
R3HDM1-216ENST00000483065 RTTNQ86VV8 2226 aa2.37□□□□□ -2.03
R3HDM1-216ENST00000483065 LOC285556D6RIA3 1793 aa2.37□□□□□ -2.03
R3HDM1-216ENST00000483065 TRBV6-1A0A0K0K1D8 114 aa2.37□□□□□ -2.03
R3HDM1-216ENST00000483065 LCE3AQ5TA76 89 aa2.37□□□□□ -2.03
R3HDM1-216ENST00000483065 DEFB107AQ8IZN7 70 aa2.37□□□□□ -2.03
R3HDM1-216ENST00000483065 FDCSPQ8NFU4 85 aa2.37□□□□□ -2.03
R3HDM1-216ENST00000483065 GNG13Q9P2W3 67 aa2.37□□□□□ -2.03
R3HDM1-216ENST00000483065 MED12Q93074 2177 aa2.37□□□□□ -2.03
R3HDM1-216ENST00000483065 PI4KAP42356 2102 aa2.36□□□□□ -2.03
R3HDM1-216ENST00000483065 ARFGEF3Q5TH69 2177 aa2.36□□□□□ -2.03
R3HDM1-216ENST00000483065 TRBV7-4A0A0J9YYF1 115 aa2.36□□□□□ -2.03
R3HDM1-216ENST00000483065 Q6ZRX8 168 aa2.36□□□□□ -2.03
R3HDM1-216ENST00000483065 ZCCHC13Q8WW36 166 aaKnown RBP2.36□□□□□ -2.03
R3HDM1-216ENST00000483065 PLAC8Q9NZF1 115 aa2.36□□□□□ -2.03
R3HDM1-216ENST00000483065 KNDC1Q76NI1 1749 aa2.36□□□□□ -2.03
R3HDM1-216ENST00000483065 COL5A1P20908 1838 aaPredicted RBP2.35□□□□□ -2.03
R3HDM1-216ENST00000483065 TNRC6BQ9UPQ9 1833 aaKnown RBP2.35□□□□□ -2.03
R3HDM1-216ENST00000483065 SHPRHQ149N8 1683 aa2.35□□□□□ -2.03
R3HDM1-216ENST00000483065 H3BVH4 76 aa2.35□□□□□ -2.03
R3HDM1-216ENST00000483065 KRTAP12-2P59991 146 aa2.35□□□□□ -2.03
R3HDM1-216ENST00000483065 KRTAP10-8P60410 259 aa2.35□□□□□ -2.03
R3HDM1-216ENST00000483065 ASXL1Q8IXJ9 1541 aa2.35□□□□□ -2.03
R3HDM1-216ENST00000483065 ARFGEF1Q9Y6D6 1849 aa2.35□□□□□ -2.03
R3HDM1-216ENST00000483065 NOTCH3Q9UM47 2321 aa2.34□□□□□ -2.03
R3HDM1-216ENST00000483065 ATXN8Q156A1 80 aa2.34□□□□□ -2.03
R3HDM1-216ENST00000483065 C10orf113Q5VZT2 155 aa2.34□□□□□ -2.03
R3HDM1-216ENST00000483065 LINC00472Q9H8W2 130 aa2.34□□□□□ -2.03
R3HDM1-216ENST00000483065 ALKQ9UM73 1620 aa2.34□□□□□ -2.04
R3HDM1-216ENST00000483065 NUP188Q5SRE5 1749 aa2.34□□□□□ -2.04
R3HDM1-216ENST00000483065 IFT172Q9UG01 1749 aa2.34□□□□□ -2.04
R3HDM1-216ENST00000483065 ANKRD50Q9ULJ7 1429 aa2.34□□□□□ -2.04
R3HDM1-216ENST00000483065 C1orf167Q5SNV9 1468 aa2.33□□□□□ -2.04
R3HDM1-216ENST00000483065 DLG5Q8TDM6 1919 aa2.33□□□□□ -2.04
R3HDM1-216ENST00000483065 MADDQ8WXG6 1647 aa2.33□□□□□ -2.04
R3HDM1-216ENST00000483065 KRTAP10-3P60369 221 aa2.33□□□□□ -2.04
R3HDM1-216ENST00000483065 PCOTHQ58A44 107 aa2.33□□□□□ -2.04
R3HDM1-216ENST00000483065 PROK2Q9HC23 129 aa2.33□□□□□ -2.04
R3HDM1-216ENST00000483065 FN1P02751 2386 aaKnown RBP2.33□□□□□ -2.04
R3HDM1-216ENST00000483065 CCDC180Q9P1Z9 1646 aa2.32□□□□□ -2.04
R3HDM1-216ENST00000483065 RGPD1P0DJD0 1748 aa2.32□□□□□ -2.04
R3HDM1-216ENST00000483065 GVQW2A0A096LPI5 108 aaPredicted RBP2.32□□□□□ -2.04
R3HDM1-216ENST00000483065 KRTAP10-1P60331 282 aa2.32□□□□□ -2.04
R3HDM1-216ENST00000483065 GBF1Q92538 1859 aa2.32□□□□□ -2.04
R3HDM1-216ENST00000483065 TARBP1Q13395 1621 aaKnown RBP2.31□□□□□ -2.04
R3HDM1-216ENST00000483065 PREX2Q70Z35 1606 aa2.31□□□□□ -2.04
R3HDM1-216ENST00000483065 LAMA4Q16363 1823 aa2.31□□□□□ -2.04
R3HDM1-216ENST00000483065 CRYBG1Q9Y4K1 1723 aa2.31□□□□□ -2.04
R3HDM1-216ENST00000483065 RPL37P61927 97 aaKnown RBP2.3□□□□□ -2.04
R3HDM1-216ENST00000483065 HAMPP81172 84 aa2.3□□□□□ -2.04
R3HDM1-216ENST00000483065 SAMD9Q5K651 1589 aa2.3□□□□□ -2.04
R3HDM1-216ENST00000483065 PIK3C2BO00750 1634 aa2.3□□□□□ -2.04
R3HDM1-216ENST00000483065 E9PCH4 1651 aa2.3□□□□□ -2.04
R3HDM1-216ENST00000483065 PCDH15Q96QU1 1955 aa2.3□□□□□ -2.04
R3HDM1-216ENST00000483065 KDM3BQ7LBC6 1761 aa2.29□□□□□ -2.04
R3HDM1-216ENST00000483065 C5P01031 1676 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms