RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 C2orf88Q9BSF0 95 aa3.55□□□□□ -1.84
SSR3-206ENST00000476217 DAZ3Q9NR90 486 aaKnown RBP3.55□□□□□ -1.84
SSR3-206ENST00000476217 Q9UF83 564 aa3.55□□□□□ -1.84
SSR3-206ENST00000476217 HSPB8Q9UJY1 196 aa3.55□□□□□ -1.84
SSR3-206ENST00000476217 CYSLTR1Q9Y271 337 aa3.55□□□□□ -1.84
SSR3-206ENST00000476217 TRAV26-1A0A087WT03 109 aa3.54□□□□□ -1.84
SSR3-206ENST00000476217 DDTP30046 118 aa3.54□□□□□ -1.84
SSR3-206ENST00000476217 UBE2D3P61077 147 aa3.54□□□□□ -1.84
SSR3-206ENST00000476217 UBE2D2P62837 147 aa3.54□□□□□ -1.84
SSR3-206ENST00000476217 C2orf66Q6UXQ4 117 aa3.54□□□□□ -1.84
SSR3-206ENST00000476217 MAP1LC3CQ9BXW4 147 aa3.54□□□□□ -1.84
SSR3-206ENST00000476217 ICOSQ9Y6W8 199 aa3.54□□□□□ -1.84
SSR3-206ENST00000476217 A0A096LNJ9 63 aa3.53□□□□□ -1.84
SSR3-206ENST00000476217 DEFB131BA0A096LNP1 70 aa3.53□□□□□ -1.84
SSR3-206ENST00000476217 A0A096LPF7 62 aa3.53□□□□□ -1.84
SSR3-206ENST00000476217 FAM168BA1KXE4 195 aa3.53□□□□□ -1.84
SSR3-206ENST00000476217 C20orf202A1L168 122 aa3.53□□□□□ -1.84
SSR3-206ENST00000476217 LINC01549A6NIU2 74 aa3.53□□□□□ -1.84
SSR3-206ENST00000476217 ATP5LO75964 103 aa3.53□□□□□ -1.84
SSR3-206ENST00000476217 TMEM97Q5BJF2 176 aa3.53□□□□□ -1.84
SSR3-206ENST00000476217 Q6ZN92 141 aa3.53□□□□□ -1.84
SSR3-206ENST00000476217 LINC00173Q6ZV60 143 aa3.53□□□□□ -1.84
SSR3-206ENST00000476217 ATP6V0E2Q8NHE4 81 aa3.53□□□□□ -1.84
SSR3-206ENST00000476217 TOMM6Q96B49 74 aa3.53□□□□□ -1.84
SSR3-206ENST00000476217 IFI27L1Q96BM0 104 aa3.53□□□□□ -1.84
SSR3-206ENST00000476217 VSIG2Q96IQ7 327 aa3.53□□□□□ -1.84
SSR3-206ENST00000476217 SCGB3A1Q96QR1 104 aa3.53□□□□□ -1.84
SSR3-206ENST00000476217 TRBV25-1A0A075B6N4 114 aa3.52□□□□□ -1.85
SSR3-206ENST00000476217 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.52□□□□□ -1.85
SSR3-206ENST00000476217 TRAV10A0A0B4J240 114 aa3.52□□□□□ -1.85
SSR3-206ENST00000476217 IGKV2-29A2NJV5 120 aaPredicted RBP3.52□□□□□ -1.85
SSR3-206ENST00000476217 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.52□□□□□ -1.85
SSR3-206ENST00000476217 SYS1-DBNDD2H3BUS1 97 aa3.52□□□□□ -1.85
SSR3-206ENST00000476217 UBE2L6O14933 153 aa3.52□□□□□ -1.85
SSR3-206ENST00000476217 C3orf79P0CE67 100 aa3.52□□□□□ -1.85
SSR3-206ENST00000476217 LINC00694P0DN24 101 aa3.52□□□□□ -1.85
SSR3-206ENST00000476217 RPL39P62891 51 aaKnown RBP3.52□□□□□ -1.85
SSR3-206ENST00000476217 SMAGPQ0VAQ4 97 aa3.52□□□□□ -1.85
SSR3-206ENST00000476217 MRPL23Q16540 153 aaKnown RBP3.52□□□□□ -1.85
SSR3-206ENST00000476217 ERASQ7Z444 233 aa3.52□□□□□ -1.85
SSR3-206ENST00000476217 C20orf203Q8NBC4 194 aa3.52□□□□□ -1.85
SSR3-206ENST00000476217 C14orf144Q96I85 54 aa3.52□□□□□ -1.85
SSR3-206ENST00000476217 TMEM243Q9BU79 118 aa3.52□□□□□ -1.85
SSR3-206ENST00000476217 DHRS4-AS1Q9P1J3 65 aa3.52□□□□□ -1.85
SSR3-206ENST00000476217 NOTCH1P46531 2555 aa3.52□□□□□ -1.85
SSR3-206ENST00000476217 NBEAL2Q6ZNJ1 2754 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 DNHD1Q96M86 4753 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 TRAV9-2A0A087WT02 112 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 TRBV6-8A0A0A6YYG3 113 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 H3BNG1 76 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 AMMECR1LQ6DCA0 310 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 NTM-AS1Q6ZSK4 140 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 TMEM141Q96I45 108 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 TMEM101Q96IK0 257 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 TIMM17AQ99595 171 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 PMCHL2Q9BQD1 86 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 CHCHD7Q9BUK0 85 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 GTSF1LQ9H1H1 148 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 Q9HAA7 133 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 SPANXA1Q9NS26 97 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 MGAM2Q2M2H8 2515 aa3.51□□□□□ -1.85
SSR3-206ENST00000476217 NBEAL1Q6ZS30 2694 aa3.5□□□□□ -1.85
SSR3-206ENST00000476217 IGIPA6NJ69 53 aa3.5□□□□□ -1.85
SSR3-206ENST00000476217 CEMP1Q6PRD7 247 aaPredicted RBP3.5□□□□□ -1.85
SSR3-206ENST00000476217 TEX43Q6ZNM6 134 aa3.5□□□□□ -1.85
SSR3-206ENST00000476217 ATOH7Q8N100 152 aa3.5□□□□□ -1.85
SSR3-206ENST00000476217 OR5A1Q8NGJ0 315 aa3.5□□□□□ -1.85
SSR3-206ENST00000476217 BAALCQ8WXS3 180 aa3.5□□□□□ -1.85
SSR3-206ENST00000476217 UBE2D4Q9Y2X8 147 aa3.5□□□□□ -1.85
SSR3-206ENST00000476217 TRAV12-1A0A0B4J245 112 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 IGLL5B9A064 214 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 HSBP1L1C9JCN9 74 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 TMEM262E9PQX1 116 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 FGF6P10767 208 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 ZNF25P17030 456 aaPredicted RBP3.49□□□□□ -1.85
SSR3-206ENST00000476217 PMVKQ15126 192 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 RNASE13Q5GAN3 156 aaKnown RBP3.49□□□□□ -1.85
SSR3-206ENST00000476217 LELP1Q5T871 98 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 LINC01545Q5VT33 79 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 LGALS9CQ6DKI2 356 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 Q6ZUT4 128 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 SPATA12Q7Z6I5 190 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 ZNF664Q8N3J9 261 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 C15orf53Q8NAA6 179 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 VAMP8Q9BV40 100 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 TIMM21Q9BVV7 248 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 VCX2Q9H322 139 aa3.49□□□□□ -1.85
SSR3-206ENST00000476217 CHTOPQ9Y3Y2 248 aaKnown RBP3.49□□□□□ -1.85
SSR3-206ENST00000476217 A0A087WX48 190 aa3.48□□□□□ -1.85
SSR3-206ENST00000476217 TRAV8-6A0A0B4J262 113 aa3.48□□□□□ -1.85
SSR3-206ENST00000476217 NUPR2A6NF83 97 aa3.48□□□□□ -1.85
SSR3-206ENST00000476217 F8VRH5 84 aa3.48□□□□□ -1.85
SSR3-206ENST00000476217 M0R143 59 aa3.48□□□□□ -1.85
SSR3-206ENST00000476217 DPM2O94777 84 aa3.48□□□□□ -1.85
SSR3-206ENST00000476217 IGKCP01834 107 aa3.48□□□□□ -1.85
SSR3-206ENST00000476217 PLNP26678 52 aa3.48□□□□□ -1.85
SSR3-206ENST00000476217 MRPS36P82909 103 aaKnown RBP3.48□□□□□ -1.85
SSR3-206ENST00000476217 LYPD5Q6UWN5 251 aa3.48□□□□□ -1.85
SSR3-206ENST00000476217 Q8N976 141 aa3.48□□□□□ -1.85
SSR3-206ENST00000476217 CST9LQ9H4G1 147 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms