RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 NOTCH1P46531 2555 aa5.83□□□□□ -1.48
BRCA1-208ENST00000468300 LAGE3Q14657 143 aa5.82□□□□□ -1.48
BRCA1-208ENST00000468300 PMCHL2Q9BQD1 86 aa5.82□□□□□ -1.48
BRCA1-208ENST00000468300 DKK2Q9UBU2 259 aa5.82□□□□□ -1.48
BRCA1-208ENST00000468300 TP73-AS1Q9UF72 201 aa5.82□□□□□ -1.48
BRCA1-208ENST00000468300 PPP1R17O96001 155 aa5.82□□□□□ -1.48
BRCA1-208ENST00000468300 GAGE13Q4V321 117 aa5.82□□□□□ -1.48
BRCA1-208ENST00000468300 SLC25A29Q8N8R3 303 aa5.82□□□□□ -1.48
BRCA1-208ENST00000468300 DSCR8Q96T75 97 aa5.82□□□□□ -1.48
BRCA1-208ENST00000468300 PAX4O43316 350 aa5.82□□□□□ -1.48
BRCA1-208ENST00000468300 LEPROTL1O95214 131 aa5.82□□□□□ -1.48
BRCA1-208ENST00000468300 HBDP02042 147 aa5.82□□□□□ -1.48
BRCA1-208ENST00000468300 FAM222AQ5U5X8 452 aa5.82□□□□□ -1.48
BRCA1-208ENST00000468300 DAZ4Q86SG3 579 aaKnown RBP5.82□□□□□ -1.48
BRCA1-208ENST00000468300 DAZ3Q9NR90 486 aaKnown RBP5.82□□□□□ -1.48
BRCA1-208ENST00000468300 MIFP14174 115 aa5.81□□□□□ -1.48
BRCA1-208ENST00000468300 SBSPONQ8IVN8 264 aa5.81□□□□□ -1.48
BRCA1-208ENST00000468300 C3orf22Q8N5N4 141 aa5.81□□□□□ -1.48
BRCA1-208ENST00000468300 FAM104AQ969W3 186 aa5.81□□□□□ -1.48
BRCA1-208ENST00000468300 K7EMI3 77 aa5.81□□□□□ -1.48
BRCA1-208ENST00000468300 TOMM6Q96B49 74 aa5.81□□□□□ -1.48
BRCA1-208ENST00000468300 TRAV13-1A0A0B4J241 112 aa5.8□□□□□ -1.48
BRCA1-208ENST00000468300 LOC100131303A0A0U1RQF7 123 aa5.8□□□□□ -1.48
BRCA1-208ENST00000468300 SYS1-DBNDD2H3BUS1 97 aa5.8□□□□□ -1.48
BRCA1-208ENST00000468300 PRKDCP78527 4128 aaKnown RBP5.8□□□□□ -1.48
BRCA1-208ENST00000468300 LYRM9A8MSI8 78 aa5.8□□□□□ -1.48
BRCA1-208ENST00000468300 K7EQD1 137 aa5.8□□□□□ -1.48
BRCA1-208ENST00000468300 DEFB130BP0DP73 79 aa5.8□□□□□ -1.48
BRCA1-208ENST00000468300 DEFB130AP0DP74 79 aa5.8□□□□□ -1.48
BRCA1-208ENST00000468300 Q6Q795 121 aa5.8□□□□□ -1.48
BRCA1-208ENST00000468300 TRGV2A0A075B6R0 118 aa5.79□□□□□ -1.48
BRCA1-208ENST00000468300 TRACP01848 142 aa5.79□□□□□ -1.48
BRCA1-208ENST00000468300 TRBV6-4A0A1B0GX49 114 aa5.79□□□□□ -1.48
BRCA1-208ENST00000468300 I3L3M4 83 aa5.79□□□□□ -1.48
BRCA1-208ENST00000468300 UQCRQO14949 82 aa5.79□□□□□ -1.48
BRCA1-208ENST00000468300 RPL39P62891 51 aaKnown RBP5.79□□□□□ -1.48
BRCA1-208ENST00000468300 ORMDL2Q53FV1 153 aa5.79□□□□□ -1.48
BRCA1-208ENST00000468300 CHCHD7Q9BUK0 85 aa5.79□□□□□ -1.48
BRCA1-208ENST00000468300 IGIPA6NJ69 53 aa5.79□□□□□ -1.48
BRCA1-208ENST00000468300 H3BMG7 143 aa5.79□□□□□ -1.48
BRCA1-208ENST00000468300 INAFM2P0DMQ5 153 aa5.79□□□□□ -1.48
BRCA1-208ENST00000468300 UBE2D3P61077 147 aa5.79□□□□□ -1.48
BRCA1-208ENST00000468300 UBE2D2P62837 147 aa5.79□□□□□ -1.48
BRCA1-208ENST00000468300 LINC01545Q5VT33 79 aa5.79□□□□□ -1.48
BRCA1-208ENST00000468300 NTM-AS1Q6ZSK4 140 aa5.79□□□□□ -1.48
BRCA1-208ENST00000468300 C2orf66Q6UXQ4 117 aa5.78□□□□□ -1.48
BRCA1-208ENST00000468300 TRBV7-3A0A075B6L6 115 aa5.78□□□□□ -1.48
BRCA1-208ENST00000468300 IGHV3-38A0A0C4DH36 116 aa5.78□□□□□ -1.48
BRCA1-208ENST00000468300 TRBV10-1A0A0K0K1A3 114 aa5.78□□□□□ -1.48
BRCA1-208ENST00000468300 IFI27L1Q96BM0 104 aa5.78□□□□□ -1.48
BRCA1-208ENST00000468300 TM2D3Q9BRN9 247 aa5.78□□□□□ -1.48
BRCA1-208ENST00000468300 VSIG2Q96IQ7 327 aa5.77□□□□□ -1.49
BRCA1-208ENST00000468300 Q9H8V8 135 aa5.77□□□□□ -1.49
BRCA1-208ENST00000468300 MGAM2Q2M2H8 2515 aa5.77□□□□□ -1.49
BRCA1-208ENST00000468300 C12orf74Q32Q52 190 aa5.77□□□□□ -1.49
BRCA1-208ENST00000468300 PHLDA1Q8WV24 401 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-208ENST00000468300 MEGF8Q7Z7M0 2845 aa5.77□□□□□ -1.49
BRCA1-208ENST00000468300 RHOHQ15669 191 aa5.77□□□□□ -1.49
BRCA1-208ENST00000468300 C20orf203Q8NBC4 194 aa5.77□□□□□ -1.49
BRCA1-208ENST00000468300 C11orf68Q9H3H3 251 aaKnown RBP5.77□□□□□ -1.49
BRCA1-208ENST00000468300 RBM12B-AS1Q9P1G2 102 aa5.77□□□□□ -1.49
BRCA1-208ENST00000468300 ATP5G1P05496 136 aa5.76□□□□□ -1.49
BRCA1-208ENST00000468300 LINC00526Q96FQ7 95 aa5.76□□□□□ -1.49
BRCA1-208ENST00000468300 HHLA3Q9XRX5 114 aa5.76□□□□□ -1.49
BRCA1-208ENST00000468300 CSMD3Q7Z407 3707 aa5.76□□□□□ -1.49
BRCA1-208ENST00000468300 TRGV4A0A0C4DH28 118 aa5.76□□□□□ -1.49
BRCA1-208ENST00000468300 KRTAP21-3Q3LHN1 58 aa5.76□□□□□ -1.49
BRCA1-208ENST00000468300 TMEM258P61165 79 aa5.75□□□□□ -1.49
BRCA1-208ENST00000468300 OPRPNQ99935 248 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-208ENST00000468300 DYNC2H1Q8NCM8 4307 aaKnown RBP5.75□□□□□ -1.49
BRCA1-208ENST00000468300 GHRHP01286 108 aa5.75□□□□□ -1.49
BRCA1-208ENST00000468300 SPART-AS1P0CW21 52 aa5.75□□□□□ -1.49
BRCA1-208ENST00000468300 SMIM13P0DJ93 91 aa5.75□□□□□ -1.49
BRCA1-208ENST00000468300 PCP2Q8IVA1 136 aa5.75□□□□□ -1.49
BRCA1-208ENST00000468300 ATP6V0E2Q8NHE4 81 aa5.75□□□□□ -1.49
BRCA1-208ENST00000468300 PPDPFLQ8WWR9 84 aa5.75□□□□□ -1.49
BRCA1-208ENST00000468300 LGALS9CQ6DKI2 356 aa5.75□□□□□ -1.49
BRCA1-208ENST00000468300 LYSTQ99698 3801 aa5.74□□□□□ -1.49
BRCA1-208ENST00000468300 A0A0J9YWU9 116 aa5.74□□□□□ -1.49
BRCA1-208ENST00000468300 PAPPA-AS1Q5QFB9 102 aa5.74□□□□□ -1.49
BRCA1-208ENST00000468300 CEMP1Q6PRD7 247 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-208ENST00000468300 SCGB3A1Q96QR1 104 aa5.74□□□□□ -1.49
BRCA1-208ENST00000468300 UBE2D4Q9Y2X8 147 aa5.74□□□□□ -1.49
BRCA1-208ENST00000468300 DNAH7Q8WXX0 4024 aa5.74□□□□□ -1.49
BRCA1-208ENST00000468300 DAD1P61803 113 aa5.74□□□□□ -1.49
BRCA1-208ENST00000468300 RPL36AP83881 106 aaKnown RBP5.74□□□□□ -1.49
BRCA1-208ENST00000468300 RPL36ALQ969Q0 106 aaKnown RBP5.74□□□□□ -1.49
BRCA1-208ENST00000468300 TIMM17AQ99595 171 aa5.74□□□□□ -1.49
BRCA1-208ENST00000468300 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-208ENST00000468300 IGKV2-29A2NJV5 120 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-208ENST00000468300 PRO0255Q9UI72 69 aa5.73□□□□□ -1.49
BRCA1-208ENST00000468300 TRAV12-1A0A0B4J245 112 aa5.73□□□□□ -1.49
BRCA1-208ENST00000468300 IGLV4-69A0A075B6H9 119 aa5.73□□□□□ -1.49
BRCA1-208ENST00000468300 IGLV4-3A0A075B6K6 122 aa5.73□□□□□ -1.49
BRCA1-208ENST00000468300 hADV29S1A0JD25 119 aa5.73□□□□□ -1.49
BRCA1-208ENST00000468300 hDV102S1A0JD36 115 aa5.73□□□□□ -1.49
BRCA1-208ENST00000468300 GYPEP15421 78 aa5.72□□□□□ -1.49
BRCA1-208ENST00000468300 DEFB121Q5J5C9 76 aa5.72□□□□□ -1.49
BRCA1-208ENST00000468300 NFE4Q86UQ8 179 aa5.72□□□□□ -1.49
BRCA1-208ENST00000468300 C8orf87E5RJ46 101 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms