RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 LEPROTL1O95214 131 aa13.11□□□□□ -0.31
ACTB-210ENST00000477812 COX6A2Q02221 97 aa13.11□□□□□ -0.31
ACTB-210ENST00000477812 Q8N814 137 aa13.1□□□□□ -0.31
ACTB-210ENST00000477812 C15orf56Q8N910 161 aa13.1□□□□□ -0.31
ACTB-210ENST00000477812 TMA7Q9Y2S6 64 aaKnown RBP13.09□□□□□ -0.31
ACTB-210ENST00000477812 A0A0J9YXV3 536 aa13.08□□□□□ -0.32
ACTB-210ENST00000477812 COX7A2LO14548 114 aa13.08□□□□□ -0.32
ACTB-210ENST00000477812 HSPB8Q9UJY1 196 aa13.08□□□□□ -0.32
ACTB-210ENST00000477812 PKHD1P08F94 4074 aa13.08□□□□□ -0.32
ACTB-210ENST00000477812 IGLV4-69A0A075B6H9 119 aa13.07□□□□□ -0.32
ACTB-210ENST00000477812 FABP4P15090 132 aa13.07□□□□□ -0.32
ACTB-210ENST00000477812 C5orf38Q86SI9 138 aa13.07□□□□□ -0.32
ACTB-210ENST00000477812 PACRGQ96M98 296 aaPredicted RBP13.07□□□□□ -0.32
ACTB-210ENST00000477812 A0A087WZ39 114 aa13.06□□□□□ -0.32
ACTB-210ENST00000477812 TRAV12-1A0A0B4J245 112 aa13.06□□□□□ -0.32
ACTB-210ENST00000477812 TINCRA0A1B0GVN0 87 aa13.06□□□□□ -0.32
ACTB-210ENST00000477812 IGLC3P0DOY3 106 aa13.06□□□□□ -0.32
ACTB-210ENST00000477812 KRTAP10-2P60368 255 aa13.06□□□□□ -0.32
ACTB-210ENST00000477812 IGLV5-45A0A087WSX0 123 aa13.05□□□□□ -0.32
ACTB-210ENST00000477812 S100A6P06703 90 aa13.05□□□□□ -0.32
ACTB-210ENST00000477812 PRSS1P07477 247 aa13.05□□□□□ -0.32
ACTB-210ENST00000477812 HERVK_113P63121 156 aa13.05□□□□□ -0.32
ACTB-210ENST00000477812 SEC11AP67812 179 aa13.05□□□□□ -0.32
ACTB-210ENST00000477812 EPPK1P58107 5090 aaKnown RBP13.04□□□□□ -0.32
ACTB-210ENST00000477812 GVQW2A0A096LPI5 108 aaPredicted RBP13.04□□□□□ -0.32
ACTB-210ENST00000477812 EREGO14944 169 aa13.04□□□□□ -0.32
ACTB-210ENST00000477812 C14orf177Q52M58 125 aa13.04□□□□□ -0.32
ACTB-210ENST00000477812 CDKN2A-AS1Q9UH64 79 aa13.04□□□□□ -0.32
ACTB-210ENST00000477812 IGHV1-58A0A0C4DH39 117 aa13.03□□□□□ -0.32
ACTB-210ENST00000477812 CFAP161Q6P656 301 aa13.03□□□□□ -0.32
ACTB-210ENST00000477812 SPATA12Q7Z6I5 190 aa13.03□□□□□ -0.32
ACTB-210ENST00000477812 GEMIN7Q9H840 131 aaKnown RBP13.03□□□□□ -0.32
ACTB-210ENST00000477812 DNAH5Q8TE73 4624 aa13.03□□□□□ -0.32
ACTB-210ENST00000477812 ODF1Q14990 250 aa13.02□□□□□ -0.33
ACTB-210ENST00000477812 LINC01561Q8N1V8 128 aa13.02□□□□□ -0.33
ACTB-210ENST00000477812 HIST3H2BBQ8N257 126 aa13.02□□□□□ -0.33
ACTB-210ENST00000477812 IGHV3-64A0A075B6Q5 118 aa13.01□□□□□ -0.33
ACTB-210ENST00000477812 MALP21145 153 aa13.01□□□□□ -0.33
ACTB-210ENST00000477812 FUSP35637 526 aaKnown RBP eCLIP13.01□□□□□ -0.336e-7■■■□□ 15.9
ACTB-210ENST00000477812 NTN5Q8WTR8 489 aaPredicted RBP13.01□□□□□ -0.33
ACTB-210ENST00000477812 CHAC1Q9BUX1 264 aa13.01□□□□□ -0.33
ACTB-210ENST00000477812 CHTOPQ9Y3Y2 248 aaKnown RBP13.01□□□□□ -0.33
ACTB-210ENST00000477812 DYNC1H1Q14204 4646 aaKnown RBP13□□□□□ -0.33
ACTB-210ENST00000477812 C11orf86A6NJI1 115 aa13□□□□□ -0.33
ACTB-210ENST00000477812 F8VRH5 84 aa13□□□□□ -0.33
ACTB-210ENST00000477812 HIGD2BQ4VC39 106 aa13□□□□□ -0.33
ACTB-210ENST00000477812 LINC00469Q8N7U9 141 aa13□□□□□ -0.33
ACTB-210ENST00000477812 MRPL35Q9NZE8 188 aaKnown RBP13□□□□□ -0.33
ACTB-210ENST00000477812 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.99□□□□□ -0.33
ACTB-210ENST00000477812 hDV102S1A0JD36 115 aa12.99□□□□□ -0.33
ACTB-210ENST00000477812 SLPIP03973 132 aa12.99□□□□□ -0.33
ACTB-210ENST00000477812 ZNF22P17026 224 aaPredicted RBP12.99□□□□□ -0.33
ACTB-210ENST00000477812 MAP1LC3CQ9BXW4 147 aa12.99□□□□□ -0.33
ACTB-210ENST00000477812 APOMO95445 188 aa12.98□□□□□ -0.33
ACTB-210ENST00000477812 CDPF1Q6NVV7 123 aa12.98□□□□□ -0.33
ACTB-210ENST00000477812 OR10D4PQ8NGN7 298 aa12.98□□□□□ -0.33
ACTB-210ENST00000477812 PGPEP1Q9NXJ5 209 aa12.98□□□□□ -0.33
ACTB-210ENST00000477812 C5orf52A6NGY3 159 aa12.97□□□□□ -0.33
ACTB-210ENST00000477812 H0Y8G0 127 aa12.97□□□□□ -0.33
ACTB-210ENST00000477812 SYS1-DBNDD2H3BUS1 97 aa12.97□□□□□ -0.33
ACTB-210ENST00000477812 CNBPP62633 177 aaKnown RBP12.97□□□□□ -0.33
ACTB-210ENST00000477812 LINC00526Q96FQ7 95 aa12.97□□□□□ -0.33
ACTB-210ENST00000477812 HIST1H2BLQ99880 126 aa12.97□□□□□ -0.33
ACTB-210ENST00000477812 SMIM1B2RUZ4 78 aa12.96□□□□□ -0.33
ACTB-210ENST00000477812 SNRPEP62304 92 aaKnown RBP12.96□□□□□ -0.33
ACTB-210ENST00000477812 ORAOV1Q8WV07 137 aa12.96□□□□□ -0.33
ACTB-210ENST00000477812 IGLV5-52A0A0A0MRZ9 124 aa12.95□□□□□ -0.34
ACTB-210ENST00000477812 C3orf79P0CE67 100 aa12.95□□□□□ -0.34
ACTB-210ENST00000477812 SPAG11BQ08648 103 aa12.95□□□□□ -0.34
ACTB-210ENST00000477812 KIAA0087Q14695 138 aa12.95□□□□□ -0.34
ACTB-210ENST00000477812 LRP1BQ9NZR2 4599 aa12.93□□□□□ -0.34
ACTB-210ENST00000477812 PMCHL2Q9BQD1 86 aa12.93□□□□□ -0.34
ACTB-210ENST00000477812 IGLV5-39A0A0G2JS06 123 aa12.92□□□□□ -0.34
ACTB-210ENST00000477812 H3BRM9 83 aa12.92□□□□□ -0.34
ACTB-210ENST00000477812 ZNF561-AS1K7EIQ3 104 aa12.92□□□□□ -0.34
ACTB-210ENST00000477812 SPINK8P0C7L1 97 aa12.92□□□□□ -0.34
ACTB-210ENST00000477812 S100A2P29034 98 aa12.92□□□□□ -0.34
ACTB-210ENST00000477812 LINC01545Q5VT33 79 aa12.92□□□□□ -0.34
ACTB-210ENST00000477812 PET117Q6UWS5 81 aa12.92□□□□□ -0.34
ACTB-210ENST00000477812 C2orf48Q96LS8 159 aa12.92□□□□□ -0.34
ACTB-210ENST00000477812 PLNP26678 52 aa12.91□□□□□ -0.34
ACTB-210ENST00000477812 KRTDAPP60985 99 aa12.91□□□□□ -0.34
ACTB-210ENST00000477812 C16orf90A8MZG2 172 aa12.9□□□□□ -0.34
ACTB-210ENST00000477812 DPM2O94777 84 aa12.9□□□□□ -0.34
ACTB-210ENST00000477812 TMEM170BQ5T4T1 132 aa12.9□□□□□ -0.34
ACTB-210ENST00000477812 Q8IZM0 81 aa12.9□□□□□ -0.34
ACTB-210ENST00000477812 C9orf163Q8N9P6 203 aa12.9□□□□□ -0.34
ACTB-210ENST00000477812 TMEM223A0PJW6 202 aa12.89□□□□□ -0.35
ACTB-210ENST00000477812 KRTAP10-1P60331 282 aa12.88□□□□□ -0.35
ACTB-210ENST00000477812 SYCNQ0VAF6 134 aa12.88□□□□□ -0.35
ACTB-210ENST00000477812 LINC01620Q4KN68 170 aa12.88□□□□□ -0.35
ACTB-210ENST00000477812 F8WDY8 70 aa12.87□□□□□ -0.35
ACTB-210ENST00000477812 IGKCP01834 107 aa12.87□□□□□ -0.35
ACTB-210ENST00000477812 GCSHP23434 173 aa12.87□□□□□ -0.35
ACTB-210ENST00000477812 Q6ZRU5 148 aa12.87□□□□□ -0.35
ACTB-210ENST00000477812 CARD19Q96LW7 228 aa12.87□□□□□ -0.35
ACTB-210ENST00000477812 CAMK2N2Q96S95 79 aa12.87□□□□□ -0.35
ACTB-210ENST00000477812 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.86□□□□□ -0.35
ACTB-210ENST00000477812 C10orf25Q5T742 122 aa12.86□□□□□ -0.35
ACTB-210ENST00000477812 TOMM7Q9P0U1 55 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms