RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 DEFB107AQ8IZN7 70 aa1.24□□□□□ -2.21
CLCC1-209ENST00000482889 NEXMIFQ5QGS0 1516 aa1.24□□□□□ -2.21
CLCC1-209ENST00000482889 LOC285556D6RIA3 1793 aa1.24□□□□□ -2.21
CLCC1-209ENST00000482889 CLTCQ00610 1675 aaKnown RBP1.23□□□□□ -2.21
CLCC1-209ENST00000482889 KIF14Q15058 1648 aa1.23□□□□□ -2.21
CLCC1-209ENST00000482889 DIP2BQ9P265 1576 aa1.23□□□□□ -2.21
CLCC1-209ENST00000482889 D6R8Y8 96 aa1.23□□□□□ -2.21
CLCC1-209ENST00000482889 BCE1O60756 84 aa1.23□□□□□ -2.21
CLCC1-209ENST00000482889 HMGN2P05204 90 aaKnown RBP1.23□□□□□ -2.21
CLCC1-209ENST00000482889 MUSTN1Q8IVN3 82 aa1.23□□□□□ -2.21
CLCC1-209ENST00000482889 SMIM4Q8WVI0 70 aa1.23□□□□□ -2.21
CLCC1-209ENST00000482889 LINC00472Q9H8W2 130 aa1.23□□□□□ -2.21
CLCC1-209ENST00000482889 PROK2Q9HC23 129 aa1.23□□□□□ -2.21
CLCC1-209ENST00000482889 SMCO4Q9NRQ5 59 aa1.23□□□□□ -2.21
CLCC1-209ENST00000482889 RGPD3A6NKT7 1758 aaPredicted RBP1.23□□□□□ -2.21
CLCC1-209ENST00000482889 FLG2Q5D862 2391 aaPredicted RBP1.22□□□□□ -2.21
CLCC1-209ENST00000482889 DCAF1Q9Y4B6 1507 aa1.22□□□□□ -2.21
CLCC1-209ENST00000482889 GCHFRP30047 84 aa1.22□□□□□ -2.21
CLCC1-209ENST00000482889 LINC00643Q86TS7 51 aa1.22□□□□□ -2.21
CLCC1-209ENST00000482889 SMIM11BQ8TCY0 68 aa1.22□□□□□ -2.21
CLCC1-209ENST00000482889 PEAK1Q9H792 1746 aa1.22□□□□□ -2.21
CLCC1-209ENST00000482889 FANCAO15360 1455 aa1.22□□□□□ -2.21
CLCC1-209ENST00000482889 NLRP1Q9C000 1473 aa1.22□□□□□ -2.21
CLCC1-209ENST00000482889 TCHHQ07283 1943 aa1.22□□□□□ -2.21
CLCC1-209ENST00000482889 ROS1P08922 2347 aa1.22□□□□□ -2.21
CLCC1-209ENST00000482889 ABCA1O95477 2261 aa1.22□□□□□ -2.21
CLCC1-209ENST00000482889 CEP350Q5VT06 3117 aa1.22□□□□□ -2.21
CLCC1-209ENST00000482889 DNMBPQ6XZF7 1577 aa1.21□□□□□ -2.22
CLCC1-209ENST00000482889 DIP2CQ9Y2E4 1556 aa1.21□□□□□ -2.22
CLCC1-209ENST00000482889 IFT172Q9UG01 1749 aa1.21□□□□□ -2.22
CLCC1-209ENST00000482889 KIF21AQ7Z4S6 1674 aa1.21□□□□□ -2.22
CLCC1-209ENST00000482889 MYMXA0A1B0GTQ4 84 aa1.21□□□□□ -2.22
CLCC1-209ENST00000482889 G3V318 75 aa1.21□□□□□ -2.22
CLCC1-209ENST00000482889 PDCD5O14737 125 aa1.21□□□□□ -2.22
CLCC1-209ENST00000482889 HAMPP81172 84 aa1.21□□□□□ -2.22
CLCC1-209ENST00000482889 COX17Q14061 63 aa1.21□□□□□ -2.22
CLCC1-209ENST00000482889 SPINK13Q1W4C9 94 aa1.21□□□□□ -2.22
CLCC1-209ENST00000482889 Q6ZSA8 131 aa1.21□□□□□ -2.22
CLCC1-209ENST00000482889 C6orf201Q7Z4U5 140 aa1.21□□□□□ -2.22
CLCC1-209ENST00000482889 MED13LQ71F56 2210 aa1.21□□□□□ -2.22
CLCC1-209ENST00000482889 SIPA1L3O60292 1781 aaPredicted RBP1.21□□□□□ -2.22
CLCC1-209ENST00000482889 MYO3AQ8NEV4 1616 aa1.2□□□□□ -2.22
CLCC1-209ENST00000482889 CFDP00746 253 aaPredicted RBP1.2□□□□□ -2.22
CLCC1-209ENST00000482889 ACYP1P07311 99 aa1.2□□□□□ -2.22
CLCC1-209ENST00000482889 RPL37P61927 97 aaKnown RBP1.2□□□□□ -2.22
CLCC1-209ENST00000482889 Q5BKY6 102 aa1.2□□□□□ -2.22
CLCC1-209ENST00000482889 Q6JHZ5 121 aa1.2□□□□□ -2.22
CLCC1-209ENST00000482889 DEFB119Q8N690 84 aa1.2□□□□□ -2.22
CLCC1-209ENST00000482889 SPRR4Q96PI1 79 aa1.2□□□□□ -2.22
CLCC1-209ENST00000482889 THOC2Q8NI27 1593 aaKnown RBP1.2□□□□□ -2.22
CLCC1-209ENST00000482889 ASCC3Q8N3C0 2202 aaKnown RBP1.2□□□□□ -2.22
CLCC1-209ENST00000482889 SUPT6HQ7KZ85 1726 aaKnown RBP1.2□□□□□ -2.22
CLCC1-209ENST00000482889 IQSEC2Q5JU85 1478 aa1.19□□□□□ -2.22
CLCC1-209ENST00000482889 PPLO60437 1756 aa1.19□□□□□ -2.22
CLCC1-209ENST00000482889 SSC5DA1L4H1 1573 aa1.19□□□□□ -2.22
CLCC1-209ENST00000482889 SPINK7P58062 85 aa1.19□□□□□ -2.22
CLCC1-209ENST00000482889 KRTAP10-4P60372 401 aaPredicted RBP1.19□□□□□ -2.22
CLCC1-209ENST00000482889 GNGT1P63211 74 aa1.19□□□□□ -2.22
CLCC1-209ENST00000482889 PLGLAQ15195 96 aa1.19□□□□□ -2.22
CLCC1-209ENST00000482889 C10orf113Q5VZT2 155 aa1.19□□□□□ -2.22
CLCC1-209ENST00000482889 C18orf32Q8TCD1 76 aa1.19□□□□□ -2.22
CLCC1-209ENST00000482889 UBR1Q8IWV7 1749 aa1.18□□□□□ -2.22
CLCC1-209ENST00000482889 BTAF1O14981 1849 aa1.18□□□□□ -2.22
CLCC1-209ENST00000482889 CEBPZOSA8MTT3 80 aa1.18□□□□□ -2.22
CLCC1-209ENST00000482889 HMGN3Q15651 99 aa1.18□□□□□ -2.22
CLCC1-209ENST00000482889 LINC01600Q96MT4 127 aa1.18□□□□□ -2.22
CLCC1-209ENST00000482889 TMEM263Q8WUH6 116 aaKnown RBP1.17□□□□□ -2.22
CLCC1-209ENST00000482889 PDCD11Q14690 1871 aaKnown RBP1.17□□□□□ -2.22
CLCC1-209ENST00000482889 F5P12259 2224 aa1.17□□□□□ -2.22
CLCC1-209ENST00000482889 LRRIQ1Q96JM4 1722 aa1.17□□□□□ -2.22
CLCC1-209ENST00000482889 OTOGLQ3ZCN5 2332 aa1.16□□□□□ -2.22
CLCC1-209ENST00000482889 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.16□□□□□ -2.22
CLCC1-209ENST00000482889 ABCC2Q92887 1545 aa1.16□□□□□ -2.22
CLCC1-209ENST00000482889 KNDC1Q76NI1 1749 aa1.16□□□□□ -2.22
CLCC1-209ENST00000482889 SMIM31A0A1B0GVY4 71 aa1.16□□□□□ -2.22
CLCC1-209ENST00000482889 H0Y9P7 68 aa1.16□□□□□ -2.22
CLCC1-209ENST00000482889 SMIM13P0DJ93 91 aa1.16□□□□□ -2.22
CLCC1-209ENST00000482889 LINC00846Q9NV44 126 aa1.16□□□□□ -2.22
CLCC1-209ENST00000482889 CCDC88BA6NC98 1476 aa1.16□□□□□ -2.22
CLCC1-209ENST00000482889 MYO7BQ6PIF6 2116 aa1.16□□□□□ -2.22
CLCC1-209ENST00000482889 MYO7AQ13402 2215 aa1.16□□□□□ -2.22
CLCC1-209ENST00000482889 ANKARQ7Z5J8 1434 aa1.15□□□□□ -2.22
CLCC1-209ENST00000482889 MAP3K4Q9Y6R4 1608 aa1.15□□□□□ -2.22
CLCC1-209ENST00000482889 SSBP3-AS1Q7Z2R9 100 aa1.15□□□□□ -2.23
CLCC1-209ENST00000482889 UBE2D4Q9Y2X8 147 aa1.15□□□□□ -2.23
CLCC1-209ENST00000482889 C1orf167Q5SNV9 1468 aa1.15□□□□□ -2.23
CLCC1-209ENST00000482889 CACNA1AO00555 2505 aa1.14□□□□□ -2.23
CLCC1-209ENST00000482889 K7EIL1 84 aa1.14□□□□□ -2.23
CLCC1-209ENST00000482889 SPATA8Q6RVD6 105 aa1.14□□□□□ -2.23
CLCC1-209ENST00000482889 UBE2DNLQ8IWF7 75 aa1.14□□□□□ -2.23
CLCC1-209ENST00000482889 KRTAP4-1Q9BYQ7 146 aa1.14□□□□□ -2.23
CLCC1-209ENST00000482889 PLAC8Q9NZF1 115 aa1.14□□□□□ -2.23
CLCC1-209ENST00000482889 CLIP1P30622 1438 aa1.14□□□□□ -2.23
CLCC1-209ENST00000482889 CCDC141Q6ZP82 1450 aa1.13□□□□□ -2.23
CLCC1-209ENST00000482889 KMT2BQ9UMN6 2715 aaPredicted RBP1.13□□□□□ -2.23
CLCC1-209ENST00000482889 LAMA4Q16363 1823 aa1.13□□□□□ -2.23
CLCC1-209ENST00000482889 TRBV6-1A0A0K0K1D8 114 aa1.13□□□□□ -2.23
CLCC1-209ENST00000482889 UGGT2Q9NYU1 1516 aa1.13□□□□□ -2.23
CLCC1-209ENST00000482889 ZDBF2Q9HCK1 2354 aa1.13□□□□□ -2.23
CLCC1-209ENST00000482889 ZFHX3Q15911 3703 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms