RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 KIF25-AS1Q9Y6Z4 181 aa3.31□□□□□ -1.88
CCNL1-215ENST00000474539 PCNX3Q9H6A9 2034 aa3.31□□□□□ -1.88
CCNL1-215ENST00000474539 LRCOL1A6NCL2 159 aa3.31□□□□□ -1.88
CCNL1-215ENST00000474539 LECT2O14960 151 aa3.31□□□□□ -1.88
CCNL1-215ENST00000474539 Q6ZRP5 223 aa3.31□□□□□ -1.88
CCNL1-215ENST00000474539 C18orf65Q6ZTR6 163 aa3.31□□□□□ -1.88
CCNL1-215ENST00000474539 LST1O00453 97 aa3.31□□□□□ -1.88
CCNL1-215ENST00000474539 MRPS12O15235 138 aaKnown RBP3.31□□□□□ -1.88
CCNL1-215ENST00000474539 TEX49A0A1B0GTD5 131 aa3.3□□□□□ -1.88
CCNL1-215ENST00000474539 H3BMG7 143 aa3.3□□□□□ -1.88
CCNL1-215ENST00000474539 PRR15LQ9BU68 103 aa3.3□□□□□ -1.88
CCNL1-215ENST00000474539 SPTAN1Q13813 2472 aaKnown RBP3.3□□□□□ -1.88
CCNL1-215ENST00000474539 ADCYAP1P18509 176 aa3.3□□□□□ -1.88
CCNL1-215ENST00000474539 KRTAP21-3Q3LHN1 58 aa3.3□□□□□ -1.88
CCNL1-215ENST00000474539 GDF5OSQ5U4N7 250 aa3.3□□□□□ -1.88
CCNL1-215ENST00000474539 SPAG11AQ6PDA7 123 aa3.3□□□□□ -1.88
CCNL1-215ENST00000474539 CDKN2A-AS1Q9UH64 79 aa3.3□□□□□ -1.88
CCNL1-215ENST00000474539 CADP27708 2225 aa3.3□□□□□ -1.88
CCNL1-215ENST00000474539 ARFGEF3Q5TH69 2177 aa3.3□□□□□ -1.88
CCNL1-215ENST00000474539 C16orf90A8MZG2 172 aa3.3□□□□□ -1.88
CCNL1-215ENST00000474539 ZNF73O43830 326 aaPredicted RBP3.3□□□□□ -1.88
CCNL1-215ENST00000474539 IGLV2-8P01709 118 aa3.3□□□□□ -1.88
CCNL1-215ENST00000474539 LINC00308Q8TCZ7 52 aa3.3□□□□□ -1.88
CCNL1-215ENST00000474539 TET2Q6N021 2002 aaPredicted RBP3.3□□□□□ -1.88
CCNL1-215ENST00000474539 Q6ZS46 218 aa3.29□□□□□ -1.88
CCNL1-215ENST00000474539 MRPL55Q7Z7F7 128 aaKnown RBP3.29□□□□□ -1.88
CCNL1-215ENST00000474539 TRBV7-6A0A0J9YX20 115 aa3.29□□□□□ -1.88
CCNL1-215ENST00000474539 J3QL48 77 aa3.29□□□□□ -1.88
CCNL1-215ENST00000474539 ROS1P08922 2347 aa3.29□□□□□ -1.88
CCNL1-215ENST00000474539 DEFB104AQ8WTQ1 72 aa3.29□□□□□ -1.88
CCNL1-215ENST00000474539 FREM1Q5H8C1 2179 aa3.29□□□□□ -1.88
CCNL1-215ENST00000474539 CYSRT1A8MQ03 144 aa3.29□□□□□ -1.88
CCNL1-215ENST00000474539 IGLV2-11P01706 119 aa3.29□□□□□ -1.88
CCNL1-215ENST00000474539 C19orf73Q9NVV2 129 aa3.29□□□□□ -1.88
CCNL1-215ENST00000474539 PLA2G2EQ9NZK7 142 aa3.29□□□□□ -1.88
CCNL1-215ENST00000474539 DOCK11Q5JSL3 2073 aa3.28□□□□□ -1.88
CCNL1-215ENST00000474539 NAV2Q8IVL1 2488 aa3.28□□□□□ -1.88
CCNL1-215ENST00000474539 ATP5EP56381 51 aaPredicted RBP3.28□□□□□ -1.88
CCNL1-215ENST00000474539 C1orf137Q5JT78 98 aa3.28□□□□□ -1.88
CCNL1-215ENST00000474539 LINC00173Q6ZV60 143 aa3.28□□□□□ -1.88
CCNL1-215ENST00000474539 FAM19A3Q7Z5A8 133 aa3.28□□□□□ -1.88
CCNL1-215ENST00000474539 WFDC10AQ9H1F0 79 aa3.28□□□□□ -1.88
CCNL1-215ENST00000474539 RETNQ9HD89 108 aa3.28□□□□□ -1.88
CCNL1-215ENST00000474539 NACAE9PAV3 2078 aa3.28□□□□□ -1.88
CCNL1-215ENST00000474539 PCP2Q8IVA1 136 aa3.28□□□□□ -1.88
CCNL1-215ENST00000474539 NBASA2RRP1 2371 aa3.28□□□□□ -1.89
CCNL1-215ENST00000474539 IGKV4-1P06312 121 aa3.27□□□□□ -1.89
CCNL1-215ENST00000474539 Q6ZPA2 131 aa3.27□□□□□ -1.89
CCNL1-215ENST00000474539 TEN1Q86WV5 123 aa3.27□□□□□ -1.89
CCNL1-215ENST00000474539 DNAH10OSP0CZ25 163 aa3.27□□□□□ -1.89
CCNL1-215ENST00000474539 PRB4P10163 310 aaPredicted RBP3.27□□□□□ -1.89
CCNL1-215ENST00000474539 CRYGAP11844 174 aa3.27□□□□□ -1.89
CCNL1-215ENST00000474539 LINC00643Q86TS7 51 aa3.27□□□□□ -1.89
CCNL1-215ENST00000474539 NDUFC1O43677 76 aa3.27□□□□□ -1.89
CCNL1-215ENST00000474539 PTPRBP23467 1997 aa3.27□□□□□ -1.89
CCNL1-215ENST00000474539 PRB2P02812 416 aaPredicted RBP3.27□□□□□ -1.89
CCNL1-215ENST00000474539 DEFB1P60022 68 aa3.27□□□□□ -1.89
CCNL1-215ENST00000474539 V9GYY9 64 aa3.27□□□□□ -1.89
CCNL1-215ENST00000474539 TM2D3Q9BRN9 247 aa3.26□□□□□ -1.89
CCNL1-215ENST00000474539 SBSPONQ8IVN8 264 aa3.26□□□□□ -1.89
CCNL1-215ENST00000474539 AMELXQ99217 191 aa3.26□□□□□ -1.89
CCNL1-215ENST00000474539 A0A096LNT2 108 aa3.26□□□□□ -1.89
CCNL1-215ENST00000474539 A8MTW9 85 aa3.26□□□□□ -1.89
CCNL1-215ENST00000474539 RPL37AP61513 92 aaKnown RBP3.26□□□□□ -1.89
CCNL1-215ENST00000474539 C6orf99Q4VX62 202 aa3.26□□□□□ -1.89
CCNL1-215ENST00000474539 ANKRD39Q53RE8 183 aa3.26□□□□□ -1.89
CCNL1-215ENST00000474539 ABCA1O95477 2261 aa3.26□□□□□ -1.89
CCNL1-215ENST00000474539 EML5Q05BV3 1969 aa3.26□□□□□ -1.89
CCNL1-215ENST00000474539 CRIP1P50238 77 aa3.25□□□□□ -1.89
CCNL1-215ENST00000474539 RTL8CO15255 209 aa3.25□□□□□ -1.89
CCNL1-215ENST00000474539 CACNA1AO00555 2505 aa3.25□□□□□ -1.89
CCNL1-215ENST00000474539 Q8NAQ8 132 aa3.25□□□□□ -1.89
CCNL1-215ENST00000474539 FAM19A4Q96LR4 140 aa3.25□□□□□ -1.89
CCNL1-215ENST00000474539 PPDPFQ9H3Y8 114 aa3.25□□□□□ -1.89
CCNL1-215ENST00000474539 XAGE1AQ9HD64 81 aa3.25□□□□□ -1.89
CCNL1-215ENST00000474539 SERP1Q9Y6X1 66 aa3.25□□□□□ -1.89
CCNL1-215ENST00000474539 X6R8D5 127 aa3.25□□□□□ -1.89
CCNL1-215ENST00000474539 LINC00242Q5T6M2 205 aa3.24□□□□□ -1.89
CCNL1-215ENST00000474539 PRR9Q5T870 116 aa3.24□□□□□ -1.89
CCNL1-215ENST00000474539 C11orf72Q8NBR9 251 aa3.24□□□□□ -1.89
CCNL1-215ENST00000474539 RAI1Q7Z5J4 1906 aaPredicted RBP3.24□□□□□ -1.89
CCNL1-215ENST00000474539 GVQW2A0A096LPI5 108 aaPredicted RBP3.24□□□□□ -1.89
CCNL1-215ENST00000474539 FAM236DA0A1B0GTK5 79 aa3.24□□□□□ -1.89
CCNL1-215ENST00000474539 WIPF1O43516 503 aa3.24□□□□□ -1.89
CCNL1-215ENST00000474539 FAM236CP0DP71 79 aa3.24□□□□□ -1.89
CCNL1-215ENST00000474539 ASPMQ8IZT6 3477 aa3.24□□□□□ -1.89
CCNL1-215ENST00000474539 SPENQ96T58 3664 aaKnown RBP3.24□□□□□ -1.89
CCNL1-215ENST00000474539 IGIPA6NJ69 53 aa3.24□□□□□ -1.89
CCNL1-215ENST00000474539 CCKP06307 115 aa3.24□□□□□ -1.89
CCNL1-215ENST00000474539 DAND5Q8N907 189 aa3.24□□□□□ -1.89
CCNL1-215ENST00000474539 Q8NBF4 154 aa3.24□□□□□ -1.89
CCNL1-215ENST00000474539 LOC100131303A0A0U1RQF7 123 aa3.24□□□□□ -1.89
CCNL1-215ENST00000474539 NDUFV3P56181 108 aaKnown RBP3.24□□□□□ -1.89
CCNL1-215ENST00000474539 TANC2Q9HCD6 1990 aa3.24□□□□□ -1.89
CCNL1-215ENST00000474539 EXPH5Q8NEV8 1989 aa3.23□□□□□ -1.89
CCNL1-215ENST00000474539 WFDC10BQ8IUB3 73 aa3.23□□□□□ -1.89
CCNL1-215ENST00000474539 ATG2AQ2TAZ0 1938 aa3.23□□□□□ -1.89
CCNL1-215ENST00000474539 PRRC2AP48634 2157 aaKnown RBP3.23□□□□□ -1.89
CCNL1-215ENST00000474539 SMIM1B2RUZ4 78 aa3.23□□□□□ -1.89
CCNL1-215ENST00000474539 K7EIL1 84 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms