RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 GCN1Q92616 2671 aaKnown RBP8.01□□□□□ -1.13
COL27A1-204ENST00000477421 IFITM1P13164 125 aa8.01□□□□□ -1.13
COL27A1-204ENST00000477421 C9orf66Q5T8R8 295 aa8.01□□□□□ -1.13
COL27A1-204ENST00000477421 C15orf53Q8NAA6 179 aa8.01□□□□□ -1.13
COL27A1-204ENST00000477421 Q9HAA7 133 aa8.01□□□□□ -1.13
COL27A1-204ENST00000477421 CRYBG3Q68DQ2 2970 aa8.01□□□□□ -1.13
COL27A1-204ENST00000477421 TRAV26-1A0A087WT03 109 aa8.01□□□□□ -1.13
COL27A1-204ENST00000477421 EDA2RQ9HAV5 297 aa8.01□□□□□ -1.13
COL27A1-204ENST00000477421 KLK12Q9UKR0 248 aa8.01□□□□□ -1.13
COL27A1-204ENST00000477421 LINC00315P59091 139 aa8□□□□□ -1.13
COL27A1-204ENST00000477421 MIAQ16674 131 aa8□□□□□ -1.13
COL27A1-204ENST00000477421 UBE2D4Q9Y2X8 147 aa8□□□□□ -1.13
COL27A1-204ENST00000477421 TRAV13-2A0A0B4J235 113 aa8□□□□□ -1.13
COL27A1-204ENST00000477421 ATP5G1P05496 136 aa8□□□□□ -1.13
COL27A1-204ENST00000477421 POM121L12Q8N7R1 296 aa8□□□□□ -1.13
COL27A1-204ENST00000477421 TEX49A0A1B0GTD5 131 aa8□□□□□ -1.13
COL27A1-204ENST00000477421 LINC00694P0DN24 101 aa8□□□□□ -1.13
COL27A1-204ENST00000477421 C1orf158Q8N1D5 194 aa8□□□□□ -1.13
COL27A1-204ENST00000477421 PRO0255Q9UI72 69 aa7.99□□□□□ -1.13
COL27A1-204ENST00000477421 TRIAP1O43715 76 aa7.99□□□□□ -1.13
COL27A1-204ENST00000477421 RPL32P62910 135 aaKnown RBP7.99□□□□□ -1.13
COL27A1-204ENST00000477421 LY6G6DO95868 133 aa7.98□□□□□ -1.13
COL27A1-204ENST00000477421 LINC00269Q8N2A0 174 aa7.98□□□□□ -1.13
COL27A1-204ENST00000477421 SPART-AS1P0CW21 52 aa7.98□□□□□ -1.13
COL27A1-204ENST00000477421 UFSP1Q6NVU6 142 aa7.98□□□□□ -1.13
COL27A1-204ENST00000477421 LINC00526Q96FQ7 95 aa7.98□□□□□ -1.13
COL27A1-204ENST00000477421 PYGO1Q9Y3Y4 419 aa7.98□□□□□ -1.13
COL27A1-204ENST00000477421 COX7A2LO14548 114 aa7.97□□□□□ -1.13
COL27A1-204ENST00000477421 C5orf47Q569G3 176 aa7.97□□□□□ -1.13
COL27A1-204ENST00000477421 LINC00308Q8TCZ7 52 aa7.96□□□□□ -1.13
COL27A1-204ENST00000477421 TRBV6-8A0A0A6YYG3 113 aa7.96□□□□□ -1.14
COL27A1-204ENST00000477421 LECT2O14960 151 aa7.96□□□□□ -1.14
COL27A1-204ENST00000477421 IGKV2D-24A0A075B6R9 120 aa7.95□□□□□ -1.14
COL27A1-204ENST00000477421 A0A0B4J2C4 111 aa7.95□□□□□ -1.14
COL27A1-204ENST00000477421 TRBV10-2A0A0K0K1G8 114 aa7.95□□□□□ -1.14
COL27A1-204ENST00000477421 MT-ATP8P03928 68 aa7.95□□□□□ -1.14
COL27A1-204ENST00000477421 MRPS36P82909 103 aaKnown RBP7.95□□□□□ -1.14
COL27A1-204ENST00000477421 COX6A2Q02221 97 aa7.95□□□□□ -1.14
COL27A1-204ENST00000477421 ADAMTSL4-AS1Q5T5F5 129 aa7.95□□□□□ -1.14
COL27A1-204ENST00000477421 LINC00242Q5T6M2 205 aa7.95□□□□□ -1.14
COL27A1-204ENST00000477421 HILS1P60008 231 aa7.95□□□□□ -1.14
COL27A1-204ENST00000477421 CHCHD7Q9BUK0 85 aa7.95□□□□□ -1.14
COL27A1-204ENST00000477421 DCHS2Q6V1P9 2916 aa7.94□□□□□ -1.14
COL27A1-204ENST00000477421 WIPF1O43516 503 aa7.94□□□□□ -1.14
COL27A1-204ENST00000477421 UBE2D1P51668 147 aa7.94□□□□□ -1.14
COL27A1-204ENST00000477421 CRYBA4P53673 196 aa7.94□□□□□ -1.14
COL27A1-204ENST00000477421 FAM19A4Q96LR4 140 aa7.94□□□□□ -1.14
COL27A1-204ENST00000477421 INAFM2P0DMQ5 153 aa7.94□□□□□ -1.14
COL27A1-204ENST00000477421 NOTCH1P46531 2555 aa7.94□□□□□ -1.14
COL27A1-204ENST00000477421 UTP20O75691 2785 aaKnown RBP7.94□□□□□ -1.14
COL27A1-204ENST00000477421 UNC79Q9P2D8 2635 aa7.94□□□□□ -1.14
COL27A1-204ENST00000477421 NCR3O14931 201 aa7.93□□□□□ -1.14
COL27A1-204ENST00000477421 TRBV6-4A0A1B0GX49 114 aa7.93□□□□□ -1.14
COL27A1-204ENST00000477421 ITPR2Q14571 2701 aa7.92□□□□□ -1.14
COL27A1-204ENST00000477421 UBE2D3P61077 147 aa7.92□□□□□ -1.14
COL27A1-204ENST00000477421 UBE2D2P62837 147 aa7.92□□□□□ -1.14
COL27A1-204ENST00000477421 SPAG11BQ08648 103 aa7.92□□□□□ -1.14
COL27A1-204ENST00000477421 CDC42SE2Q9NRR3 84 aa7.92□□□□□ -1.14
COL27A1-204ENST00000477421 IGLV4-60A0A075B6I1 120 aa7.91□□□□□ -1.14
COL27A1-204ENST00000477421 NDUFA1O15239 70 aa7.91□□□□□ -1.14
COL27A1-204ENST00000477421 SLPIP03973 132 aa7.91□□□□□ -1.14
COL27A1-204ENST00000477421 OVOL2Q9BRP0 275 aa7.91□□□□□ -1.14
COL27A1-204ENST00000477421 SETXQ7Z333 2677 aaKnown RBP7.91□□□□□ -1.14
COL27A1-204ENST00000477421 NBEAL1Q6ZS30 2694 aa7.91□□□□□ -1.14
COL27A1-204ENST00000477421 NF1P21359 2839 aa7.91□□□□□ -1.14
COL27A1-204ENST00000477421 IGLV1-51P01701 117 aa7.91□□□□□ -1.14
COL27A1-204ENST00000477421 HAMPP81172 84 aa7.91□□□□□ -1.14
COL27A1-204ENST00000477421 REG3AQ06141 175 aa7.91□□□□□ -1.14
COL27A1-204ENST00000477421 HIGD2BQ4VC39 106 aa7.91□□□□□ -1.14
COL27A1-204ENST00000477421 CAMK2N2Q96S95 79 aa7.91□□□□□ -1.14
COL27A1-204ENST00000477421 B5MCH6 92 aa7.9□□□□□ -1.14
COL27A1-204ENST00000477421 UBE2DNLQ8IWF7 75 aa7.9□□□□□ -1.15
COL27A1-204ENST00000477421 CHCHD10Q8WYQ3 142 aaPredicted RBP7.9□□□□□ -1.15
COL27A1-204ENST00000477421 IGHV4-28A0A0C4DH34 117 aa7.89□□□□□ -1.15
COL27A1-204ENST00000477421 IGKV3D-7A0A0C4DH55 119 aa7.89□□□□□ -1.15
COL27A1-204ENST00000477421 PSCAO43653 123 aa7.89□□□□□ -1.15
COL27A1-204ENST00000477421 C11orf72Q8NBR9 251 aa7.89□□□□□ -1.15
COL27A1-204ENST00000477421 XAGE1AQ9HD64 81 aa7.89□□□□□ -1.15
COL27A1-204ENST00000477421 SPANXCQ9NY87 97 aa7.89□□□□□ -1.15
COL27A1-204ENST00000477421 HRNRQ86YZ3 2850 aaPredicted RBP7.89□□□□□ -1.15
COL27A1-204ENST00000477421 AMELXQ99217 191 aa7.89□□□□□ -1.15
COL27A1-204ENST00000477421 SMIM1B2RUZ4 78 aa7.88□□□□□ -1.15
COL27A1-204ENST00000477421 H3BT86 120 aa7.88□□□□□ -1.15
COL27A1-204ENST00000477421 STAB1Q9NY15 2570 aa7.88□□□□□ -1.15
COL27A1-204ENST00000477421 LINC01546A6NGU7 62 aa7.88□□□□□ -1.15
COL27A1-204ENST00000477421 PRB2P02812 416 aaPredicted RBP7.88□□□□□ -1.15
COL27A1-204ENST00000477421 ZNF575Q86XF7 245 aa7.88□□□□□ -1.15
COL27A1-204ENST00000477421 C14orf132Q9NPU4 83 aa7.88□□□□□ -1.15
COL27A1-204ENST00000477421 RPL18AQ02543 176 aaKnown RBP7.88□□□□□ -1.15
COL27A1-204ENST00000477421 TRBV30A0A0K0K1B3 111 aa7.87□□□□□ -1.15
COL27A1-204ENST00000477421 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.87□□□□□ -1.15
COL27A1-204ENST00000477421 ORMDL1Q9P0S3 153 aa7.87□□□□□ -1.15
COL27A1-204ENST00000477421 CSDC2Q9Y534 153 aaKnown RBP7.87□□□□□ -1.15
COL27A1-204ENST00000477421 SMG1Q96Q15 3661 aaKnown RBP7.87□□□□□ -1.15
COL27A1-204ENST00000477421 KLK9Q2XQG4 91 aa7.87□□□□□ -1.15
COL27A1-204ENST00000477421 DEFB105AQ8NG35 78 aa7.87□□□□□ -1.15
COL27A1-204ENST00000477421 LINC00959A0A1B0GUT2 108 aa7.86□□□□□ -1.15
COL27A1-204ENST00000477421 NKAPP1Q8N9T2 125 aa7.86□□□□□ -1.15
COL27A1-204ENST00000477421 CDIP1Q9H305 208 aa7.86□□□□□ -1.15
COL27A1-204ENST00000477421 BEAN1Q3B7T3 259 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms