RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 IFITM10A6NMD0 228 aa7.4□□□□□ -1.22
SMPD4-217ENST00000473720 C9orf116Q5BN46 136 aaPredicted RBP7.4□□□□□ -1.22
SMPD4-217ENST00000473720 C2orf48Q96LS8 159 aa7.4□□□□□ -1.22
SMPD4-217ENST00000473720 MT-ND6P03923 174 aa7.39□□□□□ -1.23
SMPD4-217ENST00000473720 S100A8P05109 93 aa7.39□□□□□ -1.23
SMPD4-217ENST00000473720 PHF5AQ7RTV0 110 aaKnown RBP7.39□□□□□ -1.23
SMPD4-217ENST00000473720 HMCN2Q8NDA2 5059 aa7.39□□□□□ -1.23
SMPD4-217ENST00000473720 RAB5AP20339 215 aa7.38□□□□□ -1.23
SMPD4-217ENST00000473720 RPL32P62910 135 aaKnown RBP7.38□□□□□ -1.23
SMPD4-217ENST00000473720 OR10D4PQ8NGN7 298 aa7.38□□□□□ -1.23
SMPD4-217ENST00000473720 SPANXA1Q9NS26 97 aa7.38□□□□□ -1.23
SMPD4-217ENST00000473720 LOC389332A0A1B0GUA5 103 aa7.37□□□□□ -1.23
SMPD4-217ENST00000473720 A0A1B0GXF2 115 aa7.37□□□□□ -1.23
SMPD4-217ENST00000473720 NDUFA1O15239 70 aa7.37□□□□□ -1.23
SMPD4-217ENST00000473720 SRSF9Q13242 221 aaKnown RBP eCLIP7.37□□□□□ -1.23
SMPD4-217ENST00000473720 C1orf137Q5JT78 98 aa7.37□□□□□ -1.23
SMPD4-217ENST00000473720 FAM104AQ969W3 186 aa7.37□□□□□ -1.23
SMPD4-217ENST00000473720 PRELID3AQ96N28 172 aa7.37□□□□□ -1.23
SMPD4-217ENST00000473720 PSORS1C2Q9UIG4 136 aa7.37□□□□□ -1.23
SMPD4-217ENST00000473720 UBR4Q5T4S7 5183 aa7.37□□□□□ -1.23
SMPD4-217ENST00000473720 TGIF2-C20orf24A0A0A6YYL0 155 aa7.36□□□□□ -1.23
SMPD4-217ENST00000473720 IGHV3OR16-9A0A0B4J2B5 98 aa7.36□□□□□ -1.23
SMPD4-217ENST00000473720 IFI27P40305 119 aaPredicted RBP7.36□□□□□ -1.23
SMPD4-217ENST00000473720 GAGE2EQ4V326 116 aa7.36□□□□□ -1.23
SMPD4-217ENST00000473720 C10orf25Q5T742 122 aa7.36□□□□□ -1.23
SMPD4-217ENST00000473720 UNQ6190/PRO20217Q6UXQ8 127 aa7.36□□□□□ -1.23
SMPD4-217ENST00000473720 TMEM136Q6ZRR5 245 aa7.36□□□□□ -1.23
SMPD4-217ENST00000473720 ORMDL3Q8N138 153 aa7.36□□□□□ -1.23
SMPD4-217ENST00000473720 SMDT1Q9H4I9 107 aa7.36□□□□□ -1.23
SMPD4-217ENST00000473720 GAGE2DQ9UEU5 116 aa7.36□□□□□ -1.23
SMPD4-217ENST00000473720 FAM168BA1KXE4 195 aa7.35□□□□□ -1.23
SMPD4-217ENST00000473720 PPBPP02775 128 aa7.35□□□□□ -1.23
SMPD4-217ENST00000473720 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
SMPD4-217ENST00000473720 MRPS36P82909 103 aaKnown RBP7.35□□□□□ -1.23
SMPD4-217ENST00000473720 RNF151Q2KHN1 245 aa7.35□□□□□ -1.23
SMPD4-217ENST00000473720 FAM19A5Q7Z5A7 132 aaPredicted RBP7.35□□□□□ -1.23
SMPD4-217ENST00000473720 IMMP2LQ96T52 175 aa7.35□□□□□ -1.23
SMPD4-217ENST00000473720 TNXBP22105 4242 aa7.35□□□□□ -1.23
SMPD4-217ENST00000473720 MRPL35Q9NZE8 188 aaKnown RBP7.34□□□□□ -1.23
SMPD4-217ENST00000473720 IGLV4-3A0A075B6K6 122 aa7.33□□□□□ -1.24
SMPD4-217ENST00000473720 A0A087WZ39 114 aa7.33□□□□□ -1.24
SMPD4-217ENST00000473720 ZC2HC1BQ5TFG8 222 aa7.33□□□□□ -1.24
SMPD4-217ENST00000473720 TMEM141Q96I45 108 aa7.33□□□□□ -1.24
SMPD4-217ENST00000473720 MAP1LC3AQ9H492 121 aa7.33□□□□□ -1.24
SMPD4-217ENST00000473720 C6orf48Q9UBA6 75 aa7.33□□□□□ -1.24
SMPD4-217ENST00000473720 LINC00242Q5T6M2 205 aa7.32□□□□□ -1.24
SMPD4-217ENST00000473720 C2orf82Q6UX34 121 aa7.32□□□□□ -1.24
SMPD4-217ENST00000473720 TEX43Q6ZNM6 134 aa7.32□□□□□ -1.24
SMPD4-217ENST00000473720 ATP5L2Q7Z4Y8 100 aa7.32□□□□□ -1.24
SMPD4-217ENST00000473720 F8WDY8 70 aa7.31□□□□□ -1.24
SMPD4-217ENST00000473720 TOMM7Q9P0U1 55 aa7.31□□□□□ -1.24
SMPD4-217ENST00000473720 IGLV7-43P04211 117 aa7.3□□□□□ -1.24
SMPD4-217ENST00000473720 UBE2BP63146 152 aa7.3□□□□□ -1.24
SMPD4-217ENST00000473720 Q6ZN92 141 aa7.3□□□□□ -1.24
SMPD4-217ENST00000473720 KRTAP11-1Q8IUC1 163 aa7.3□□□□□ -1.24
SMPD4-217ENST00000473720 PACRGQ96M98 296 aaPredicted RBP7.3□□□□□ -1.24
SMPD4-217ENST00000473720 C2orf88Q9BSF0 95 aa7.3□□□□□ -1.24
SMPD4-217ENST00000473720 PYGO1Q9Y3Y4 419 aa7.3□□□□□ -1.24
SMPD4-217ENST00000473720 M0QXV9 152 aa7.29□□□□□ -1.24
SMPD4-217ENST00000473720 MT-ND4LP03901 98 aa7.29□□□□□ -1.24
SMPD4-217ENST00000473720 TLX1NBP0CAT3 122 aa7.29□□□□□ -1.24
SMPD4-217ENST00000473720 KIAA0087Q14695 138 aa7.29□□□□□ -1.24
SMPD4-217ENST00000473720 C2orf66Q6UXQ4 117 aa7.29□□□□□ -1.24
SMPD4-217ENST00000473720 ANAPC16Q96DE5 110 aa7.29□□□□□ -1.24
SMPD4-217ENST00000473720 CYSLTR1Q9Y271 337 aa7.29□□□□□ -1.24
SMPD4-217ENST00000473720 PRSS2P07478 247 aa7.28□□□□□ -1.24
SMPD4-217ENST00000473720 UBE2D1P51668 147 aa7.28□□□□□ -1.24
SMPD4-217ENST00000473720 Q8N8P6 123 aa7.28□□□□□ -1.24
SMPD4-217ENST00000473720 PRR26Q8N8Z3 221 aa7.28□□□□□ -1.24
SMPD4-217ENST00000473720 DIRC1Q969H9 104 aa7.28□□□□□ -1.24
SMPD4-217ENST00000473720 VCX2Q9H322 139 aa7.28□□□□□ -1.24
SMPD4-217ENST00000473720 LAMTOR2Q9Y2Q5 125 aa7.28□□□□□ -1.24
SMPD4-217ENST00000473720 TRBV30A0A0K0K1B3 111 aa7.27□□□□□ -1.25
SMPD4-217ENST00000473720 PRSS47A8MTI9 375 aa7.27□□□□□ -1.25
SMPD4-217ENST00000473720 RAB14P61106 215 aa7.27□□□□□ -1.25
SMPD4-217ENST00000473720 PNRC1Q12796 327 aaPredicted RBP7.27□□□□□ -1.25
SMPD4-217ENST00000473720 LINC00173Q6ZV60 143 aa7.27□□□□□ -1.25
SMPD4-217ENST00000473720 LINC00469Q8N7U9 141 aa7.27□□□□□ -1.25
SMPD4-217ENST00000473720 CTDSP1Q9GZU7 261 aa7.27□□□□□ -1.25
SMPD4-217ENST00000473720 NDUFC2-KCTD14E9PQ53 114 aa7.26□□□□□ -1.25
SMPD4-217ENST00000473720 CKS1BP61024 79 aa7.26□□□□□ -1.25
SMPD4-217ENST00000473720 KIAA1644Q3SXP7 199 aa7.26□□□□□ -1.25
SMPD4-217ENST00000473720 ORMDL2Q53FV1 153 aa7.26□□□□□ -1.25
SMPD4-217ENST00000473720 C9orf129Q5T035 196 aaKnown RBP7.26□□□□□ -1.25
SMPD4-217ENST00000473720 KRTAP7-1Q8IUC3 87 aa7.26□□□□□ -1.25
SMPD4-217ENST00000473720 H0Y9J4 135 aa7.25□□□□□ -1.25
SMPD4-217ENST00000473720 C6orf226Q5I0X4 101 aa7.25□□□□□ -1.25
SMPD4-217ENST00000473720 AMELXQ99217 191 aa7.25□□□□□ -1.25
SMPD4-217ENST00000473720 ALKBH7Q9BT30 221 aaPredicted RBP7.24□□□□□ -1.25
SMPD4-217ENST00000473720 NXT2Q9NPJ8 142 aaKnown RBP7.24□□□□□ -1.25
SMPD4-217ENST00000473720 LINC01561Q8N1V8 128 aa7.23□□□□□ -1.25
SMPD4-217ENST00000473720 GEMIN7Q9H840 131 aaKnown RBP7.23□□□□□ -1.25
SMPD4-217ENST00000473720 XAGE1AQ9HD64 81 aa7.23□□□□□ -1.25
SMPD4-217ENST00000473720 LRP2P98164 4655 aa7.22□□□□□ -1.25
SMPD4-217ENST00000473720 IGIPA6NJ69 53 aa7.22□□□□□ -1.25
SMPD4-217ENST00000473720 Q8IZM0 81 aa7.22□□□□□ -1.25
SMPD4-217ENST00000473720 CDKN2A-AS1Q9UH64 79 aa7.22□□□□□ -1.25
SMPD4-217ENST00000473720 HERVK_113P63121 156 aa7.21□□□□□ -1.26
SMPD4-217ENST00000473720 PAPPA-AS1Q5QFB9 102 aa7.21□□□□□ -1.26
SMPD4-217ENST00000473720 K7EMI3 77 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms