RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 H0YGX0 51 aa13.21□□□□□ -0.3
ECHDC1-214ENST00000474289 IGHV4-59P01825 116 aa13.2□□□□□ -0.3
ECHDC1-214ENST00000474289 ITPR1Q14643 2758 aa13.2□□□□□ -0.3
ECHDC1-214ENST00000474289 NCOR2Q9Y618 2525 aa13.2□□□□□ -0.3
ECHDC1-214ENST00000474289 MSMBP08118 114 aa13.2□□□□□ -0.3
ECHDC1-214ENST00000474289 C4orf26Q17RF5 130 aa13.2□□□□□ -0.3
ECHDC1-214ENST00000474289 SLPIP03973 132 aa13.19□□□□□ -0.3
ECHDC1-214ENST00000474289 CHD8Q9HCK8 2581 aa13.19□□□□□ -0.3
ECHDC1-214ENST00000474289 TRAV25A0A0B4J276 109 aa13.18□□□□□ -0.3
ECHDC1-214ENST00000474289 COX7B2Q8TF08 81 aa13.18□□□□□ -0.3
ECHDC1-214ENST00000474289 CCL19Q99731 98 aa13.18□□□□□ -0.3
ECHDC1-214ENST00000474289 CCL18P55774 89 aa13.18□□□□□ -0.3
ECHDC1-214ENST00000474289 LINC00158P58513 81 aa13.17□□□□□ -0.3
ECHDC1-214ENST00000474289 FHL2Q14192 279 aa13.17□□□□□ -0.3
ECHDC1-214ENST00000474289 SS18Q15532 418 aa13.17□□□□□ -0.3
ECHDC1-214ENST00000474289 Q5XG85 94 aa13.17□□□□□ -0.3
ECHDC1-214ENST00000474289 TOMM7Q9P0U1 55 aa13.17□□□□□ -0.3
ECHDC1-214ENST00000474289 RPL36AP83881 106 aaKnown RBP13.17□□□□□ -0.3
ECHDC1-214ENST00000474289 RPL36ALQ969Q0 106 aaKnown RBP13.17□□□□□ -0.3
ECHDC1-214ENST00000474289 GNLYP22749 145 aa13.16□□□□□ -0.3
ECHDC1-214ENST00000474289 HILS1P60008 231 aa13.16□□□□□ -0.3
ECHDC1-214ENST00000474289 INSP01308 110 aa13.15□□□□□ -0.3
ECHDC1-214ENST00000474289 DEFB112Q30KQ8 113 aa13.15□□□□□ -0.3
ECHDC1-214ENST00000474289 K7EQD1 137 aa13.14□□□□□ -0.31
ECHDC1-214ENST00000474289 TRGV1A0A0A0MS02 117 aa13.14□□□□□ -0.31
ECHDC1-214ENST00000474289 SLURP1P55000 103 aa13.13□□□□□ -0.31
ECHDC1-214ENST00000474289 HRCT1Q6UXD1 115 aa13.13□□□□□ -0.31
ECHDC1-214ENST00000474289 CCKP06307 115 aa13.13□□□□□ -0.31
ECHDC1-214ENST00000474289 DEFB136Q30KP8 78 aa13.13□□□□□ -0.31
ECHDC1-214ENST00000474289 MAP6D1Q9H9H5 199 aa13.13□□□□□ -0.31
ECHDC1-214ENST00000474289 SPTBN4Q9H254 2564 aa13.12□□□□□ -0.31
ECHDC1-214ENST00000474289 TRBV10-1A0A0K0K1A3 114 aa13.12□□□□□ -0.31
ECHDC1-214ENST00000474289 WFDC9Q8NEX5 89 aa13.12□□□□□ -0.31
ECHDC1-214ENST00000474289 GHRHP01286 108 aa13.12□□□□□ -0.31
ECHDC1-214ENST00000474289 ORMDL1Q9P0S3 153 aa13.12□□□□□ -0.31
ECHDC1-214ENST00000474289 UBE2L6O14933 153 aa13.11□□□□□ -0.31
ECHDC1-214ENST00000474289 UBE2E2Q96LR5 201 aa13.11□□□□□ -0.31
ECHDC1-214ENST00000474289 XCL2Q9UBD3 114 aa13.11□□□□□ -0.31
ECHDC1-214ENST00000474289 TRAV23DV6A0A075B6W5 121 aa13.1□□□□□ -0.31
ECHDC1-214ENST00000474289 PAX4O43316 350 aa13.1□□□□□ -0.31
ECHDC1-214ENST00000474289 PFN2P35080 140 aa13.1□□□□□ -0.31
ECHDC1-214ENST00000474289 C18orf65Q6ZTR6 163 aa13.1□□□□□ -0.31
ECHDC1-214ENST00000474289 TMEM243Q9BU79 118 aa13.1□□□□□ -0.31
ECHDC1-214ENST00000474289 ZANQ9Y493 2812 aa13.1□□□□□ -0.31
ECHDC1-214ENST00000474289 NOTCH3Q9UM47 2321 aa13.1□□□□□ -0.31
ECHDC1-214ENST00000474289 IGKV3OR2-268A0A0C4DH90 116 aa13.09□□□□□ -0.31
ECHDC1-214ENST00000474289 IL17DQ8TAD2 202 aa13.09□□□□□ -0.31
ECHDC1-214ENST00000474289 IBA57-AS1B1ANH7 110 aa13.08□□□□□ -0.32
ECHDC1-214ENST00000474289 Q6ZTI0 123 aa13.08□□□□□ -0.32
ECHDC1-214ENST00000474289 FAM19A1Q7Z5A9 133 aa13.08□□□□□ -0.32
ECHDC1-214ENST00000474289 UTP20O75691 2785 aaKnown RBP13.08□□□□□ -0.32
ECHDC1-214ENST00000474289 B4DSR2 109 aa13.08□□□□□ -0.32
ECHDC1-214ENST00000474289 S100A7L2Q5SY68 101 aa13.07□□□□□ -0.32
ECHDC1-214ENST00000474289 TRBV6-4A0A1B0GX49 114 aa13.07□□□□□ -0.32
ECHDC1-214ENST00000474289 NDUFC2O95298 119 aa13.07□□□□□ -0.32
ECHDC1-214ENST00000474289 LY6G6DO95868 133 aa13.06□□□□□ -0.32
ECHDC1-214ENST00000474289 ATP5EP2Q5VTU8 51 aa13.06□□□□□ -0.32
ECHDC1-214ENST00000474289 NDUFC2-KCTD14E9PQ53 114 aa13.05□□□□□ -0.32
ECHDC1-214ENST00000474289 ENHOQ6UWT2 76 aa13.05□□□□□ -0.32
ECHDC1-214ENST00000474289 C1orf158Q8N1D5 194 aa13.05□□□□□ -0.32
ECHDC1-214ENST00000474289 IGHV3OR16-9A0A0B4J2B5 98 aa13.04□□□□□ -0.32
ECHDC1-214ENST00000474289 C20orf197Q8N268 126 aa13.04□□□□□ -0.32
ECHDC1-214ENST00000474289 MAPK1IP1LQ8NDC0 245 aa13.04□□□□□ -0.32
ECHDC1-214ENST00000474289 MXRA5Q9NR99 2828 aa13.04□□□□□ -0.32
ECHDC1-214ENST00000474289 JMJD7-PLA2G4BH0Y9G9 81 aa13.03□□□□□ -0.32
ECHDC1-214ENST00000474289 LYPD5Q6UWN5 251 aa13.03□□□□□ -0.32
ECHDC1-214ENST00000474289 LINC00167Q96N53 147 aa13.03□□□□□ -0.32
ECHDC1-214ENST00000474289 AKAP9Q99996 3911 aa13.03□□□□□ -0.32
ECHDC1-214ENST00000474289 FLNCQ14315 2725 aa13.02□□□□□ -0.33
ECHDC1-214ENST00000474289 IGLV4-60A0A075B6I1 120 aa13.02□□□□□ -0.33
ECHDC1-214ENST00000474289 NBPF19A0A087WUL8 3843 aa13.01□□□□□ -0.33
ECHDC1-214ENST00000474289 LOC100131303A0A0U1RQF7 123 aa13.01□□□□□ -0.33
ECHDC1-214ENST00000474289 ZNF702PQ9H963 129 aa13.01□□□□□ -0.33
ECHDC1-214ENST00000474289 A0A087WZ39 114 aa13□□□□□ -0.33
ECHDC1-214ENST00000474289 DYNLRB2Q8TF09 96 aa13□□□□□ -0.33
ECHDC1-214ENST00000474289 XCL1P47992 114 aa13□□□□□ -0.33
ECHDC1-214ENST00000474289 C11orf68Q9H3H3 251 aaKnown RBP13□□□□□ -0.33
ECHDC1-214ENST00000474289 CFAP46Q8IYW2 2715 aa12.99□□□□□ -0.33
ECHDC1-214ENST00000474289 FAM236DA0A1B0GTK5 79 aa12.99□□□□□ -0.33
ECHDC1-214ENST00000474289 FAM236CP0DP71 79 aa12.99□□□□□ -0.33
ECHDC1-214ENST00000474289 Q8N814 137 aa12.99□□□□□ -0.33
ECHDC1-214ENST00000474289 USP9YO00507 2555 aaPredicted RBP12.99□□□□□ -0.33
ECHDC1-214ENST00000474289 MYO9AB2RTY4 2548 aa12.99□□□□□ -0.33
ECHDC1-214ENST00000474289 A0A096LNT2 108 aa12.98□□□□□ -0.33
ECHDC1-214ENST00000474289 TMEM256-PLSCR3K7ERE1 68 aa12.98□□□□□ -0.33
ECHDC1-214ENST00000474289 NANOS2P60321 138 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-214ENST00000474289 ODF3L2Q3SX64 289 aa12.98□□□□□ -0.33
ECHDC1-214ENST00000474289 NOP10Q9NPE3 64 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-214ENST00000474289 TRBV10-3A0A0K0K1G6 114 aa12.97□□□□□ -0.33
ECHDC1-214ENST00000474289 DEFB114Q30KQ6 69 aa12.97□□□□□ -0.33
ECHDC1-214ENST00000474289 UBL5Q9BZL1 73 aa12.97□□□□□ -0.33
ECHDC1-214ENST00000474289 STHQ8IWL8 128 aa12.96□□□□□ -0.33
ECHDC1-214ENST00000474289 LINC01356Q8N9X3 169 aa12.96□□□□□ -0.34
ECHDC1-214ENST00000474289 H7BZZ5 65 aa12.95□□□□□ -0.34
ECHDC1-214ENST00000474289 C6orf226Q5I0X4 101 aa12.95□□□□□ -0.34
ECHDC1-214ENST00000474289 EPM2AB3EWF7 344 aa12.94□□□□□ -0.34
ECHDC1-214ENST00000474289 PRR3P79522 188 aaKnown RBP12.94□□□□□ -0.34
ECHDC1-214ENST00000474289 USP9XQ93008 2570 aaPredicted RBP12.94□□□□□ -0.34
ECHDC1-214ENST00000474289 CHD6Q8TD26 2715 aa12.94□□□□□ -0.34
ECHDC1-214ENST00000474289 WNK1Q9H4A3 2382 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms