RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 MUC4Q99102 2169 aa1.79□□□□□ -2.12
CD46-213ENST00000471987 ZNF407Q9C0G0 2248 aa1.79□□□□□ -2.12
CD46-213ENST00000471987 ITPR3Q14573 2671 aa1.79□□□□□ -2.12
CD46-213ENST00000471987 SMG1Q96Q15 3661 aaKnown RBP1.79□□□□□ -2.12
CD46-213ENST00000471987 PCLOQ9Y6V0 5065 aa1.79□□□□□ -2.12
CD46-213ENST00000471987 ZFHX2Q9C0A1 2572 aaPredicted RBP1.78□□□□□ -2.12
CD46-213ENST00000471987 SPTBN4Q9H254 2564 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 FCGBPQ9Y6R7 5405 aaPredicted RBP1.78□□□□□ -2.12
CD46-213ENST00000471987 TULP4Q9NRJ4 1543 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 IGLV10-54A0A075B6I4 117 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 IGKV1D-37A0A075B6S9 117 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 IGKV1OR2-108A0A075B7D4 117 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 IGLV3-32A0A0A0MS00 114 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 TRAV22A0A0B4J277 110 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 CEBPZOSA8MTT3 80 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 C17orf98A8MV24 154 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 E7EUB6 86 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 F8WEM9 126 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 IFI27P40305 119 aaPredicted RBP1.78□□□□□ -2.12
CD46-213ENST00000471987 EDDM3BP56851 147 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 NNATQ16517 81 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 FAM229BQ4G0N7 80 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 SPANXN5Q5MJ07 72 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 Q5VV11 94 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 ZNF818PQ6ZRF7 136 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 TMEM105Q8N8V8 129 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 PPP1R1CQ8WVI7 109 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 RNF5Q99942 180 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 NMES1Q9C002 83 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 BPESC1Q9GZL8 116 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 GNG13Q9P2W3 67 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 CDH23Q9H251 3354 aa1.78□□□□□ -2.12
CD46-213ENST00000471987 KALRNO60229 2985 aa1.77□□□□□ -2.13
CD46-213ENST00000471987 MUC6Q6W4X9 2439 aa1.77□□□□□ -2.13
CD46-213ENST00000471987 TRAV23DV6A0A075B6W5 121 aa1.77□□□□□ -2.13
CD46-213ENST00000471987 TMEM30CPA0ZSE6 113 aa1.77□□□□□ -2.13
CD46-213ENST00000471987 SDHAF1A6NFY7 115 aa1.77□□□□□ -2.13
CD46-213ENST00000471987 TMEM14DPA8MWL7 114 aa1.77□□□□□ -2.13
CD46-213ENST00000471987 LHBP01229 141 aa1.77□□□□□ -2.13
CD46-213ENST00000471987 BAALC-AS2P0C853 105 aa1.77□□□□□ -2.13
CD46-213ENST00000471987 MGST1P10620 155 aaKnown RBP1.77□□□□□ -2.13
CD46-213ENST00000471987 ZNF22P17026 224 aaPredicted RBP1.77□□□□□ -2.13
CD46-213ENST00000471987 CLECL1Q8IZS7 167 aa1.77□□□□□ -2.13
CD46-213ENST00000471987 C22orf24Q9Y442 160 aa1.77□□□□□ -2.13
CD46-213ENST00000471987 MYOFQ9NZM1 2061 aa1.77□□□□□ -2.13
CD46-213ENST00000471987 BCORQ6W2J9 1755 aa1.77□□□□□ -2.13
CD46-213ENST00000471987 DOPEY1Q5JWR5 2465 aa1.77□□□□□ -2.13
CD46-213ENST00000471987 DDX60LQ5H9U9 1706 aaKnown RBP1.77□□□□□ -2.13
CD46-213ENST00000471987 SCN7AQ01118 1682 aa1.77□□□□□ -2.13
CD46-213ENST00000471987 FAM223BA6NKX1 122 aa1.76□□□□□ -2.13
CD46-213ENST00000471987 ZNF815PA8K554 130 aa1.76□□□□□ -2.13
CD46-213ENST00000471987 H3BQ85 93 aa1.76□□□□□ -2.13
CD46-213ENST00000471987 DEFA4P12838 97 aa1.76□□□□□ -2.13
CD46-213ENST00000471987 SSBP1Q04837 148 aaKnown RBP1.76□□□□□ -2.13
CD46-213ENST00000471987 ATXN8Q156A1 80 aa1.76□□□□□ -2.13
CD46-213ENST00000471987 ZCCHC23Q6ZST2 131 aa1.76□□□□□ -2.13
CD46-213ENST00000471987 SPANXA2-OT1Q8N9U9 137 aa1.76□□□□□ -2.13
CD46-213ENST00000471987 TMEM254Q8TBM7 123 aa1.76□□□□□ -2.13
CD46-213ENST00000471987 C20orf166-AS1Q96NR2 134 aa1.76□□□□□ -2.13
CD46-213ENST00000471987 CMC2Q9NRP2 79 aa1.76□□□□□ -2.13
CD46-213ENST00000471987 CDC42SE2Q9NRR3 84 aa1.76□□□□□ -2.13
CD46-213ENST00000471987 UBE2D4Q9Y2X8 147 aa1.76□□□□□ -2.13
CD46-213ENST00000471987 SAMD9LQ8IVG5 1584 aa1.76□□□□□ -2.13
CD46-213ENST00000471987 DMDP11532 3685 aa1.76□□□□□ -2.13
CD46-213ENST00000471987 ZDBF2Q9HCK1 2354 aa1.76□□□□□ -2.13
CD46-213ENST00000471987 SIP14410 1827 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 IGKV1D-42A0A075B6H8 117 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 IGHV1-18A0A0C4DH31 117 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 CXorf51AA0A1B0GTR3 108 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 LOC101927531A0A1B0GV80 90 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 CHKB-CPT1BH3BT56 60 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 H3BVH4 76 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 HCRTO43612 131 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 LEPROTL1O95214 131 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 IGHV3-53P01767 116 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 PRH1P02810 166 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 UBE2D1P51668 147 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 MIR22HGQ0VDD5 57 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 C10orf128Q5T292 105 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 NCBP2-AS2Q69YL0 99 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.75□□□□□ -2.13
CD46-213ENST00000471987 Q6ZS52 159 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 TMEM14BQ9NUH8 114 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 ZFHX3Q15911 3703 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 MPDZO75970 2070 aa1.75□□□□□ -2.13
CD46-213ENST00000471987 HECTD1Q9ULT8 2610 aa1.74□□□□□ -2.13
CD46-213ENST00000471987 MALRD1Q5VYJ5 2156 aa1.74□□□□□ -2.13
CD46-213ENST00000471987 TMSB15BA0A087X1C1 80 aa1.74□□□□□ -2.13
CD46-213ENST00000471987 TRAV10A0A0B4J240 114 aa1.74□□□□□ -2.13
CD46-213ENST00000471987 TRAV12-3A0A0B4J271 114 aa1.74□□□□□ -2.13
CD46-213ENST00000471987 TEX49A0A1B0GTD5 131 aa1.74□□□□□ -2.13
CD46-213ENST00000471987 C11orf86A6NJI1 115 aa1.74□□□□□ -2.13
CD46-213ENST00000471987 SAA2P0DJI9 122 aaPredicted RBP1.74□□□□□ -2.13
CD46-213ENST00000471987 PRB4P10163 310 aaPredicted RBP1.74□□□□□ -2.13
CD46-213ENST00000471987 KRTAP13-4Q3LI77 160 aa1.74□□□□□ -2.13
CD46-213ENST00000471987 C2orf82Q6UX34 121 aa1.74□□□□□ -2.13
CD46-213ENST00000471987 KLF14Q8TD94 323 aaPredicted RBP1.74□□□□□ -2.13
CD46-213ENST00000471987 PROK2Q9HC23 129 aa1.74□□□□□ -2.13
CD46-213ENST00000471987 PSENENQ9NZ42 101 aa1.74□□□□□ -2.13
CD46-213ENST00000471987 ABRACLQ9P1F3 81 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms