RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
PRPF40A-206ENST00000471167 DEFB132Q7Z7B7 95 aa2.29□□□□□ -2.04
PRPF40A-206ENST00000471167 ZNF563Q8TA94 476 aa2.29□□□□□ -2.04
PRPF40A-206ENST00000471167 ZFHX2Q9C0A1 2572 aaPredicted RBP2.29□□□□□ -2.04
PRPF40A-206ENST00000471167 IGKV2-40A0A087WW87 121 aaPredicted RBP2.28□□□□□ -2.04
PRPF40A-206ENST00000471167 M0R3E3 92 aa2.28□□□□□ -2.04
PRPF40A-206ENST00000471167 IGKV2D-40P01614 121 aaPredicted RBP2.28□□□□□ -2.04
PRPF40A-206ENST00000471167 C3orf79P0CE67 100 aa2.28□□□□□ -2.04
PRPF40A-206ENST00000471167 FXYD3Q14802 87 aa2.28□□□□□ -2.04
PRPF40A-206ENST00000471167 LINC00322Q6ZN03 302 aaPredicted RBP2.28□□□□□ -2.04
PRPF40A-206ENST00000471167 FDCSPQ8NFU4 85 aa2.28□□□□□ -2.04
PRPF40A-206ENST00000471167 TTTY12Q9BZ98 90 aa2.28□□□□□ -2.04
PRPF40A-206ENST00000471167 LINC01558Q9Y6Z2 57 aa2.28□□□□□ -2.04
PRPF40A-206ENST00000471167 ARFGEF3Q5TH69 2177 aa2.27□□□□□ -2.05
PRPF40A-206ENST00000471167 BAZ2BQ9UIF8 2168 aaKnown RBP2.27□□□□□ -2.05
PRPF40A-206ENST00000471167 TRBV6-5A0A0K0K1A5 114 aa2.27□□□□□ -2.05
PRPF40A-206ENST00000471167 IGKV2-29A2NJV5 120 aaPredicted RBP2.27□□□□□ -2.05
PRPF40A-206ENST00000471167 H3BVH4 76 aa2.27□□□□□ -2.05
PRPF40A-206ENST00000471167 M0R135 149 aa2.27□□□□□ -2.05
PRPF40A-206ENST00000471167 IFI27P40305 119 aaPredicted RBP2.27□□□□□ -2.05
PRPF40A-206ENST00000471167 ATP5EP2Q5VTU8 51 aa2.27□□□□□ -2.05
PRPF40A-206ENST00000471167 BAGE2Q86Y30 109 aa2.27□□□□□ -2.05
PRPF40A-206ENST00000471167 UBE2D4Q9Y2X8 147 aa2.27□□□□□ -2.05
PRPF40A-206ENST00000471167 SPAG17Q6Q759 2223 aa2.27□□□□□ -2.05
PRPF40A-206ENST00000471167 KIF1AQ12756 1690 aa2.27□□□□□ -2.05
PRPF40A-206ENST00000471167 ABCA6Q8N139 1617 aa2.27□□□□□ -2.05
PRPF40A-206ENST00000471167 PRXQ9BXM0 1461 aa2.26□□□□□ -2.05
PRPF40A-206ENST00000471167 A0A087WVE0 104 aa2.26□□□□□ -2.05
PRPF40A-206ENST00000471167 CTXND1A0A1B0GTU2 59 aa2.26□□□□□ -2.05
PRPF40A-206ENST00000471167 UQCR11O14957 56 aa2.26□□□□□ -2.05
PRPF40A-206ENST00000471167 COA5Q86WW8 74 aa2.26□□□□□ -2.05
PRPF40A-206ENST00000471167 C5orf56Q8N8D9 126 aa2.26□□□□□ -2.05
PRPF40A-206ENST00000471167 LINC00304Q8N9R0 145 aa2.26□□□□□ -2.05
PRPF40A-206ENST00000471167 TXNDC17Q9BRA2 123 aa2.26□□□□□ -2.05
PRPF40A-206ENST00000471167 GNG13Q9P2W3 67 aa2.26□□□□□ -2.05
PRPF40A-206ENST00000471167 BRWD1Q9NSI6 2320 aa2.26□□□□□ -2.05
PRPF40A-206ENST00000471167 FANCD2Q9BXW9 1451 aa2.26□□□□□ -2.05
PRPF40A-206ENST00000471167 LOC285556D6RIA3 1793 aa2.26□□□□□ -2.05
PRPF40A-206ENST00000471167 XRN1Q8IZH2 1706 aaKnown RBP2.25□□□□□ -2.05
PRPF40A-206ENST00000471167 A0A087WTM6 91 aa2.25□□□□□ -2.05
PRPF40A-206ENST00000471167 INE1O15225 51 aa2.25□□□□□ -2.05
PRPF40A-206ENST00000471167 FXYD4P59646 89 aa2.25□□□□□ -2.05
PRPF40A-206ENST00000471167 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
PRPF40A-206ENST00000471167 TNRC6BQ9UPQ9 1833 aaKnown RBP2.25□□□□□ -2.05
PRPF40A-206ENST00000471167 SIPA1L3O60292 1781 aaPredicted RBP2.25□□□□□ -2.05
PRPF40A-206ENST00000471167 SHANK1Q9Y566 2161 aa2.25□□□□□ -2.05
PRPF40A-206ENST00000471167 RNF17Q9BXT8 1623 aaKnown RBP2.24□□□□□ -2.05
PRPF40A-206ENST00000471167 PCDH15Q96QU1 1955 aa2.24□□□□□ -2.05
PRPF40A-206ENST00000471167 MGPP08493 103 aa2.24□□□□□ -2.05
PRPF40A-206ENST00000471167 BAGE3Q86Y29 109 aa2.24□□□□□ -2.05
PRPF40A-206ENST00000471167 WFDC6Q9BQY6 131 aa2.24□□□□□ -2.05
PRPF40A-206ENST00000471167 SNURFQ9Y675 71 aa2.24□□□□□ -2.05
PRPF40A-206ENST00000471167 PREX1Q8TCU6 1659 aa2.24□□□□□ -2.05
PRPF40A-206ENST00000471167 ABCA4P78363 2273 aa2.24□□□□□ -2.05
PRPF40A-206ENST00000471167 MYO7BQ6PIF6 2116 aa2.23□□□□□ -2.05
PRPF40A-206ENST00000471167 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.23□□□□□ -2.05
PRPF40A-206ENST00000471167 LOC110117498A0A087WWA1 95 aa2.23□□□□□ -2.05
PRPF40A-206ENST00000471167 M0R2N4 97 aa2.23□□□□□ -2.05
PRPF40A-206ENST00000471167 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
PRPF40A-206ENST00000471167 HCP5Q6MZN7 132 aa2.23□□□□□ -2.05
PRPF40A-206ENST00000471167 ZNF625Q96I27 306 aaPredicted RBP2.23□□□□□ -2.05
PRPF40A-206ENST00000471167 LINC00208Q96KT6 92 aa2.23□□□□□ -2.05
PRPF40A-206ENST00000471167 ADGRB2O60241 1585 aa2.23□□□□□ -2.05
PRPF40A-206ENST00000471167 CDC42BPGQ6DT37 1551 aa2.23□□□□□ -2.05
PRPF40A-206ENST00000471167 NKTRP30414 1462 aaKnown RBP2.22□□□□□ -2.05
PRPF40A-206ENST00000471167 MDC1Q14676 2089 aaKnown RBP2.22□□□□□ -2.05
PRPF40A-206ENST00000471167 CEP170BQ9Y4F5 1589 aaPredicted RBP2.22□□□□□ -2.05
PRPF40A-206ENST00000471167 ALPK2Q86TB3 2170 aa2.22□□□□□ -2.05
PRPF40A-206ENST00000471167 PLCH1Q4KWH8 1693 aa2.22□□□□□ -2.05
PRPF40A-206ENST00000471167 ITSN2Q9NZM3 1697 aa2.22□□□□□ -2.05
PRPF40A-206ENST00000471167 CD163L1Q9NR16 1453 aa2.21□□□□□ -2.06
PRPF40A-206ENST00000471167 PRRC2BQ5JSZ5 2229 aaKnown RBP2.21□□□□□ -2.06
PRPF40A-206ENST00000471167 FXYD6-FXYD2A0A087WZ82 144 aa2.21□□□□□ -2.06
PRPF40A-206ENST00000471167 TRBV7-4A0A0J9YYF1 115 aa2.21□□□□□ -2.06
PRPF40A-206ENST00000471167 GLI2P10070 1586 aa2.21□□□□□ -2.06
PRPF40A-206ENST00000471167 ZNF137PP52743 207 aa2.21□□□□□ -2.06
PRPF40A-206ENST00000471167 DEFB107AQ8IZN7 70 aa2.21□□□□□ -2.06
PRPF40A-206ENST00000471167 TET1Q8NFU7 2136 aa2.21□□□□□ -2.06
PRPF40A-206ENST00000471167 SHROOM3Q8TF72 1996 aa2.21□□□□□ -2.06
PRPF40A-206ENST00000471167 SHPRHQ149N8 1683 aa2.21□□□□□ -2.06
PRPF40A-206ENST00000471167 PIK3C2BO00750 1634 aa2.2□□□□□ -2.06
PRPF40A-206ENST00000471167 FREM1Q5H8C1 2179 aa2.2□□□□□ -2.06
PRPF40A-206ENST00000471167 TRAV1-2A0A0B4J238 106 aa2.2□□□□□ -2.06
PRPF40A-206ENST00000471167 S100A3P33764 101 aa2.2□□□□□ -2.06
PRPF40A-206ENST00000471167 ATXN8Q156A1 80 aa2.2□□□□□ -2.06
PRPF40A-206ENST00000471167 Q6ZRN7 208 aaPredicted RBP2.2□□□□□ -2.06
PRPF40A-206ENST00000471167 FAM103A1Q9BTL3 118 aaKnown RBP2.2□□□□□ -2.06
PRPF40A-206ENST00000471167 LINC00846Q9NV44 126 aa2.2□□□□□ -2.06
PRPF40A-206ENST00000471167 ATP7BP35670 1465 aa2.2□□□□□ -2.06
PRPF40A-206ENST00000471167 RALGAPBQ86X10 1494 aa2.2□□□□□ -2.06
PRPF40A-206ENST00000471167 CRYBG1Q9Y4K1 1723 aa2.2□□□□□ -2.06
PRPF40A-206ENST00000471167 DOCK10Q96BY6 2186 aa2.19□□□□□ -2.06
PRPF40A-206ENST00000471167 ANKRD36A6QL64 1941 aa2.19□□□□□ -2.06
PRPF40A-206ENST00000471167 TRGV2A0A075B6R0 118 aa2.19□□□□□ -2.06
PRPF40A-206ENST00000471167 TRGV1A0A0A0MS02 117 aa2.19□□□□□ -2.06
PRPF40A-206ENST00000471167 A0A1B0GUT8 65 aa2.19□□□□□ -2.06
PRPF40A-206ENST00000471167 IGKV4-1P06312 121 aa2.19□□□□□ -2.06
PRPF40A-206ENST00000471167 Q96NJ1 140 aa2.19□□□□□ -2.06
PRPF40A-206ENST00000471167 SPRR4Q96PI1 79 aa2.19□□□□□ -2.06
PRPF40A-206ENST00000471167 RTTNQ86VV8 2226 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms