RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 HSBP1L1C9JCN9 74 aa7.34□□□□□ -1.23
SP140-208ENST00000473711 PLNP26678 52 aa7.34□□□□□ -1.23
SP140-208ENST00000473711 UBE2D1P51668 147 aa7.34□□□□□ -1.23
SP140-208ENST00000473711 TCTAP57738 103 aa7.34□□□□□ -1.23
SP140-208ENST00000473711 WFDC10BQ8IUB3 73 aa7.34□□□□□ -1.23
SP140-208ENST00000473711 IGHV3-30P01768 117 aa7.33□□□□□ -1.24
SP140-208ENST00000473711 IGHV3-33P01772 117 aa7.33□□□□□ -1.24
SP140-208ENST00000473711 IGHV3-30-3P0DP02 117 aa7.33□□□□□ -1.24
SP140-208ENST00000473711 IGHV3-30-5P0DP03 117 aa7.33□□□□□ -1.24
SP140-208ENST00000473711 NFE4Q86UQ8 179 aa7.33□□□□□ -1.24
SP140-208ENST00000473711 APLNQ9ULZ1 77 aa7.33□□□□□ -1.24
SP140-208ENST00000473711 LINC00588Q9Y4M8 146 aa7.33□□□□□ -1.24
SP140-208ENST00000473711 ANGP03950 147 aaKnown RBP7.32□□□□□ -1.24
SP140-208ENST00000473711 CCL18P55774 89 aa7.32□□□□□ -1.24
SP140-208ENST00000473711 COX6A2Q02221 97 aa7.32□□□□□ -1.24
SP140-208ENST00000473711 ANKRD39Q53RE8 183 aa7.32□□□□□ -1.24
SP140-208ENST00000473711 TMEM170BQ5T4T1 132 aa7.32□□□□□ -1.24
SP140-208ENST00000473711 CLPSL2Q6UWE3 100 aa7.32□□□□□ -1.24
SP140-208ENST00000473711 CHAC1Q9BUX1 264 aa7.32□□□□□ -1.24
SP140-208ENST00000473711 KLK5Q9Y337 293 aaPredicted RBP7.32□□□□□ -1.24
SP140-208ENST00000473711 TINCRA0A1B0GVN0 87 aa7.31□□□□□ -1.24
SP140-208ENST00000473711 NUPR2A6NF83 97 aa7.31□□□□□ -1.24
SP140-208ENST00000473711 LINC00242Q5T6M2 205 aa7.31□□□□□ -1.24
SP140-208ENST00000473711 ZFAND6Q6FIF0 208 aa7.31□□□□□ -1.24
SP140-208ENST00000473711 LINC00269Q8N2A0 174 aa7.31□□□□□ -1.24
SP140-208ENST00000473711 GEMIN7Q9H840 131 aaKnown RBP7.31□□□□□ -1.24
SP140-208ENST00000473711 KLK12Q9UKR0 248 aa7.31□□□□□ -1.24
SP140-208ENST00000473711 COX11Q9Y6N1 276 aa7.31□□□□□ -1.24
SP140-208ENST00000473711 EPPK1P58107 5090 aaKnown RBP7.31□□□□□ -1.24
SP140-208ENST00000473711 BIRC6Q9NR09 4857 aa7.3□□□□□ -1.24
SP140-208ENST00000473711 LINC00959A0A1B0GUT2 108 aa7.3□□□□□ -1.24
SP140-208ENST00000473711 ZNF22P17026 224 aaPredicted RBP7.3□□□□□ -1.24
SP140-208ENST00000473711 HINT1P49773 126 aaPredicted RBP7.3□□□□□ -1.24
SP140-208ENST00000473711 PTTG1IPP53801 180 aa7.3□□□□□ -1.24
SP140-208ENST00000473711 REG3AQ06141 175 aa7.3□□□□□ -1.24
SP140-208ENST00000473711 FAM19A3Q7Z5A8 133 aa7.3□□□□□ -1.24
SP140-208ENST00000473711 SEC11AP67812 179 aa7.29□□□□□ -1.24
SP140-208ENST00000473711 UBE2V1Q13404 147 aa7.29□□□□□ -1.24
SP140-208ENST00000473711 SS18Q15532 418 aa7.29□□□□□ -1.24
SP140-208ENST00000473711 IGHV3-64A0A075B6Q5 118 aa7.28□□□□□ -1.24
SP140-208ENST00000473711 IGKV2D-26A0A0A0MRZ7 120 aa7.28□□□□□ -1.24
SP140-208ENST00000473711 TMEM223A0PJW6 202 aa7.28□□□□□ -1.24
SP140-208ENST00000473711 NMUP48645 174 aa7.28□□□□□ -1.24
SP140-208ENST00000473711 HERVK_113P61574 105 aa7.28□□□□□ -1.24
SP140-208ENST00000473711 HERVK_113P63121 156 aa7.28□□□□□ -1.24
SP140-208ENST00000473711 SLC25A34Q6PIV7 304 aa7.28□□□□□ -1.24
SP140-208ENST00000473711 CDKN2A-AS1Q9UH64 79 aa7.28□□□□□ -1.24
SP140-208ENST00000473711 IGLV10-54A0A075B6I4 117 aa7.27□□□□□ -1.25
SP140-208ENST00000473711 SIVA1O15304 175 aa7.27□□□□□ -1.25
SP140-208ENST00000473711 CCL25O15444 150 aa7.27□□□□□ -1.25
SP140-208ENST00000473711 SPINK8P0C7L1 97 aa7.27□□□□□ -1.25
SP140-208ENST00000473711 DNAH10OSP0CZ25 163 aa7.27□□□□□ -1.25
SP140-208ENST00000473711 LINC01556Q5JQF7 62 aa7.27□□□□□ -1.25
SP140-208ENST00000473711 ENHOQ6UWT2 76 aa7.27□□□□□ -1.25
SP140-208ENST00000473711 UBE2DNLQ8IWF7 75 aa7.27□□□□□ -1.25
SP140-208ENST00000473711 UBE2WQ96B02 151 aa7.27□□□□□ -1.25
SP140-208ENST00000473711 IGLV5-45A0A087WSX0 123 aa7.26□□□□□ -1.25
SP140-208ENST00000473711 E9PLD3 99 aa7.26□□□□□ -1.25
SP140-208ENST00000473711 H3BRM9 83 aa7.26□□□□□ -1.25
SP140-208ENST00000473711 K7EP13 123 aa7.26□□□□□ -1.25
SP140-208ENST00000473711 XCL1P47992 114 aa7.26□□□□□ -1.25
SP140-208ENST00000473711 C5orf38Q86SI9 138 aa7.26□□□□□ -1.25
SP140-208ENST00000473711 PCP2Q8IVA1 136 aa7.26□□□□□ -1.25
SP140-208ENST00000473711 MUC7Q8TAX7 377 aa7.26□□□□□ -1.25
SP140-208ENST00000473711 UPK3BQ9BT76 320 aa7.26□□□□□ -1.25
SP140-208ENST00000473711 PRR34Q9NV39 138 aa7.26□□□□□ -1.25
SP140-208ENST00000473711 COL7A1Q02388 2944 aa7.25□□□□□ -1.25
SP140-208ENST00000473711 TRAV8-3A0A0A6YYJ7 113 aa7.25□□□□□ -1.25
SP140-208ENST00000473711 CRPP02741 224 aa7.25□□□□□ -1.25
SP140-208ENST00000473711 COX8AP10176 69 aa7.25□□□□□ -1.25
SP140-208ENST00000473711 CHCHD10Q8WYQ3 142 aaPredicted RBP7.25□□□□□ -1.25
SP140-208ENST00000473711 TTTY13Q9BZ97 58 aa7.25□□□□□ -1.25
SP140-208ENST00000473711 Q9H8V8 135 aa7.25□□□□□ -1.25
SP140-208ENST00000473711 IGHV3OR16-9A0A0B4J2B5 98 aa7.24□□□□□ -1.25
SP140-208ENST00000473711 H3BS24 57 aa7.24□□□□□ -1.25
SP140-208ENST00000473711 LEPROTO15243 131 aa7.24□□□□□ -1.25
SP140-208ENST00000473711 MAPKAPK5-AS1Q8N8E1 139 aa7.24□□□□□ -1.25
SP140-208ENST00000473711 WWC2-AS2Q96NR7 200 aa7.24□□□□□ -1.25
SP140-208ENST00000473711 TP73-AS1Q9UF72 201 aa7.24□□□□□ -1.25
SP140-208ENST00000473711 IGHV1-58A0A0C4DH39 117 aa7.23□□□□□ -1.25
SP140-208ENST00000473711 GAGE12HA6NDE8 117 aa7.23□□□□□ -1.25
SP140-208ENST00000473711 TSPEAR-AS2P59090 65 aa7.23□□□□□ -1.25
SP140-208ENST00000473711 VAMP3Q15836 100 aa7.23□□□□□ -1.25
SP140-208ENST00000473711 BVES-AS1Q5T3Y7 98 aa7.23□□□□□ -1.25
SP140-208ENST00000473711 CD164L2Q6UWJ8 174 aa7.23□□□□□ -1.25
SP140-208ENST00000473711 PLEKHB2Q96CS7 222 aa7.23□□□□□ -1.25
SP140-208ENST00000473711 A0A087WZ39 114 aa7.22□□□□□ -1.25
SP140-208ENST00000473711 TRAV8-4A0A0B4J246 113 aa7.22□□□□□ -1.25
SP140-208ENST00000473711 SMIM1B2RUZ4 78 aa7.22□□□□□ -1.25
SP140-208ENST00000473711 J3QQQ9 107 aa7.22□□□□□ -1.25
SP140-208ENST00000473711 LGALS3P17931 250 aaKnown RBP7.22□□□□□ -1.25
SP140-208ENST00000473711 MIAQ16674 131 aa7.22□□□□□ -1.25
SP140-208ENST00000473711 LCE1DQ5T752 114 aa7.22□□□□□ -1.25
SP140-208ENST00000473711 BOD1L2Q8IYS8 172 aa7.22□□□□□ -1.25
SP140-208ENST00000473711 DYNC2H1Q8NCM8 4307 aaKnown RBP7.22□□□□□ -1.25
SP140-208ENST00000473711 IBA57-AS1B1ANH7 110 aa7.21□□□□□ -1.26
SP140-208ENST00000473711 TAX1BP3O14907 124 aa7.21□□□□□ -1.26
SP140-208ENST00000473711 FOXI1Q12951 378 aa7.21□□□□□ -1.26
SP140-208ENST00000473711 Q9HAA7 133 aa7.21□□□□□ -1.26
SP140-208ENST00000473711 IGKV2D-24A0A075B6R9 120 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 291.1 ms