RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 A0A0U1RRA0 63 aa9.94□□□□□ -0.82
UBXN11-214ENST00000475591 TRBV6-4A0A1B0GX49 114 aa9.94□□□□□ -0.82
UBXN11-214ENST00000475591 SMIM1B2RUZ4 78 aa9.94□□□□□ -0.82
UBXN11-214ENST00000475591 UBE2L6O14933 153 aa9.94□□□□□ -0.82
UBXN11-214ENST00000475591 CSDC2Q9Y534 153 aaKnown RBP9.94□□□□□ -0.82
UBXN11-214ENST00000475591 GAGE6Q13070 117 aa9.93□□□□□ -0.82
UBXN11-214ENST00000475591 Q1RN00 199 aa9.93□□□□□ -0.82
UBXN11-214ENST00000475591 CITED1Q99966 193 aa9.93□□□□□ -0.82
UBXN11-214ENST00000475591 Q9H8V8 135 aa9.93□□□□□ -0.82
UBXN11-214ENST00000475591 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.93□□□□□ -0.82
UBXN11-214ENST00000475591 IGLV5-39A0A0G2JS06 123 aa9.93□□□□□ -0.82
UBXN11-214ENST00000475591 SS18L2Q9UHA2 77 aa9.93□□□□□ -0.82
UBXN11-214ENST00000475591 TRRAPQ9Y4A5 3859 aa9.93□□□□□ -0.82
UBXN11-214ENST00000475591 IGKV3OR2-268A0A0C4DH90 116 aa9.92□□□□□ -0.82
UBXN11-214ENST00000475591 NDUFA1O15239 70 aa9.92□□□□□ -0.82
UBXN11-214ENST00000475591 LYRM7Q5U5X0 104 aa9.92□□□□□ -0.82
UBXN11-214ENST00000475591 FAM19A3Q7Z5A8 133 aa9.91□□□□□ -0.82
UBXN11-214ENST00000475591 NSD1Q96L73 2696 aaPredicted RBP9.91□□□□□ -0.82
UBXN11-214ENST00000475591 IGLV4-60A0A075B6I1 120 aa9.91□□□□□ -0.82
UBXN11-214ENST00000475591 F5H768 121 aa9.91□□□□□ -0.82
UBXN11-214ENST00000475591 TRBV20-1A0A075B6N2 111 aa9.9□□□□□ -0.83
UBXN11-214ENST00000475591 TRIAP1O43715 76 aa9.9□□□□□ -0.83
UBXN11-214ENST00000475591 SCGB1A1P11684 91 aa9.9□□□□□ -0.83
UBXN11-214ENST00000475591 X6R8D5 127 aa9.9□□□□□ -0.83
UBXN11-214ENST00000475591 TRBV6-8A0A0A6YYG3 113 aa9.88□□□□□ -0.83
UBXN11-214ENST00000475591 DEFB4AO15263 64 aa9.88□□□□□ -0.83
UBXN11-214ENST00000475591 CHCHD5Q9BSY4 110 aa9.88□□□□□ -0.83
UBXN11-214ENST00000475591 HIVEP1P15822 2718 aa9.88□□□□□ -0.83
UBXN11-214ENST00000475591 TIMM17BO60830 172 aa9.87□□□□□ -0.83
UBXN11-214ENST00000475591 FOXI1Q12951 378 aa9.87□□□□□ -0.83
UBXN11-214ENST00000475591 SIGMAR1Q99720 223 aa9.87□□□□□ -0.83
UBXN11-214ENST00000475591 A0A096LPF7 62 aa9.87□□□□□ -0.83
UBXN11-214ENST00000475591 C9JAW5 83 aa9.87□□□□□ -0.83
UBXN11-214ENST00000475591 PRIMA1Q86XR5 153 aa9.87□□□□□ -0.83
UBXN11-214ENST00000475591 SOSTDC1Q6X4U4 206 aa9.86□□□□□ -0.83
UBXN11-214ENST00000475591 CARD19Q96LW7 228 aa9.86□□□□□ -0.83
UBXN11-214ENST00000475591 GYPEP15421 78 aa9.86□□□□□ -0.83
UBXN11-214ENST00000475591 KIR2DL5BQ8NHK3 375 aa9.86□□□□□ -0.83
UBXN11-214ENST00000475591 LINC00308Q8TCZ7 52 aa9.86□□□□□ -0.83
UBXN11-214ENST00000475591 ICOSQ9Y6W8 199 aa9.86□□□□□ -0.83
UBXN11-214ENST00000475591 J3QR89 54 aa9.85□□□□□ -0.83
UBXN11-214ENST00000475591 DEFB135Q30KP9 77 aa9.85□□□□□ -0.83
UBXN11-214ENST00000475591 ANKRD29Q8N6D5 301 aa9.85□□□□□ -0.83
UBXN11-214ENST00000475591 GAGE12HA6NDE8 117 aa9.85□□□□□ -0.83
UBXN11-214ENST00000475591 RPL13AP40429 203 aaKnown RBP9.85□□□□□ -0.83
UBXN11-214ENST00000475591 CIRBPQ14011 172 aaKnown RBP9.85□□□□□ -0.83
UBXN11-214ENST00000475591 MEIG1Q5JSS6 88 aa9.85□□□□□ -0.83
UBXN11-214ENST00000475591 LINC00612Q8N6U2 182 aa9.85□□□□□ -0.83
UBXN11-214ENST00000475591 TRBV30A0A0K0K1B3 111 aa9.84□□□□□ -0.83
UBXN11-214ENST00000475591 SLC25A20O43772 301 aa9.84□□□□□ -0.83
UBXN11-214ENST00000475591 C9orf66Q5T8R8 295 aa9.84□□□□□ -0.83
UBXN11-214ENST00000475591 H7C423 109 aa9.84□□□□□ -0.83
UBXN11-214ENST00000475591 IFITM1P13164 125 aa9.84□□□□□ -0.83
UBXN11-214ENST00000475591 FAM222AQ5U5X8 452 aa9.84□□□□□ -0.83
UBXN11-214ENST00000475591 TEN1Q86WV5 123 aa9.84□□□□□ -0.83
UBXN11-214ENST00000475591 ATP6V0E2Q8NHE4 81 aa9.84□□□□□ -0.83
UBXN11-214ENST00000475591 TOMM7Q9P0U1 55 aa9.84□□□□□ -0.83
UBXN11-214ENST00000475591 CLEC2BQ92478 149 aa9.83□□□□□ -0.84
UBXN11-214ENST00000475591 ATRQ13535 2644 aa9.82□□□□□ -0.84
UBXN11-214ENST00000475591 ATXN8Q156A1 80 aa9.82□□□□□ -0.84
UBXN11-214ENST00000475591 LINC01620Q4KN68 170 aa9.82□□□□□ -0.84
UBXN11-214ENST00000475591 CLPSL2Q6UWE3 100 aa9.81□□□□□ -0.84
UBXN11-214ENST00000475591 C5orf38Q86SI9 138 aa9.81□□□□□ -0.84
UBXN11-214ENST00000475591 RNF183Q96D59 192 aa9.81□□□□□ -0.84
UBXN11-214ENST00000475591 SPATA25Q9BR10 227 aa9.81□□□□□ -0.84
UBXN11-214ENST00000475591 TMEM262E9PQX1 116 aa9.8□□□□□ -0.84
UBXN11-214ENST00000475591 COX7B2Q8TF08 81 aa9.8□□□□□ -0.84
UBXN11-214ENST00000475591 PPDPFLQ8WWR9 84 aa9.8□□□□□ -0.84
UBXN11-214ENST00000475591 IGHV3OR16-9A0A0B4J2B5 98 aa9.8□□□□□ -0.84
UBXN11-214ENST00000475591 SMIM20Q8N5G0 67 aa9.8□□□□□ -0.84
UBXN11-214ENST00000475591 PRO0255Q9UI72 69 aa9.79□□□□□ -0.84
UBXN11-214ENST00000475591 TEP1Q99973 2627 aaKnown RBP9.79□□□□□ -0.84
UBXN11-214ENST00000475591 IGHV4-28A0A0C4DH34 117 aa9.79□□□□□ -0.84
UBXN11-214ENST00000475591 LINC00959A0A1B0GUT2 108 aa9.78□□□□□ -0.84
UBXN11-214ENST00000475591 SMIM9A6NGZ8 99 aa9.78□□□□□ -0.84
UBXN11-214ENST00000475591 Q8N3U1 123 aa9.78□□□□□ -0.84
UBXN11-214ENST00000475591 CELA1Q9UNI1 258 aa9.78□□□□□ -0.84
UBXN11-214ENST00000475591 CDIP1Q9H305 208 aa9.78□□□□□ -0.84
UBXN11-214ENST00000475591 C11orf68Q9H3H3 251 aaKnown RBP9.78□□□□□ -0.84
UBXN11-214ENST00000475591 PAX4O43316 350 aa9.77□□□□□ -0.85
UBXN11-214ENST00000475591 NTN5Q8WTR8 489 aaPredicted RBP9.77□□□□□ -0.85
UBXN11-214ENST00000475591 XCL1P47992 114 aa9.77□□□□□ -0.85
UBXN11-214ENST00000475591 MIR7-3HGQ8N6C7 128 aa9.76□□□□□ -0.85
UBXN11-214ENST00000475591 COX6CP09669 75 aa9.76□□□□□ -0.85
UBXN11-214ENST00000475591 A0A087WZ39 114 aa9.75□□□□□ -0.85
UBXN11-214ENST00000475591 TRBV10-2A0A0K0K1G8 114 aa9.75□□□□□ -0.85
UBXN11-214ENST00000475591 LYRM9A8MSI8 78 aa9.75□□□□□ -0.85
UBXN11-214ENST00000475591 LST1O00453 97 aa9.75□□□□□ -0.85
UBXN11-214ENST00000475591 APOC4P55056 127 aa9.75□□□□□ -0.85
UBXN11-214ENST00000475591 TEX49A0A1B0GTD5 131 aa9.74□□□□□ -0.85
UBXN11-214ENST00000475591 DAD1P61803 113 aa9.74□□□□□ -0.85
UBXN11-214ENST00000475591 Q8NAQ8 132 aa9.74□□□□□ -0.85
UBXN11-214ENST00000475591 PFN2P35080 140 aa9.73□□□□□ -0.85
UBXN11-214ENST00000475591 LINC00158P58513 81 aa9.73□□□□□ -0.85
UBXN11-214ENST00000475591 M0QXV9 152 aa9.73□□□□□ -0.85
UBXN11-214ENST00000475591 HTN3P15516 51 aa9.73□□□□□ -0.85
UBXN11-214ENST00000475591 C2orf82Q6UX34 121 aa9.73□□□□□ -0.85
UBXN11-214ENST00000475591 A0A1B0GUV1 79 aa9.72□□□□□ -0.85
UBXN11-214ENST00000475591 IGHV4-30-4P0DP06 118 aa9.72□□□□□ -0.85
UBXN11-214ENST00000475591 LINC00269Q8N2A0 174 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 180.9 ms