RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 METTL1Q9UBP6 276 aaKnown RBP3.84□□□□□ -1.79
LRCH3-215ENST00000476664 APLNQ9ULZ1 77 aa3.84□□□□□ -1.79
LRCH3-215ENST00000476664 LRCOL1A6NCL2 159 aa3.83□□□□□ -1.8
LRCH3-215ENST00000476664 TRACP01848 142 aa3.83□□□□□ -1.8
LRCH3-215ENST00000476664 CTSGP08311 255 aa3.83□□□□□ -1.8
LRCH3-215ENST00000476664 AKAIN1P0CW23 69 aa3.83□□□□□ -1.8
LRCH3-215ENST00000476664 PYYP10082 97 aa3.83□□□□□ -1.8
LRCH3-215ENST00000476664 SLC25A4P12235 298 aa3.83□□□□□ -1.8
LRCH3-215ENST00000476664 MIFP14174 115 aa3.83□□□□□ -1.8
LRCH3-215ENST00000476664 ROMO1P60602 79 aa3.83□□□□□ -1.8
LRCH3-215ENST00000476664 PCBD1P61457 104 aa3.83□□□□□ -1.8
LRCH3-215ENST00000476664 ZNF563Q8TA94 476 aa3.83□□□□□ -1.8
LRCH3-215ENST00000476664 CLEC2BQ92478 149 aa3.83□□□□□ -1.8
LRCH3-215ENST00000476664 NAA38Q9BRA0 125 aaKnown RBP3.83□□□□□ -1.8
LRCH3-215ENST00000476664 SCN3BQ9NY72 215 aa3.83□□□□□ -1.8
LRCH3-215ENST00000476664 TNXBP22105 4242 aa3.83□□□□□ -1.8
LRCH3-215ENST00000476664 TRBV20-1A0A075B6N2 111 aa3.82□□□□□ -1.8
LRCH3-215ENST00000476664 ZNF737O75373 536 aa3.82□□□□□ -1.8
LRCH3-215ENST00000476664 GYPAP02724 150 aa3.82□□□□□ -1.8
LRCH3-215ENST00000476664 SMR3BP02814 79 aaPredicted RBP3.82□□□□□ -1.8
LRCH3-215ENST00000476664 ETV6P41212 452 aa3.82□□□□□ -1.8
LRCH3-215ENST00000476664 SS18Q15532 418 aa3.82□□□□□ -1.8
LRCH3-215ENST00000476664 ASB16-AS1Q495Z4 193 aa3.82□□□□□ -1.8
LRCH3-215ENST00000476664 CLLU1Q5K131 121 aa3.82□□□□□ -1.8
LRCH3-215ENST00000476664 C10orf111Q8N326 155 aa3.82□□□□□ -1.8
LRCH3-215ENST00000476664 PP6455Q8WZ26 134 aa3.82□□□□□ -1.8
LRCH3-215ENST00000476664 C20orf166-AS1Q96NR2 134 aa3.82□□□□□ -1.8
LRCH3-215ENST00000476664 FKBP11Q9NYL4 201 aa3.82□□□□□ -1.8
LRCH3-215ENST00000476664 TRAV1-1A0A0B4J248 108 aa3.81□□□□□ -1.8
LRCH3-215ENST00000476664 M0R1W7 72 aa3.81□□□□□ -1.8
LRCH3-215ENST00000476664 GNG4P50150 75 aa3.81□□□□□ -1.8
LRCH3-215ENST00000476664 MEIG1Q5JSS6 88 aa3.81□□□□□ -1.8
LRCH3-215ENST00000476664 C1orf134Q5TEV5 83 aa3.81□□□□□ -1.8
LRCH3-215ENST00000476664 OR5AS1Q8N127 324 aa3.81□□□□□ -1.8
LRCH3-215ENST00000476664 Q8N814 137 aa3.81□□□□□ -1.8
LRCH3-215ENST00000476664 OR5AK2Q8NH90 309 aa3.81□□□□□ -1.8
LRCH3-215ENST00000476664 CIB3Q96Q77 187 aaPredicted RBP3.81□□□□□ -1.8
LRCH3-215ENST00000476664 SLC50A1Q9BRV3 221 aa3.81□□□□□ -1.8
LRCH3-215ENST00000476664 MPC1Q9Y5U8 109 aa3.81□□□□□ -1.8
LRCH3-215ENST00000476664 IGLV10-54A0A075B6I4 117 aa3.8□□□□□ -1.8
LRCH3-215ENST00000476664 IGLV1-51P01701 117 aa3.8□□□□□ -1.8
LRCH3-215ENST00000476664 CRPP02741 224 aa3.8□□□□□ -1.8
LRCH3-215ENST00000476664 CDK6Q00534 326 aa3.8□□□□□ -1.8
LRCH3-215ENST00000476664 CIRBPQ14011 172 aaKnown RBP3.8□□□□□ -1.8
LRCH3-215ENST00000476664 LINC01545Q5VT33 79 aa3.8□□□□□ -1.8
LRCH3-215ENST00000476664 KCNRGQ8N5I3 272 aa3.8□□□□□ -1.8
LRCH3-215ENST00000476664 COPS9Q8WXC6 57 aa3.8□□□□□ -1.8
LRCH3-215ENST00000476664 CST9LQ9H4G1 147 aa3.8□□□□□ -1.8
LRCH3-215ENST00000476664 IGKV2D-26A0A0A0MRZ7 120 aa3.79□□□□□ -1.8
LRCH3-215ENST00000476664 IBA57-AS1B1ANH7 110 aa3.79□□□□□ -1.8
LRCH3-215ENST00000476664 FNDC10F2Z333 226 aa3.79□□□□□ -1.8
LRCH3-215ENST00000476664 CD3DP04234 171 aa3.79□□□□□ -1.8
LRCH3-215ENST00000476664 CKS2P33552 79 aa3.79□□□□□ -1.8
LRCH3-215ENST00000476664 Q6ZTI0 123 aa3.79□□□□□ -1.8
LRCH3-215ENST00000476664 TMEM254Q8TBM7 123 aa3.79□□□□□ -1.8
LRCH3-215ENST00000476664 SFT2D1Q8WV19 159 aa3.79□□□□□ -1.8
LRCH3-215ENST00000476664 C4orf3Q8WVX3 66 aa3.79□□□□□ -1.8
LRCH3-215ENST00000476664 CYTL1Q9NRR1 136 aa3.79□□□□□ -1.8
LRCH3-215ENST00000476664 PRO2289Q9P1D8 64 aa3.79□□□□□ -1.8
LRCH3-215ENST00000476664 KAAG1Q9UBP8 84 aa3.79□□□□□ -1.8
LRCH3-215ENST00000476664 LOC100130705A0A1B0GUX0 176 aa3.78□□□□□ -1.8
LRCH3-215ENST00000476664 IGLV6-57P01721 117 aa3.78□□□□□ -1.8
LRCH3-215ENST00000476664 CD14P08571 375 aa3.78□□□□□ -1.8
LRCH3-215ENST00000476664 IFI6P09912 130 aa3.78□□□□□ -1.8
LRCH3-215ENST00000476664 LINC00315P59091 139 aa3.78□□□□□ -1.8
LRCH3-215ENST00000476664 PPP3R1P63098 170 aa3.78□□□□□ -1.8
LRCH3-215ENST00000476664 RAB37Q96AX2 223 aa3.78□□□□□ -1.8
LRCH3-215ENST00000476664 DPH3Q96FX2 82 aa3.78□□□□□ -1.8
LRCH3-215ENST00000476664 SPANXDQ9BXN6 97 aa3.78□□□□□ -1.8
LRCH3-215ENST00000476664 LSM2Q9Y333 95 aaKnown RBP3.78□□□□□ -1.8
LRCH3-215ENST00000476664 LHFPL6Q9Y693 200 aa3.78□□□□□ -1.8
LRCH3-215ENST00000476664 KRTAP13-2Q52LG2 175 aa3.77□□□□□ -1.81
LRCH3-215ENST00000476664 Q5BKY6 102 aa3.77□□□□□ -1.81
LRCH3-215ENST00000476664 PRR9Q5T870 116 aa3.77□□□□□ -1.81
LRCH3-215ENST00000476664 CST11Q9H112 138 aa3.77□□□□□ -1.81
LRCH3-215ENST00000476664 E7EUB6 86 aa3.76□□□□□ -1.81
LRCH3-215ENST00000476664 SNAPC5O75971 98 aa3.76□□□□□ -1.81
LRCH3-215ENST00000476664 ZNF846Q147U1 533 aa3.76□□□□□ -1.81
LRCH3-215ENST00000476664 SH2D6Q7Z4S9 175 aa3.76□□□□□ -1.81
LRCH3-215ENST00000476664 OTOSQ8NHW6 89 aa3.76□□□□□ -1.81
LRCH3-215ENST00000476664 Q96M85 177 aa3.76□□□□□ -1.81
LRCH3-215ENST00000476664 HILPDAQ9Y5L2 63 aa3.76□□□□□ -1.81
LRCH3-215ENST00000476664 TRAV12-2A0A075B6T6 113 aa3.75□□□□□ -1.81
LRCH3-215ENST00000476664 IFITM5A6NNB3 132 aa3.75□□□□□ -1.81
LRCH3-215ENST00000476664 M0R129 80 aa3.75□□□□□ -1.81
LRCH3-215ENST00000476664 M0R2P5 195 aa3.75□□□□□ -1.81
LRCH3-215ENST00000476664 HMGN2P05204 90 aaKnown RBP3.75□□□□□ -1.81
LRCH3-215ENST00000476664 ASAH2BP0C7U1 165 aa3.75□□□□□ -1.81
LRCH3-215ENST00000476664 HIST1H1DP16402 221 aaKnown RBP3.75□□□□□ -1.81
LRCH3-215ENST00000476664 ARPINQ7Z6K5 226 aa3.75□□□□□ -1.81
LRCH3-215ENST00000476664 C9orf62Q8N4C0 152 aa3.75□□□□□ -1.81
LRCH3-215ENST00000476664 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
LRCH3-215ENST00000476664 ZFP30Q9Y2G7 519 aa3.75□□□□□ -1.81
LRCH3-215ENST00000476664 A0A087WSZ3 146 aa3.74□□□□□ -1.81
LRCH3-215ENST00000476664 ZNF705FA8MVS1 300 aaPredicted RBP3.74□□□□□ -1.81
LRCH3-215ENST00000476664 ZNF736B4DX44 427 aaPredicted RBP3.74□□□□□ -1.81
LRCH3-215ENST00000476664 HYPMO75409 117 aa3.74□□□□□ -1.81
LRCH3-215ENST00000476664 OR2T2Q6IF00 324 aa3.74□□□□□ -1.81
LRCH3-215ENST00000476664 C8orf59Q8N0T1 100 aaPredicted RBP3.74□□□□□ -1.81
LRCH3-215ENST00000476664 DEFB104AQ8WTQ1 72 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms