RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 IGHV1-58A0A0C4DH39 117 aa1.42□□□□□ -2.18
VPS13A-210ENST00000471439 ATP6V1G2O95670 118 aa1.42□□□□□ -2.18
VPS13A-210ENST00000471439 TYMSP04818 313 aa1.42□□□□□ -2.18
VPS13A-210ENST00000471439 CTXN2P0C2S0 81 aa1.42□□□□□ -2.18
VPS13A-210ENST00000471439 CXCL2P19875 107 aa1.42□□□□□ -2.18
VPS13A-210ENST00000471439 SMAGPQ0VAQ4 97 aa1.42□□□□□ -2.18
VPS13A-210ENST00000471439 OR2D3Q8NGH3 330 aa1.42□□□□□ -2.18
VPS13A-210ENST00000471439 MGLLQ99685 303 aa1.42□□□□□ -2.18
VPS13A-210ENST00000471439 TMEM147Q9BVK8 224 aa1.42□□□□□ -2.18
VPS13A-210ENST00000471439 MED28Q9H204 178 aa1.42□□□□□ -2.18
VPS13A-210ENST00000471439 ENY2Q9NPA8 101 aa1.42□□□□□ -2.18
VPS13A-210ENST00000471439 TRBV7-3A0A075B6L6 115 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 G3V2T6 193 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 M0R3E3 92 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 FABP1P07148 127 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 COX4I1P13073 169 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 AKR1C2P52895 323 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 KRTAP13-4Q3LI77 160 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 XAF1Q6GPH4 301 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 LPCAT3Q6P1A2 487 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 ATP11AUNQ6ZP68 121 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 ATP5L2Q7Z4Y8 100 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 RNASE11Q8TAA1 199 aaKnown RBP1.41□□□□□ -2.18
VPS13A-210ENST00000471439 STOML3Q8TAV4 291 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 PLEKHB2Q96CS7 222 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 SMIM12Q96EX1 92 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 IMMP2LQ96T52 175 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 PAIP2Q9BPZ3 127 aaKnown RBP1.41□□□□□ -2.18
VPS13A-210ENST00000471439 COMMD3Q9UBI1 195 aa1.41□□□□□ -2.18
VPS13A-210ENST00000471439 IGKV2-40A0A087WW87 121 aaPredicted RBP1.4□□□□□ -2.19
VPS13A-210ENST00000471439 MUC21A0A140T8X8 626 aa1.4□□□□□ -2.19
VPS13A-210ENST00000471439 LINC00862A6NCI5 91 aa1.4□□□□□ -2.19
VPS13A-210ENST00000471439 PGLYRP1O75594 196 aaPredicted RBP1.4□□□□□ -2.19
VPS13A-210ENST00000471439 IGKV2D-40P01614 121 aaPredicted RBP1.4□□□□□ -2.19
VPS13A-210ENST00000471439 FXYD4P59646 89 aa1.4□□□□□ -2.19
VPS13A-210ENST00000471439 ARPC4P59998 168 aa1.4□□□□□ -2.19
VPS13A-210ENST00000471439 HERVK_113P63121 156 aa1.4□□□□□ -2.19
VPS13A-210ENST00000471439 Q6AWC8 147 aa1.4□□□□□ -2.19
VPS13A-210ENST00000471439 LYZL1Q6UWQ5 148 aa1.4□□□□□ -2.19
VPS13A-210ENST00000471439 OR5A1Q8NGJ0 315 aa1.4□□□□□ -2.19
VPS13A-210ENST00000471439 OBSCN-AS1Q96MR7 158 aa1.4□□□□□ -2.19
VPS13A-210ENST00000471439 TRGV9Q99603 122 aa1.4□□□□□ -2.19
VPS13A-210ENST00000471439 GID8Q9NWU2 228 aa1.4□□□□□ -2.19
VPS13A-210ENST00000471439 A0A0G2JQZ4 141 aa1.39□□□□□ -2.19
VPS13A-210ENST00000471439 GABARAPH6UMI1 98 aa1.39□□□□□ -2.19
VPS13A-210ENST00000471439 CFDP00746 253 aaPredicted RBP1.39□□□□□ -2.19
VPS13A-210ENST00000471439 PPYP01298 95 aa1.39□□□□□ -2.19
VPS13A-210ENST00000471439 UBE2G2P60604 165 aa1.39□□□□□ -2.19
VPS13A-210ENST00000471439 DNAL1Q4LDG9 190 aa1.39□□□□□ -2.19
VPS13A-210ENST00000471439 HSP90B2PQ58FF3 399 aa1.39□□□□□ -2.19
VPS13A-210ENST00000471439 COQ5Q5HYK3 327 aa1.39□□□□□ -2.19
VPS13A-210ENST00000471439 PACRGLQ8N7B6 248 aa1.39□□□□□ -2.19
VPS13A-210ENST00000471439 AQP10Q96PS8 301 aa1.39□□□□□ -2.19
VPS13A-210ENST00000471439 PDCD10Q9BUL8 212 aa1.39□□□□□ -2.19
VPS13A-210ENST00000471439 CYSTM1Q9H1C7 97 aa1.39□□□□□ -2.19
VPS13A-210ENST00000471439 TXNL4BQ9NX01 149 aaKnown RBP1.39□□□□□ -2.19
VPS13A-210ENST00000471439 OR5AC2Q9NZP5 309 aa1.39□□□□□ -2.19
VPS13A-210ENST00000471439 C22orf24Q9Y442 160 aa1.39□□□□□ -2.19
VPS13A-210ENST00000471439 ALG5Q9Y673 324 aa1.39□□□□□ -2.19
VPS13A-210ENST00000471439 PXMP4Q9Y6I8 212 aa1.39□□□□□ -2.19
VPS13A-210ENST00000471439 TRBV25-1A0A075B6N4 114 aa1.38□□□□□ -2.19
VPS13A-210ENST00000471439 A8MWV9 139 aa1.38□□□□□ -2.19
VPS13A-210ENST00000471439 H3BQ15 152 aa1.38□□□□□ -2.19
VPS13A-210ENST00000471439 PET100P0DJ07 73 aa1.38□□□□□ -2.19
VPS13A-210ENST00000471439 S100A7P31151 101 aa1.38□□□□□ -2.19
VPS13A-210ENST00000471439 TMEM78Q5T7P6 136 aa1.38□□□□□ -2.19
VPS13A-210ENST00000471439 SCGB1D4Q6XE38 83 aa1.38□□□□□ -2.19
VPS13A-210ENST00000471439 C2orf91Q6ZV80 131 aa1.38□□□□□ -2.19
VPS13A-210ENST00000471439 ACBD7Q8N6N7 88 aa1.38□□□□□ -2.19
VPS13A-210ENST00000471439 PTH2Q96A98 100 aa1.38□□□□□ -2.19
VPS13A-210ENST00000471439 NAA60Q9H7X0 242 aa1.38□□□□□ -2.19
VPS13A-210ENST00000471439 HIGD1AQ9Y241 93 aa1.38□□□□□ -2.19
VPS13A-210ENST00000471439 TRBV10-1A0A0K0K1A3 114 aa1.37□□□□□ -2.19
VPS13A-210ENST00000471439 C11orf86A6NJI1 115 aa1.37□□□□□ -2.19
VPS13A-210ENST00000471439 XCL1P47992 114 aa1.37□□□□□ -2.19
VPS13A-210ENST00000471439 H2BFSP57053 126 aa1.37□□□□□ -2.19
VPS13A-210ENST00000471439 PRLHP81277 87 aa1.37□□□□□ -2.19
VPS13A-210ENST00000471439 NMSQ5H8A3 153 aa1.37□□□□□ -2.19
VPS13A-210ENST00000471439 FAM74A4Q5TZK3 123 aa1.37□□□□□ -2.19
VPS13A-210ENST00000471439 C12orf73Q69YU5 71 aa1.37□□□□□ -2.19
VPS13A-210ENST00000471439 RPL22L1Q6P5R6 122 aaKnown RBP1.37□□□□□ -2.19
VPS13A-210ENST00000471439 ARPINQ7Z6K5 226 aa1.37□□□□□ -2.19
VPS13A-210ENST00000471439 DERL1Q9BUN8 251 aa1.37□□□□□ -2.19
VPS13A-210ENST00000471439 TINCRA0A1B0GVN0 87 aa1.36□□□□□ -2.19
VPS13A-210ENST00000471439 BBIP1A8MTZ0 92 aa1.36□□□□□ -2.19
VPS13A-210ENST00000471439 OR5G3P0C626 314 aa1.36□□□□□ -2.19
VPS13A-210ENST00000471439 IGLC2P0DOY2 106 aa1.36□□□□□ -2.19
VPS13A-210ENST00000471439 TAS2R20P59543 309 aa1.36□□□□□ -2.19
VPS13A-210ENST00000471439 S100A10P60903 97 aa1.36□□□□□ -2.19
VPS13A-210ENST00000471439 SPCS3P61009 180 aa1.36□□□□□ -2.19
VPS13A-210ENST00000471439 IQCJQ1A5X6 159 aa1.36□□□□□ -2.19
VPS13A-210ENST00000471439 SPRR4Q96PI1 79 aa1.36□□□□□ -2.19
VPS13A-210ENST00000471439 TMEM109Q9BVC6 243 aa1.36□□□□□ -2.19
VPS13A-210ENST00000471439 ZNF471Q9BX82 626 aaPredicted RBP1.36□□□□□ -2.19
VPS13A-210ENST00000471439 SPRR2GQ9BYE4 73 aa1.36□□□□□ -2.19
VPS13A-210ENST00000471439 FKBP14Q9NWM8 211 aa1.36□□□□□ -2.19
VPS13A-210ENST00000471439 IGHV1-24A0A0C4DH33 117 aa1.35□□□□□ -2.19
VPS13A-210ENST00000471439 A0A0G2JND7 137 aa1.35□□□□□ -2.19
VPS13A-210ENST00000471439 TRBV6-1A0A0K0K1D8 114 aa1.35□□□□□ -2.19
VPS13A-210ENST00000471439 H3BPC8 53 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms