RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 LINC00336Q6ZUF6 198 aa8.75□□□□□ -1.01
HDAC1-208ENST00000482310 C5orf38Q86SI9 138 aa8.75□□□□□ -1.01
HDAC1-208ENST00000482310 CST9LQ9H4G1 147 aa8.75□□□□□ -1.01
HDAC1-208ENST00000482310 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.74□□□□□ -1.01
HDAC1-208ENST00000482310 A0A0J9YXV3 536 aa8.74□□□□□ -1.01
HDAC1-208ENST00000482310 USP17L23D6RBM5 183 aa8.74□□□□□ -1.01
HDAC1-208ENST00000482310 S100A6P06703 90 aa8.74□□□□□ -1.01
HDAC1-208ENST00000482310 NPSP0C0P6 89 aa8.74□□□□□ -1.01
HDAC1-208ENST00000482310 COX6A2Q02221 97 aa8.74□□□□□ -1.01
HDAC1-208ENST00000482310 CD164L2Q6UWJ8 174 aa8.74□□□□□ -1.01
HDAC1-208ENST00000482310 PKD1P98161 4303 aa8.73□□□□□ -1.01
HDAC1-208ENST00000482310 LRCOL1A6NCL2 159 aa8.73□□□□□ -1.01
HDAC1-208ENST00000482310 EREGO14944 169 aa8.73□□□□□ -1.01
HDAC1-208ENST00000482310 MALP21145 153 aa8.73□□□□□ -1.01
HDAC1-208ENST00000482310 HIGD2BQ4VC39 106 aa8.73□□□□□ -1.01
HDAC1-208ENST00000482310 LINC00242Q5T6M2 205 aa8.73□□□□□ -1.01
HDAC1-208ENST00000482310 HSPB8Q9UJY1 196 aa8.73□□□□□ -1.01
HDAC1-208ENST00000482310 TMA7Q9Y2S6 64 aaKnown RBP8.73□□□□□ -1.01
HDAC1-208ENST00000482310 COX7A2LO14548 114 aa8.72□□□□□ -1.01
HDAC1-208ENST00000482310 COA6Q5JTJ3 125 aaKnown RBP8.72□□□□□ -1.01
HDAC1-208ENST00000482310 GEMIN7Q9H840 131 aaKnown RBP8.72□□□□□ -1.01
HDAC1-208ENST00000482310 HECTD4Q9Y4D8 3996 aa8.72□□□□□ -1.01
HDAC1-208ENST00000482310 DNAH11Q96DT5 4516 aa8.72□□□□□ -1.01
HDAC1-208ENST00000482310 SPATA12Q7Z6I5 190 aa8.71□□□□□ -1.02
HDAC1-208ENST00000482310 LINC00526Q96FQ7 95 aa8.71□□□□□ -1.02
HDAC1-208ENST00000482310 hDV102S1A0JD36 115 aa8.7□□□□□ -1.02
HDAC1-208ENST00000482310 LINC00469Q8N7U9 141 aa8.7□□□□□ -1.02
HDAC1-208ENST00000482310 Q8N814 137 aa8.7□□□□□ -1.02
HDAC1-208ENST00000482310 C15orf56Q8N910 161 aa8.7□□□□□ -1.02
HDAC1-208ENST00000482310 CHAC1Q9BUX1 264 aa8.7□□□□□ -1.02
HDAC1-208ENST00000482310 CHTOPQ9Y3Y2 248 aaKnown RBP8.7□□□□□ -1.02
HDAC1-208ENST00000482310 IGHV3OR16-9A0A0B4J2B5 98 aa8.69□□□□□ -1.02
HDAC1-208ENST00000482310 KRTAP10-2P60368 255 aa8.69□□□□□ -1.02
HDAC1-208ENST00000482310 SNRPEP62304 92 aaKnown RBP8.69□□□□□ -1.02
HDAC1-208ENST00000482310 HERVK_113P63121 156 aa8.69□□□□□ -1.02
HDAC1-208ENST00000482310 PMCHL2Q9BQD1 86 aa8.69□□□□□ -1.02
HDAC1-208ENST00000482310 MAP1LC3CQ9BXW4 147 aa8.69□□□□□ -1.02
HDAC1-208ENST00000482310 CDKN2A-AS1Q9UH64 79 aa8.69□□□□□ -1.02
HDAC1-208ENST00000482310 IGLV4-69A0A075B6H9 119 aa8.68□□□□□ -1.02
HDAC1-208ENST00000482310 TINCRA0A1B0GVN0 87 aa8.68□□□□□ -1.02
HDAC1-208ENST00000482310 S100A2P29034 98 aa8.68□□□□□ -1.02
HDAC1-208ENST00000482310 HIST3H2BBQ8N257 126 aa8.68□□□□□ -1.02
HDAC1-208ENST00000482310 ORAOV1Q8WV07 137 aa8.68□□□□□ -1.02
HDAC1-208ENST00000482310 RYR1P21817 5038 aa8.68□□□□□ -1.02
HDAC1-208ENST00000482310 IGHV1-58A0A0C4DH39 117 aa8.67□□□□□ -1.02
HDAC1-208ENST00000482310 A0A1B0GVY2 172 aa8.67□□□□□ -1.02
HDAC1-208ENST00000482310 C11orf86A6NJI1 115 aa8.67□□□□□ -1.02
HDAC1-208ENST00000482310 SPINK8P0C7L1 97 aa8.67□□□□□ -1.02
HDAC1-208ENST00000482310 IGLC3P0DOY3 106 aa8.67□□□□□ -1.02
HDAC1-208ENST00000482310 KRTDAPP60985 99 aa8.67□□□□□ -1.02
HDAC1-208ENST00000482310 SEC11AP67812 179 aa8.67□□□□□ -1.02
HDAC1-208ENST00000482310 C14orf177Q52M58 125 aa8.67□□□□□ -1.02
HDAC1-208ENST00000482310 CFAP161Q6P656 301 aa8.67□□□□□ -1.02
HDAC1-208ENST00000482310 PACRGQ96M98 296 aaPredicted RBP8.67□□□□□ -1.02
HDAC1-208ENST00000482310 MRPL35Q9NZE8 188 aaKnown RBP8.67□□□□□ -1.02
HDAC1-208ENST00000482310 IGHV3-64A0A075B6Q5 118 aa8.66□□□□□ -1.02
HDAC1-208ENST00000482310 IGLV5-52A0A0A0MRZ9 124 aa8.66□□□□□ -1.02
HDAC1-208ENST00000482310 TRAV12-1A0A0B4J245 112 aa8.66□□□□□ -1.02
HDAC1-208ENST00000482310 APOMO95445 188 aa8.66□□□□□ -1.02
HDAC1-208ENST00000482310 ODF1Q14990 250 aa8.66□□□□□ -1.02
HDAC1-208ENST00000482310 TMEM170BQ5T4T1 132 aa8.66□□□□□ -1.02
HDAC1-208ENST00000482310 FAM19A3Q7Z5A8 133 aa8.66□□□□□ -1.02
HDAC1-208ENST00000482310 TOMM7Q9P0U1 55 aa8.66□□□□□ -1.02
HDAC1-208ENST00000482310 PKHD1P08F94 4074 aa8.65□□□□□ -1.02
HDAC1-208ENST00000482310 A0A087WZ39 114 aa8.65□□□□□ -1.02
HDAC1-208ENST00000482310 F8VRH5 84 aa8.65□□□□□ -1.02
HDAC1-208ENST00000482310 ZNF561-AS1K7EIQ3 104 aa8.65□□□□□ -1.02
HDAC1-208ENST00000482310 ZNF22P17026 224 aaPredicted RBP8.65□□□□□ -1.02
HDAC1-208ENST00000482310 SPAG11BQ08648 103 aa8.65□□□□□ -1.02
HDAC1-208ENST00000482310 LINC01620Q4KN68 170 aa8.65□□□□□ -1.02
HDAC1-208ENST00000482310 DYNC1H1Q14204 4646 aaKnown RBP8.64□□□□□ -1.03
HDAC1-208ENST00000482310 GVQW2A0A096LPI5 108 aaPredicted RBP8.64□□□□□ -1.03
HDAC1-208ENST00000482310 SYS1-DBNDD2H3BUS1 97 aa8.64□□□□□ -1.03
HDAC1-208ENST00000482310 C3orf79P0CE67 100 aa8.64□□□□□ -1.03
HDAC1-208ENST00000482310 H3BRM9 83 aa8.63□□□□□ -1.03
HDAC1-208ENST00000482310 HIST1H2BLQ99880 126 aa8.63□□□□□ -1.03
HDAC1-208ENST00000482310 IGLV5-45A0A087WSX0 123 aa8.62□□□□□ -1.03
HDAC1-208ENST00000482310 C5orf52A6NGY3 159 aa8.62□□□□□ -1.03
HDAC1-208ENST00000482310 C16orf90A8MZG2 172 aa8.62□□□□□ -1.03
HDAC1-208ENST00000482310 SMIM1B2RUZ4 78 aa8.62□□□□□ -1.03
HDAC1-208ENST00000482310 PRSS2P07478 247 aa8.62□□□□□ -1.03
HDAC1-208ENST00000482310 OR10D4PQ8NGN7 298 aa8.62□□□□□ -1.03
HDAC1-208ENST00000482310 NTN5Q8WTR8 489 aaPredicted RBP8.62□□□□□ -1.03
HDAC1-208ENST00000482310 DNAH5Q8TE73 4624 aa8.61□□□□□ -1.03
HDAC1-208ENST00000482310 DPM2O94777 84 aa8.61□□□□□ -1.03
HDAC1-208ENST00000482310 SLPIP03973 132 aa8.61□□□□□ -1.03
HDAC1-208ENST00000482310 CAMK2N2Q96S95 79 aa8.61□□□□□ -1.03
HDAC1-208ENST00000482310 IGKCP01834 107 aa8.6□□□□□ -1.03
HDAC1-208ENST00000482310 C2orf82Q6UX34 121 aa8.6□□□□□ -1.03
HDAC1-208ENST00000482310 CARD19Q96LW7 228 aa8.6□□□□□ -1.03
HDAC1-208ENST00000482310 PLNP26678 52 aa8.59□□□□□ -1.03
HDAC1-208ENST00000482310 PET117Q6UWS5 81 aa8.59□□□□□ -1.03
HDAC1-208ENST00000482310 Q6ZRU5 148 aa8.59□□□□□ -1.03
HDAC1-208ENST00000482310 LINC01561Q8N1V8 128 aa8.59□□□□□ -1.03
HDAC1-208ENST00000482310 PGPEP1Q9NXJ5 209 aa8.59□□□□□ -1.03
HDAC1-208ENST00000482310 ABCA13Q86UQ4 5058 aa8.58□□□□□ -1.04
HDAC1-208ENST00000482310 TMEM223A0PJW6 202 aa8.58□□□□□ -1.04
HDAC1-208ENST00000482310 SYCNQ0VAF6 134 aa8.58□□□□□ -1.04
HDAC1-208ENST00000482310 C6orf226Q5I0X4 101 aa8.58□□□□□ -1.04
HDAC1-208ENST00000482310 LINC01545Q5VT33 79 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms