RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 CCL25O15444 150 aa9.45□□□□□ -0.9
CCNL1-217ENST00000476367 XCL1P47992 114 aa9.45□□□□□ -0.9
CCNL1-217ENST00000476367 COX6A2Q02221 97 aa9.45□□□□□ -0.9
CCNL1-217ENST00000476367 LINC00242Q5T6M2 205 aa9.45□□□□□ -0.9
CCNL1-217ENST00000476367 IGLV5-52A0A0A0MRZ9 124 aa9.45□□□□□ -0.9
CCNL1-217ENST00000476367 LINC01549A6NIU2 74 aa9.45□□□□□ -0.9
CCNL1-217ENST00000476367 PGPEP1Q9NXJ5 209 aa9.45□□□□□ -0.9
CCNL1-217ENST00000476367 IFITM10A6NMD0 228 aa9.44□□□□□ -0.9
CCNL1-217ENST00000476367 NDUFA6P56556 154 aa9.44□□□□□ -0.9
CCNL1-217ENST00000476367 SS18Q15532 418 aa9.44□□□□□ -0.9
CCNL1-217ENST00000476367 CDPF1Q6NVV7 123 aa9.44□□□□□ -0.9
CCNL1-217ENST00000476367 TEX43Q6ZNM6 134 aa9.44□□□□□ -0.9
CCNL1-217ENST00000476367 FAM19A3Q7Z5A8 133 aa9.44□□□□□ -0.9
CCNL1-217ENST00000476367 VCX2Q9H322 139 aa9.44□□□□□ -0.9
CCNL1-217ENST00000476367 CST9LQ9H4G1 147 aa9.44□□□□□ -0.9
CCNL1-217ENST00000476367 IGHV3OR16-9A0A0B4J2B5 98 aa9.43□□□□□ -0.9
CCNL1-217ENST00000476367 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.43□□□□□ -0.9
CCNL1-217ENST00000476367 CD164L2Q6UWJ8 174 aa9.42□□□□□ -0.9
CCNL1-217ENST00000476367 LINC00518Q8N0U6 118 aa9.42□□□□□ -0.9
CCNL1-217ENST00000476367 NTN5Q8WTR8 489 aaPredicted RBP9.42□□□□□ -0.9
CCNL1-217ENST00000476367 AKR1D1P51857 326 aa9.42□□□□□ -0.9
CCNL1-217ENST00000476367 C14orf177Q52M58 125 aa9.42□□□□□ -0.9
CCNL1-217ENST00000476367 C15orf56Q8N910 161 aa9.42□□□□□ -0.9
CCNL1-217ENST00000476367 IFI27L1Q96BM0 104 aa9.42□□□□□ -0.9
CCNL1-217ENST00000476367 A0A0J9YXV3 536 aa9.41□□□□□ -0.9
CCNL1-217ENST00000476367 ATP5LO75964 103 aa9.41□□□□□ -0.9
CCNL1-217ENST00000476367 PMVKQ15126 192 aa9.41□□□□□ -0.9
CCNL1-217ENST00000476367 Q6ZN92 141 aa9.41□□□□□ -0.9
CCNL1-217ENST00000476367 LRP1BQ9NZR2 4599 aa9.4□□□□□ -0.9
CCNL1-217ENST00000476367 IGLV4-69A0A075B6H9 119 aa9.4□□□□□ -0.9
CCNL1-217ENST00000476367 LEPROTL1O95214 131 aa9.4□□□□□ -0.9
CCNL1-217ENST00000476367 PRSS1P07477 247 aa9.4□□□□□ -0.9
CCNL1-217ENST00000476367 FABP4P15090 132 aa9.39□□□□□ -0.91
CCNL1-217ENST00000476367 PAPPA-AS1Q5QFB9 102 aa9.39□□□□□ -0.91
CCNL1-217ENST00000476367 KIAA1109Q2LD37 5005 aa9.38□□□□□ -0.91
CCNL1-217ENST00000476367 hDV102S1A0JD36 115 aa9.38□□□□□ -0.91
CCNL1-217ENST00000476367 SMIM6P0DI80 62 aa9.38□□□□□ -0.91
CCNL1-217ENST00000476367 GCSHP23434 173 aa9.38□□□□□ -0.91
CCNL1-217ENST00000476367 LINC01620Q4KN68 170 aa9.38□□□□□ -0.91
CCNL1-217ENST00000476367 C5orf38Q86SI9 138 aa9.38□□□□□ -0.91
CCNL1-217ENST00000476367 C2orf88Q9BSF0 95 aa9.38□□□□□ -0.91
CCNL1-217ENST00000476367 SLPIP03973 132 aa9.38□□□□□ -0.91
CCNL1-217ENST00000476367 KRTAP10-1P60331 282 aa9.38□□□□□ -0.91
CCNL1-217ENST00000476367 HIGD2BQ4VC39 106 aa9.38□□□□□ -0.91
CCNL1-217ENST00000476367 IGLV5-45A0A087WSX0 123 aa9.37□□□□□ -0.91
CCNL1-217ENST00000476367 HIST3H2BBQ8N257 126 aa9.37□□□□□ -0.91
CCNL1-217ENST00000476367 CDKN2A-AS1Q9UH64 79 aa9.37□□□□□ -0.91
CCNL1-217ENST00000476367 A0A087WZ39 114 aa9.36□□□□□ -0.91
CCNL1-217ENST00000476367 TRAV12-1A0A0B4J245 112 aa9.36□□□□□ -0.91
CCNL1-217ENST00000476367 TINCRA0A1B0GVN0 87 aa9.36□□□□□ -0.91
CCNL1-217ENST00000476367 COX7A2LO14548 114 aa9.36□□□□□ -0.91
CCNL1-217ENST00000476367 IGLC3P0DOY3 106 aa9.36□□□□□ -0.91
CCNL1-217ENST00000476367 ODF1Q14990 250 aa9.36□□□□□ -0.91
CCNL1-217ENST00000476367 CFAP161Q6P656 301 aa9.36□□□□□ -0.91
CCNL1-217ENST00000476367 MALP21145 153 aa9.35□□□□□ -0.91
CCNL1-217ENST00000476367 PACRGQ96M98 296 aaPredicted RBP9.35□□□□□ -0.91
CCNL1-217ENST00000476367 C11orf86A6NJI1 115 aa9.34□□□□□ -0.91
CCNL1-217ENST00000476367 LINC00526Q96FQ7 95 aa9.34□□□□□ -0.91
CCNL1-217ENST00000476367 C12orf57Q99622 126 aa9.34□□□□□ -0.91
CCNL1-217ENST00000476367 MRPL35Q9NZE8 188 aaKnown RBP9.34□□□□□ -0.91
CCNL1-217ENST00000476367 HSPB8Q9UJY1 196 aa9.34□□□□□ -0.91
CCNL1-217ENST00000476367 GVQW2A0A096LPI5 108 aaPredicted RBP9.34□□□□□ -0.91
CCNL1-217ENST00000476367 IGHV1-58A0A0C4DH39 117 aa9.34□□□□□ -0.91
CCNL1-217ENST00000476367 S100A2P29034 98 aa9.34□□□□□ -0.91
CCNL1-217ENST00000476367 HIST1H2BLQ99880 126 aa9.34□□□□□ -0.91
CCNL1-217ENST00000476367 HERVK_113P63121 156 aa9.33□□□□□ -0.92
CCNL1-217ENST00000476367 IGHV3-64A0A075B6Q5 118 aa9.32□□□□□ -0.92
CCNL1-217ENST00000476367 C3orf79P0CE67 100 aa9.32□□□□□ -0.92
CCNL1-217ENST00000476367 ZNF22P17026 224 aaPredicted RBP9.32□□□□□ -0.92
CCNL1-217ENST00000476367 KIAA0087Q14695 138 aa9.32□□□□□ -0.92
CCNL1-217ENST00000476367 CHTOPQ9Y3Y2 248 aaKnown RBP9.32□□□□□ -0.92
CCNL1-217ENST00000476367 HERC2O95714 4834 aa9.31□□□□□ -0.92
CCNL1-217ENST00000476367 SMIM1B2RUZ4 78 aa9.31□□□□□ -0.92
CCNL1-217ENST00000476367 F8VRH5 84 aa9.31□□□□□ -0.92
CCNL1-217ENST00000476367 H0Y8G0 127 aa9.31□□□□□ -0.92
CCNL1-217ENST00000476367 SYS1-DBNDD2H3BUS1 97 aa9.31□□□□□ -0.92
CCNL1-217ENST00000476367 PMCHL2Q9BQD1 86 aa9.31□□□□□ -0.92
CCNL1-217ENST00000476367 CHAC1Q9BUX1 264 aa9.31□□□□□ -0.92
CCNL1-217ENST00000476367 APOBP04114 4563 aaKnown RBP9.31□□□□□ -0.92
CCNL1-217ENST00000476367 DNAH8Q96JB1 4490 aa9.31□□□□□ -0.92
CCNL1-217ENST00000476367 CDK2AP2O75956 126 aa9.31□□□□□ -0.92
CCNL1-217ENST00000476367 CNBPP62633 177 aaKnown RBP9.31□□□□□ -0.92
CCNL1-217ENST00000476367 SEC11AP67812 179 aa9.31□□□□□ -0.92
CCNL1-217ENST00000476367 HAMPP81172 84 aa9.31□□□□□ -0.92
CCNL1-217ENST00000476367 LINC01561Q8N1V8 128 aa9.31□□□□□ -0.92
CCNL1-217ENST00000476367 GEMIN7Q9H840 131 aaKnown RBP9.31□□□□□ -0.92
CCNL1-217ENST00000476367 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.3□□□□□ -0.92
CCNL1-217ENST00000476367 ZNF561-AS1K7EIQ3 104 aa9.3□□□□□ -0.92
CCNL1-217ENST00000476367 APOMO95445 188 aa9.3□□□□□ -0.92
CCNL1-217ENST00000476367 LINC00469Q8N7U9 141 aa9.3□□□□□ -0.92
CCNL1-217ENST00000476367 RYR1P21817 5038 aa9.3□□□□□ -0.92
CCNL1-217ENST00000476367 LINC01545Q5VT33 79 aa9.29□□□□□ -0.92
CCNL1-217ENST00000476367 C9orf163Q8N9P6 203 aa9.29□□□□□ -0.92
CCNL1-217ENST00000476367 ORAOV1Q8WV07 137 aa9.29□□□□□ -0.92
CCNL1-217ENST00000476367 MAP1LC3CQ9BXW4 147 aa9.29□□□□□ -0.92
CCNL1-217ENST00000476367 FAM30AQ9NZY2 134 aa9.29□□□□□ -0.92
CCNL1-217ENST00000476367 SPINK8P0C7L1 97 aa9.28□□□□□ -0.92
CCNL1-217ENST00000476367 SPAG11BQ08648 103 aa9.28□□□□□ -0.92
CCNL1-217ENST00000476367 IGLV5-39A0A0G2JS06 123 aa9.27□□□□□ -0.92
CCNL1-217ENST00000476367 OR10D4PQ8NGN7 298 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms