RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 PSENENQ9NZ42 101 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 NEXMIFQ5QGS0 1516 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 ERICH3Q5RHP9 1530 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 NCOA6Q14686 2063 aaPredicted RBP1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 MYO7BQ6PIF6 2116 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 LOC285556D6RIA3 1793 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 M0R3E3 92 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 UQCR11O14957 56 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 PRR15LQ9BU68 103 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 CRCT1Q9UGL9 99 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 IQSEC2Q5JU85 1478 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 CCDC141Q6ZP82 1450 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 PDCD11Q14690 1871 aaKnown RBP1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 COL4A1P02462 1669 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 PEAK1Q9H792 1746 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 C7orf77A4D0Y5 90 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 H3BUT2 72 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 NCR3O14931 201 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 PRB1P04280 392 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 HMGN2P05204 90 aaKnown RBP1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 ACYP2P14621 99 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 SMIM11AP58511 58 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 LINC00643Q86TS7 51 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 SMCO4Q9NRQ5 59 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 A0A096LNT2 108 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 SMIM31A0A1B0GVY4 71 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 A0A1B0GWA3 101 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 KANTRA0A1W2PQU2 76 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 DEFA5Q01523 94 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 Q5BKY6 102 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 LINC00575Q6W349 94 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 FDCSPQ8NFU4 85 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 LINC00472Q9H8W2 130 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 KNTC1P50748 2209 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 AHCTF1Q8WYP5 2266 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 SUPT6HQ7KZ85 1726 aaKnown RBP1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 ZFHX3Q15911 3703 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 ADAMTS12P58397 1594 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 CFAP74Q9C0B2 1584 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 A0A087WVE0 104 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 IQCF6A8MYZ5 107 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 LY6G6CO95867 125 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 CFDP00746 253 aaPredicted RBP1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 ARMS2P0C7Q2 107 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 SPRR4Q96PI1 79 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 KIF21AQ7Z4S6 1674 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 IFT172Q9UG01 1749 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 CACNA1CQ13936 2221 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 ZNF236Q9UL36 1845 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 CLIP1P30622 1438 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 ANKARQ7Z5J8 1434 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 NCOA2Q15596 1464 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 ZDBF2Q9HCK1 2354 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 ABCC2Q92887 1545 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 ABCA8O94911 1581 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 CHD8Q9HCK8 2581 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 TECTAO75443 2155 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 PDCD5O14737 125 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 ACYP1P07311 99 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 MGPP08493 103 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 HMGN3Q15651 99 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 KCPQ6ZWJ8 1503 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 GVQW2A0A096LPI5 108 aaPredicted RBP1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 MYMXA0A1B0GTQ4 84 aa1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 SPINT3P49223 89 aa1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 COX17Q14061 63 aa1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 C18orf32Q8TCD1 76 aa1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 SMIM4Q8WVI0 70 aa1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 PLAC4Q8WY50 150 aa1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 F5P12259 2224 aa1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 FLG2Q5D862 2391 aaPredicted RBP1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 MACF1Q9UPN3 7388 aaKnown RBP1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 LEPROTL1O95214 131 aa1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 KRTAP4-1Q9BYQ7 146 aa1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 PROK2Q9HC23 129 aa1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 PLAC8Q9NZF1 115 aa1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 ABCC1P33527 1531 aa1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 SSC5DA1L4H1 1573 aa1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 TMEM131LA2VDJ0 1609 aa1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 IQGAP3Q86VI3 1631 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 UGGT2Q9NYU1 1516 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 D6R8Y8 96 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 G3V318 75 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 RPL37P61927 97 aaKnown RBP1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 SPINK13Q1W4C9 94 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 Q6ZRX8 168 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 MUSTN1Q8IVN3 82 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 SMIM11BQ8TCY0 68 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 LINC00846Q9NV44 126 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 TRANK1O15050 2925 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 A0A0C4DFX4 3053 aa1.26□□□□□ -2.21
SMARCA1-204ENST00000478420 BTAF1O14981 1849 aa1.26□□□□□ -2.21
SMARCA1-204ENST00000478420 PPRC1Q5VV67 1664 aaKnown RBP1.26□□□□□ -2.21
SMARCA1-204ENST00000478420 CADP27708 2225 aa1.26□□□□□ -2.21
SMARCA1-204ENST00000478420 GOLGA4Q13439 2230 aaKnown RBP1.26□□□□□ -2.21
SMARCA1-204ENST00000478420 PLGLAQ15195 96 aa1.26□□□□□ -2.21
SMARCA1-204ENST00000478420 DEFB107AQ8IZN7 70 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms